RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 SSX8Q7RTT4 187 aa10.76□□□□□ -0.69
NUP54-201ENST00000264883 CHCHD1Q96BP2 118 aaKnown RBP10.76□□□□□ -0.69
NUP54-201ENST00000264883 ATP6V0BQ99437 205 aa10.76□□□□□ -0.69
NUP54-201ENST00000264883 SIGMAR1Q99720 223 aa10.76□□□□□ -0.69
NUP54-201ENST00000264883 GTSF1LQ9H1H1 148 aa10.76□□□□□ -0.69
NUP54-201ENST00000264883 SLC25A10Q9UBX3 287 aaPredicted RBP10.76□□□□□ -0.69
NUP54-201ENST00000264883 MUC6Q6W4X9 2439 aa10.76□□□□□ -0.69
NUP54-201ENST00000264883 PPIAL4EA0A075B759 164 aa10.75□□□□□ -0.69
NUP54-201ENST00000264883 PPIAL4CA0A0B4J2A2 164 aa10.75□□□□□ -0.69
NUP54-201ENST00000264883 C12orf77C9JDV5 145 aa10.75□□□□□ -0.69
NUP54-201ENST00000264883 SNAI2O43623 268 aa10.75□□□□□ -0.69
NUP54-201ENST00000264883 PPIAL4FP0DN26 164 aa10.75□□□□□ -0.69
NUP54-201ENST00000264883 SMAGPQ0VAQ4 97 aa10.75□□□□□ -0.69
NUP54-201ENST00000264883 SCGB2A2Q13296 93 aa10.75□□□□□ -0.69
NUP54-201ENST00000264883 TEPPQ6URK8 271 aa10.75□□□□□ -0.69
NUP54-201ENST00000264883 OR4A5Q8NH83 315 aa10.75□□□□□ -0.69
NUP54-201ENST00000264883 GRAMD2BQ96HH9 432 aa10.75□□□□□ -0.69
NUP54-201ENST00000264883 NAA38Q9BRA0 125 aaKnown RBP10.75□□□□□ -0.69
NUP54-201ENST00000264883 MCRIP2Q9BUT9 160 aaKnown RBP10.75□□□□□ -0.69
NUP54-201ENST00000264883 PLEKHA3Q9HB20 300 aa10.75□□□□□ -0.69
NUP54-201ENST00000264883 ESPL1Q14674 2120 aa10.75□□□□□ -0.69
NUP54-201ENST00000264883 GGTLC3B5MD39 225 aa10.75□□□□□ -0.69
NUP54-201ENST00000264883 H0Y8G0 127 aa10.75□□□□□ -0.69
NUP54-201ENST00000264883 SMPD2O60906 423 aa10.75□□□□□ -0.69
NUP54-201ENST00000264883 FAM53AQ6NSI3 398 aaPredicted RBP10.75□□□□□ -0.69
NUP54-201ENST00000264883 WDR86Q86TI4 376 aa10.75□□□□□ -0.69
NUP54-201ENST00000264883 OR5A1Q8NGJ0 315 aa10.75□□□□□ -0.69
NUP54-201ENST00000264883 PRR7Q8TB68 274 aa10.75□□□□□ -0.69
NUP54-201ENST00000264883 MBD6Q96DN6 1003 aa10.75□□□□□ -0.69
NUP54-201ENST00000264883 PCSK5Q92824 1860 aa10.74□□□□□ -0.69
NUP54-201ENST00000264883 A0A0G2JLM5 398 aa10.74□□□□□ -0.69
NUP54-201ENST00000264883 LINC00205P59089 165 aa10.74□□□□□ -0.69
NUP54-201ENST00000264883 ABHD12Q8N2K0 398 aa10.74□□□□□ -0.69
NUP54-201ENST00000264883 DUSP13Q9UII6 198 aa10.74□□□□□ -0.69
NUP54-201ENST00000264883 CUL9Q8IWT3 2517 aa10.74□□□□□ -0.69
NUP54-201ENST00000264883 LINC00473A8K010 186 aa10.74□□□□□ -0.69
NUP54-201ENST00000264883 IQCF6A8MYZ5 107 aa10.74□□□□□ -0.69
NUP54-201ENST00000264883 ZNF766Q5HY98 468 aa10.74□□□□□ -0.69
NUP54-201ENST00000264883 WDR82Q6UXN9 313 aa10.74□□□□□ -0.69
NUP54-201ENST00000264883 OR4A16Q8NH70 328 aa10.74□□□□□ -0.69
NUP54-201ENST00000264883 VSTM2AQ8TAG5 236 aa10.74□□□□□ -0.69
NUP54-201ENST00000264883 H1FXQ92522 213 aaKnown RBP10.74□□□□□ -0.69
NUP54-201ENST00000264883 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.73□□□□□ -0.69
NUP54-201ENST00000264883 A0A1W2PRE2 83 aa10.73□□□□□ -0.69
NUP54-201ENST00000264883 GFRA3O60609 400 aa10.73□□□□□ -0.69
NUP54-201ENST00000264883 LIPFP07098 398 aa10.73□□□□□ -0.69
NUP54-201ENST00000264883 VDAC2P45880 294 aaPredicted RBP10.73□□□□□ -0.69
NUP54-201ENST00000264883 FOXA3P55318 350 aaPredicted RBP10.73□□□□□ -0.69
NUP54-201ENST00000264883 PRR31Q5SQ13 230 aa10.73□□□□□ -0.69
NUP54-201ENST00000264883 MDP1Q86V88 176 aa10.73□□□□□ -0.69
NUP54-201ENST00000264883 SNRNP40Q96DI7 357 aaKnown RBP10.73□□□□□ -0.69
NUP54-201ENST00000264883 THYN1Q9P016 225 aa10.73□□□□□ -0.69
NUP54-201ENST00000264883 USF3Q68DE3 2245 aa10.73□□□□□ -0.69
NUP54-201ENST00000264883 ADH4P08319 380 aa10.73□□□□□ -0.69
NUP54-201ENST00000264883 OR5AL1P0C617 328 aa10.73□□□□□ -0.69
NUP54-201ENST00000264883 RPL24P83731 157 aaKnown RBP10.73□□□□□ -0.69
NUP54-201ENST00000264883 PRAMEF5Q5TYX0 476 aa10.73□□□□□ -0.69
NUP54-201ENST00000264883 TMEM164Q5U3C3 297 aa10.73□□□□□ -0.69
NUP54-201ENST00000264883 ABHD17BQ5VST6 288 aa10.73□□□□□ -0.69
NUP54-201ENST00000264883 PRAMEF6Q5VXH4 476 aa10.73□□□□□ -0.69
NUP54-201ENST00000264883 FAM231DQ6ZW35 169 aa10.73□□□□□ -0.69
NUP54-201ENST00000264883 OR10W1Q8NGF6 305 aa10.73□□□□□ -0.69
NUP54-201ENST00000264883 PSG11Q9UQ72 335 aa10.73□□□□□ -0.69
NUP54-201ENST00000264883 SPCS1Q9Y6A9 102 aa10.73□□□□□ -0.69
NUP54-201ENST00000264883 DMXL1Q9Y485 3027 aa10.72□□□□□ -0.69
NUP54-201ENST00000264883 PSMB11A5LHX3 300 aa10.72□□□□□ -0.69
NUP54-201ENST00000264883 HIGD1CA8MV81 97 aa10.72□□□□□ -0.69
NUP54-201ENST00000264883 F2RL2O00254 374 aa10.72□□□□□ -0.69
NUP54-201ENST00000264883 CEACAM3P40198 252 aa10.72□□□□□ -0.69
NUP54-201ENST00000264883 FABP6P51161 128 aa10.72□□□□□ -0.69
NUP54-201ENST00000264883 PRR20EP86478 221 aa10.72□□□□□ -0.69
NUP54-201ENST00000264883 PRR20CP86479 221 aa10.72□□□□□ -0.69
NUP54-201ENST00000264883 PRR20DP86480 221 aa10.72□□□□□ -0.69
NUP54-201ENST00000264883 PRR20BP86481 221 aa10.72□□□□□ -0.69
NUP54-201ENST00000264883 PRR20AP86496 221 aa10.72□□□□□ -0.69
NUP54-201ENST00000264883 KIR3DS1Q14943 382 aa10.72□□□□□ -0.69
NUP54-201ENST00000264883 SPINK14Q6IE38 97 aa10.72□□□□□ -0.69
NUP54-201ENST00000264883 ASCL5Q7RTU5 278 aa10.72□□□□□ -0.69
NUP54-201ENST00000264883 ATP5L2Q7Z4Y8 100 aa10.72□□□□□ -0.69
NUP54-201ENST00000264883 DEFB124Q8NES8 71 aa10.72□□□□□ -0.69
NUP54-201ENST00000264883 TTTY12Q9BZ98 90 aa10.72□□□□□ -0.69
NUP54-201ENST00000264883 IDI2-AS1Q9NZ38 188 aa10.72□□□□□ -0.69
NUP54-201ENST00000264883 RIF1Q5UIP0 2472 aaKnown RBP10.72□□□□□ -0.69
NUP54-201ENST00000264883 IGFBP2P18065 325 aa10.72□□□□□ -0.69
NUP54-201ENST00000264883 HSD52Q0P140 79 aa10.72□□□□□ -0.69
NUP54-201ENST00000264883 ZNF503Q96F45 646 aa10.72□□□□□ -0.69
NUP54-201ENST00000264883 PERPQ96FX8 193 aa10.72□□□□□ -0.69
NUP54-201ENST00000264883 HILPDAQ9Y5L2 63 aa10.72□□□□□ -0.69
NUP54-201ENST00000264883 A0A1B0GXF2 115 aa10.71□□□□□ -0.69
NUP54-201ENST00000264883 PSPNO60542 156 aa10.71□□□□□ -0.69
NUP54-201ENST00000264883 RAB9AP51151 201 aa10.71□□□□□ -0.69
NUP54-201ENST00000264883 TPRX1Q8N7U7 411 aa10.71□□□□□ -0.69
NUP54-201ENST00000264883 RAB37Q96AX2 223 aa10.71□□□□□ -0.69
NUP54-201ENST00000264883 HSPB8Q9UJY1 196 aa10.71□□□□□ -0.69
NUP54-201ENST00000264883 TEX48A0A1B0GUV7 120 aa10.7□□□□□ -0.7
NUP54-201ENST00000264883 A0A1W2PPM0 123 aa10.7□□□□□ -0.7
NUP54-201ENST00000264883 SPINT2O43291 252 aa10.7□□□□□ -0.7
NUP54-201ENST00000264883 FTH1P19P0C7X4 201 aa10.7□□□□□ -0.7
NUP54-201ENST00000264883 MAGEA5P43359 124 aa10.7□□□□□ -0.7
NUP54-201ENST00000264883 KIR2DS2P43631 304 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms