RNA–Protein interactions for RNA: ENST00000273179.9

CTDSPL-201, Transcript of CTD small phosphatase like, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-201ENST00000273179 TCF23Q7RTU1 214 aa7.38□□□□□ -1.23
CTDSPL-201ENST00000273179 SPEM1Q8N4L4 309 aa7.38□□□□□ -1.23
CTDSPL-201ENST00000273179 ZNF236Q9UL36 1845 aa7.37□□□□□ -1.23
CTDSPL-201ENST00000273179 PGPA6NDG6 321 aa7.37□□□□□ -1.23
CTDSPL-201ENST00000273179 MSGN1A6NI15 193 aa7.37□□□□□ -1.23
CTDSPL-201ENST00000273179 CRYM-AS1A6NIL9 109 aa7.37□□□□□ -1.23
CTDSPL-201ENST00000273179 NTN1O95631 604 aa7.37□□□□□ -1.23
CTDSPL-201ENST00000273179 HLA-DQA1P01909 254 aa7.37□□□□□ -1.23
CTDSPL-201ENST00000273179 DUTP33316 252 aaKnown RBP7.37□□□□□ -1.23
CTDSPL-201ENST00000273179 VEGFBP49765 207 aa7.37□□□□□ -1.23
CTDSPL-201ENST00000273179 CLDN2P57739 230 aa7.37□□□□□ -1.23
CTDSPL-201ENST00000273179 ARFRP1Q13795 201 aa7.37□□□□□ -1.23
CTDSPL-201ENST00000273179 C9orf85Q96MD7 179 aa7.37□□□□□ -1.23
CTDSPL-201ENST00000273179 SCN5AQ14524 2016 aa7.37□□□□□ -1.23
CTDSPL-201ENST00000273179 DEFB103AP81534 67 aa7.37□□□□□ -1.23
CTDSPL-201ENST00000273179 NMSQ5H8A3 153 aa7.37□□□□□ -1.23
CTDSPL-201ENST00000273179 DNM1P46Q6ZS02 220 aa7.37□□□□□ -1.23
CTDSPL-201ENST00000273179 GCSAMQ8N6F7 178 aa7.37□□□□□ -1.23
CTDSPL-201ENST00000273179 ZFC3H1O60293 1989 aaKnown RBP7.37□□□□□ -1.23
CTDSPL-201ENST00000273179 VWA8A3KMH1 1905 aa7.37□□□□□ -1.23
CTDSPL-201ENST00000273179 A0A0G2JK05 382 aa7.37□□□□□ -1.23
CTDSPL-201ENST00000273179 C1orf105O95561 183 aa7.37□□□□□ -1.23
CTDSPL-201ENST00000273179 AMY1AP04745 511 aa7.37□□□□□ -1.23
CTDSPL-201ENST00000273179 CTRLP40313 264 aa7.37□□□□□ -1.23
CTDSPL-201ENST00000273179 PMS2CLQ68D20 193 aa7.37□□□□□ -1.23
CTDSPL-201ENST00000273179 AAED1Q7RTV5 226 aa7.37□□□□□ -1.23
CTDSPL-201ENST00000273179 DSCR8Q96T75 97 aa7.37□□□□□ -1.23
CTDSPL-201ENST00000273179 LINC00597Q9H2U6 94 aa7.37□□□□□ -1.23
CTDSPL-201ENST00000273179 TMEM272A0A1B0GTI8 110 aa7.37□□□□□ -1.23
CTDSPL-201ENST00000273179 CCL24O00175 119 aa7.37□□□□□ -1.23
CTDSPL-201ENST00000273179 CELA2AP08217 269 aa7.37□□□□□ -1.23
CTDSPL-201ENST00000273179 ZIC1Q15915 447 aa7.37□□□□□ -1.23
CTDSPL-201ENST00000273179 Q1RN00 199 aa7.37□□□□□ -1.23
CTDSPL-201ENST00000273179 ACP7Q6ZNF0 438 aa7.37□□□□□ -1.23
CTDSPL-201ENST00000273179 ZIC4Q8N9L1 334 aa7.37□□□□□ -1.23
CTDSPL-201ENST00000273179 BMFQ96LC9 184 aa7.37□□□□□ -1.23
CTDSPL-201ENST00000273179 NYNRINQ9P2P1 1898 aaKnown RBP7.36□□□□□ -1.23
CTDSPL-201ENST00000273179 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.36□□□□□ -1.23
CTDSPL-201ENST00000273179 CYP2G1PQ6ZSU1 146 aa7.36□□□□□ -1.23
CTDSPL-201ENST00000273179 C2orf48Q96LS8 159 aa7.36□□□□□ -1.23
CTDSPL-201ENST00000273179 TTTY10Q9BZA0 68 aa7.36□□□□□ -1.23
CTDSPL-201ENST00000273179 CYTL1Q9NRR1 136 aa7.36□□□□□ -1.23
CTDSPL-201ENST00000273179 KLHDC2Q9Y2U9 406 aa7.36□□□□□ -1.23
CTDSPL-201ENST00000273179 DOCK6Q96HP0 2047 aa7.36□□□□□ -1.23
CTDSPL-201ENST00000273179 C5orf49A4QMS7 147 aa7.36□□□□□ -1.23
CTDSPL-201ENST00000273179 CRYGDP07320 174 aa7.36□□□□□ -1.23
CTDSPL-201ENST00000273179 C8orf82Q6P1X6 216 aaPredicted RBP7.36□□□□□ -1.23
CTDSPL-201ENST00000273179 BCL6BQ8N143 479 aaPredicted RBP7.36□□□□□ -1.23
CTDSPL-201ENST00000273179 MDS2Q8NDY4 140 aa7.36□□□□□ -1.23
CTDSPL-201ENST00000273179 IFI27L2Q9H2X8 130 aa7.36□□□□□ -1.23
CTDSPL-201ENST00000273179 ZAR1LA6NP61 321 aa7.36□□□□□ -1.23
CTDSPL-201ENST00000273179 EFNA2O43921 213 aa7.36□□□□□ -1.23
CTDSPL-201ENST00000273179 APCSP02743 223 aa7.36□□□□□ -1.23
CTDSPL-201ENST00000273179 ZNF718Q3SXZ3 478 aa7.36□□□□□ -1.23
CTDSPL-201ENST00000273179 WFDC5Q8TCV5 224 aa7.36□□□□□ -1.23
CTDSPL-201ENST00000273179 FOXB1Q99853 325 aa7.36□□□□□ -1.23
CTDSPL-201ENST00000273179 PAXXQ9BUH6 204 aa7.36□□□□□ -1.23
CTDSPL-201ENST00000273179 LYRM9A8MSI8 78 aa7.35□□□□□ -1.23
CTDSPL-201ENST00000273179 TNFP01375 233 aa7.35□□□□□ -1.23
CTDSPL-201ENST00000273179 CELA2BP08218 269 aaPredicted RBP7.35□□□□□ -1.23
CTDSPL-201ENST00000273179 CD7P09564 240 aa7.35□□□□□ -1.23
CTDSPL-201ENST00000273179 RPL11P62913 178 aaKnown RBP7.35□□□□□ -1.23
CTDSPL-201ENST00000273179 KLF5Q13887 457 aaPredicted RBP7.35□□□□□ -1.23
CTDSPL-201ENST00000273179 DIAPH2-AS1Q14236 149 aa7.35□□□□□ -1.23
CTDSPL-201ENST00000273179 MYO16Q9Y6X6 1858 aa7.35□□□□□ -1.23
CTDSPL-201ENST00000273179 NUPR1O60356 82 aa7.35□□□□□ -1.23
CTDSPL-201ENST00000273179 MNX1P50219 401 aaPredicted RBP7.35□□□□□ -1.23
CTDSPL-201ENST00000273179 ICAM4Q14773 271 aa7.35□□□□□ -1.23
CTDSPL-201ENST00000273179 CST6Q15828 149 aa7.35□□□□□ -1.23
CTDSPL-201ENST00000273179 PRSS41Q7RTY9 318 aa7.35□□□□□ -1.23
CTDSPL-201ENST00000273179 C1QL2Q7Z5L3 287 aa7.35□□□□□ -1.23
CTDSPL-201ENST00000273179 RNF182Q8N6D2 247 aa7.35□□□□□ -1.23
CTDSPL-201ENST00000273179 HIST1H4GQ99525 98 aa7.35□□□□□ -1.23
CTDSPL-201ENST00000273179 LSM2Q9Y333 95 aaKnown RBP7.35□□□□□ -1.23
CTDSPL-201ENST00000273179 PYGO1Q9Y3Y4 419 aa7.35□□□□□ -1.23
CTDSPL-201ENST00000273179 THSD7BQ9C0I4 1608 aa7.35□□□□□ -1.23
CTDSPL-201ENST00000273179 MYLKQ15746 1914 aa7.35□□□□□ -1.23
CTDSPL-201ENST00000273179 SYS1-DBNDD2H3BUS1 97 aa7.35□□□□□ -1.23
CTDSPL-201ENST00000273179 TCRAP04437 139 aa7.35□□□□□ -1.23
CTDSPL-201ENST00000273179 TACSTD2P09758 323 aa7.35□□□□□ -1.23
CTDSPL-201ENST00000273179 GAPTQ8N292 157 aa7.35□□□□□ -1.23
CTDSPL-201ENST00000273179 AMELYQ99218 206 aa7.35□□□□□ -1.23
CTDSPL-201ENST00000273179 GNB1LQ9BYB4 327 aa7.35□□□□□ -1.23
CTDSPL-201ENST00000273179 SAP30LQ9HAJ7 183 aa7.35□□□□□ -1.23
CTDSPL-201ENST00000273179 NLRC5Q86WI3 1866 aa7.35□□□□□ -1.23
CTDSPL-201ENST00000273179 WISP3O95389 354 aaPredicted RBP7.35□□□□□ -1.23
CTDSPL-201ENST00000273179 COX6A1P12074 109 aa7.35□□□□□ -1.23
CTDSPL-201ENST00000273179 INSL3P51460 131 aa7.35□□□□□ -1.23
CTDSPL-201ENST00000273179 APOC4P55056 127 aa7.35□□□□□ -1.23
CTDSPL-201ENST00000273179 PFN3P60673 137 aa7.35□□□□□ -1.23
CTDSPL-201ENST00000273179 RBM3P98179 157 aaKnown RBP7.35□□□□□ -1.23
CTDSPL-201ENST00000273179 ZNF322Q6U7Q0 402 aaPredicted RBP7.35□□□□□ -1.23
CTDSPL-201ENST00000273179 LINC00596Q86U02 117 aa7.35□□□□□ -1.23
CTDSPL-201ENST00000273179 LINC01587Q99440 93 aa7.35□□□□□ -1.23
CTDSPL-201ENST00000273179 MYO9BQ13459 2157 aa7.34□□□□□ -1.23
CTDSPL-201ENST00000273179 PRB4P10163 310 aaPredicted RBP7.34□□□□□ -1.23
CTDSPL-201ENST00000273179 TRIP6Q15654 476 aaKnown RBP7.34□□□□□ -1.23
CTDSPL-201ENST00000273179 DGAT2L6Q6ZPD8 337 aa7.34□□□□□ -1.23
CTDSPL-201ENST00000273179 SSMEM1Q8WWF3 244 aa7.34□□□□□ -1.23
CTDSPL-201ENST00000273179 PLEKHB2Q96CS7 222 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms