RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 MEF2BQ02080 365 aaPredicted RBP7.49□□□□□ -1.21
SSR3-201ENST00000265044 C1orf122Q6ZSJ8 110 aa7.49□□□□□ -1.21
SSR3-201ENST00000265044 CLRN3Q8NCR9 226 aa7.49□□□□□ -1.21
SSR3-201ENST00000265044 C8orf46Q8TAG6 207 aa7.49□□□□□ -1.21
SSR3-201ENST00000265044 CMTM2Q8TAZ6 248 aa7.49□□□□□ -1.21
SSR3-201ENST00000265044 TVP23CQ96ET8 276 aa7.49□□□□□ -1.21
SSR3-201ENST00000265044 MGST2Q99735 147 aa7.49□□□□□ -1.21
SSR3-201ENST00000265044 RNF5Q99942 180 aa7.49□□□□□ -1.21
SSR3-201ENST00000265044 SMCO4Q9NRQ5 59 aa7.49□□□□□ -1.21
SSR3-201ENST00000265044 PITPNC1Q9UKF7 332 aa7.49□□□□□ -1.21
SSR3-201ENST00000265044 TSPAN9O75954 239 aa7.48□□□□□ -1.21
SSR3-201ENST00000265044 HOXB4P17483 251 aaPredicted RBP7.48□□□□□ -1.21
SSR3-201ENST00000265044 AWAT1Q58HT5 328 aa7.48□□□□□ -1.21
SSR3-201ENST00000265044 Q5PR19 223 aa7.48□□□□□ -1.21
SSR3-201ENST00000265044 CYP2G1PQ6ZSU1 146 aa7.48□□□□□ -1.21
SSR3-201ENST00000265044 CBLN2Q8IUK8 224 aa7.48□□□□□ -1.21
SSR3-201ENST00000265044 EIF4E3Q8N5X7 224 aaKnown RBP7.48□□□□□ -1.21
SSR3-201ENST00000265044 C17orf50Q8WW18 174 aa7.48□□□□□ -1.21
SSR3-201ENST00000265044 MANBALQ9NQG1 85 aa7.48□□□□□ -1.21
SSR3-201ENST00000265044 AURKAIP1Q9NWT8 199 aaPredicted RBP7.48□□□□□ -1.21
SSR3-201ENST00000265044 CHD6Q8TD26 2715 aa7.48□□□□□ -1.21
SSR3-201ENST00000265044 F6UZH7 168 aa7.48□□□□□ -1.21
SSR3-201ENST00000265044 HYPMO75409 117 aa7.48□□□□□ -1.21
SSR3-201ENST00000265044 RD3LP0DJH9 198 aa7.48□□□□□ -1.21
SSR3-201ENST00000265044 MGST1P10620 155 aaKnown RBP7.48□□□□□ -1.21
SSR3-201ENST00000265044 ZNF295-AS1Q8N0V1 137 aa7.48□□□□□ -1.21
SSR3-201ENST00000265044 OR5AU1Q8NGC0 362 aa7.48□□□□□ -1.21
SSR3-201ENST00000265044 OR1L6Q8NGR2 347 aa7.48□□□□□ -1.21
SSR3-201ENST00000265044 Q8WTZ3 238 aa7.48□□□□□ -1.21
SSR3-201ENST00000265044 TBL2Q9Y4P3 447 aaKnown RBP7.48□□□□□ -1.21
SSR3-201ENST00000265044 E7EUB6 86 aa7.48□□□□□ -1.21
SSR3-201ENST00000265044 H3BUX3 64 aa7.48□□□□□ -1.21
SSR3-201ENST00000265044 FSTL3O95633 263 aa7.48□□□□□ -1.21
SSR3-201ENST00000265044 AKR1D1P51857 326 aa7.48□□□□□ -1.21
SSR3-201ENST00000265044 RPL11P62913 178 aaKnown RBP7.48□□□□□ -1.21
SSR3-201ENST00000265044 SUMO1P63165 101 aaKnown RBP7.48□□□□□ -1.21
SSR3-201ENST00000265044 LY6G5BQ8NDX9 201 aa7.48□□□□□ -1.21
SSR3-201ENST00000265044 GSX1Q9H4S2 264 aaPredicted RBP7.48□□□□□ -1.21
SSR3-201ENST00000265044 C11orf1Q9H5F2 150 aa7.48□□□□□ -1.21
SSR3-201ENST00000265044 PLA2G2EQ9NZK7 142 aa7.48□□□□□ -1.21
SSR3-201ENST00000265044 H3BQ15 152 aa7.47□□□□□ -1.21
SSR3-201ENST00000265044 GPX4P36969 197 aaPredicted RBP7.47□□□□□ -1.21
SSR3-201ENST00000265044 NECAP1Q8NC96 275 aa7.47□□□□□ -1.21
SSR3-201ENST00000265044 ISOC2Q96AB3 205 aa7.47□□□□□ -1.21
SSR3-201ENST00000265044 TMEM167BQ9NRX6 74 aa7.47□□□□□ -1.21
SSR3-201ENST00000265044 HECTD1Q9ULT8 2610 aa7.47□□□□□ -1.21
SSR3-201ENST00000265044 IGHV3OR16-8A0A075B7F1 116 aa7.47□□□□□ -1.21
SSR3-201ENST00000265044 C7orf77A4D0Y5 90 aa7.47□□□□□ -1.21
SSR3-201ENST00000265044 OR2C1O95371 312 aa7.47□□□□□ -1.21
SSR3-201ENST00000265044 MT-ND4LP03901 98 aa7.47□□□□□ -1.21
SSR3-201ENST00000265044 PF4V1P10720 104 aa7.47□□□□□ -1.21
SSR3-201ENST00000265044 MFAP4P55083 255 aa7.47□□□□□ -1.21
SSR3-201ENST00000265044 HIST2H2BCQ6DN03 193 aa7.47□□□□□ -1.21
SSR3-201ENST00000265044 C16orf82Q7Z2V1 217 aa7.47□□□□□ -1.21
SSR3-201ENST00000265044 KIR3DL3Q8N743 410 aa7.47□□□□□ -1.21
SSR3-201ENST00000265044 OR1P1Q8NH06 330 aa7.47□□□□□ -1.21
SSR3-201ENST00000265044 FLNBO75369 2602 aaKnown RBP7.47□□□□□ -1.21
SSR3-201ENST00000265044 HELZ2Q9BYK8 2649 aaKnown RBP7.47□□□□□ -1.21
SSR3-201ENST00000265044 H3BTX0 84 aa7.47□□□□□ -1.21
SSR3-201ENST00000265044 RPS10P46783 165 aaKnown RBP7.47□□□□□ -1.21
SSR3-201ENST00000265044 RANP62826 216 aaKnown RBP7.47□□□□□ -1.21
SSR3-201ENST00000265044 ZNF90Q03938 601 aa7.47□□□□□ -1.21
SSR3-201ENST00000265044 TMEM241Q24JQ0 296 aa7.47□□□□□ -1.21
SSR3-201ENST00000265044 ATRAIDQ6UW56 229 aa7.47□□□□□ -1.21
SSR3-201ENST00000265044 MIR17HGQ75NE6 70 aa7.47□□□□□ -1.21
SSR3-201ENST00000265044 GATAD1Q8WUU5 269 aa7.47□□□□□ -1.21
SSR3-201ENST00000265044 TBX15Q96SF7 602 aa7.47□□□□□ -1.21
SSR3-201ENST00000265044 SEPSECSQ9HD40 501 aaKnown RBP7.47□□□□□ -1.21
SSR3-201ENST00000265044 IGHV1-69DA0A0B4J2H0 117 aa7.46□□□□□ -1.21
SSR3-201ENST00000265044 IGHV1-69P01742 117 aa7.46□□□□□ -1.21
SSR3-201ENST00000265044 RPL29P47914 159 aaKnown RBP7.46□□□□□ -1.21
SSR3-201ENST00000265044 ZNF137PP52743 207 aa7.46□□□□□ -1.21
SSR3-201ENST00000265044 LINC01356Q8N9X3 169 aa7.46□□□□□ -1.21
SSR3-201ENST00000265044 Q96MF0 132 aa7.46□□□□□ -1.21
SSR3-201ENST00000265044 RNF2Q99496 336 aa7.46□□□□□ -1.21
SSR3-201ENST00000265044 PAXXQ9BUH6 204 aa7.46□□□□□ -1.21
SSR3-201ENST00000265044 FBXL7Q9UJT9 491 aa7.46□□□□□ -1.21
SSR3-201ENST00000265044 ITPR1Q14643 2758 aa7.46□□□□□ -1.22
SSR3-201ENST00000265044 MDFIC2A0A1B0GVS7 189 aa7.46□□□□□ -1.22
SSR3-201ENST00000265044 OVOL3O00110 214 aa7.46□□□□□ -1.22
SSR3-201ENST00000265044 CLN5O75503 358 aa7.46□□□□□ -1.22
SSR3-201ENST00000265044 C8orf88P0DMB2 117 aa7.46□□□□□ -1.22
SSR3-201ENST00000265044 UBE2G1P62253 170 aa7.46□□□□□ -1.22
SSR3-201ENST00000265044 FAM120AOSQ5T036 256 aa7.46□□□□□ -1.22
SSR3-201ENST00000265044 PQLC2Q6ZP29 291 aa7.46□□□□□ -1.22
SSR3-201ENST00000265044 LINC00305Q7Z4B0 112 aa7.46□□□□□ -1.22
SSR3-201ENST00000265044 SMDT1Q9H4I9 107 aa7.46□□□□□ -1.22
SSR3-201ENST00000265044 PRELID1Q9Y255 219 aa7.46□□□□□ -1.22
SSR3-201ENST00000265044 DSCAML1Q8TD84 2053 aa7.46□□□□□ -1.22
SSR3-201ENST00000265044 H7BYZ3 331 aa7.45□□□□□ -1.22
SSR3-201ENST00000265044 NDUFB4O95168 129 aa7.45□□□□□ -1.22
SSR3-201ENST00000265044 IL4P05112 153 aa7.45□□□□□ -1.22
SSR3-201ENST00000265044 HIGD1AQ9Y241 93 aa7.45□□□□□ -1.22
SSR3-201ENST00000265044 F11RQ9Y624 299 aaKnown RBP7.45□□□□□ -1.22
SSR3-201ENST00000265044 CENPVL3A0A0U1RRI6 287 aa7.45□□□□□ -1.22
SSR3-201ENST00000265044 ZNF320A2RRD8 509 aa7.45□□□□□ -1.22
SSR3-201ENST00000265044 SLC25A5P05141 298 aaKnown RBP7.45□□□□□ -1.22
SSR3-201ENST00000265044 TIGITQ495A1 244 aa7.45□□□□□ -1.22
SSR3-201ENST00000265044 SPATA31B1PQ5VZV4 182 aa7.45□□□□□ -1.22
SSR3-201ENST00000265044 ZNF562Q6V9R5 426 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms