RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 Q6P435 159 aa11.58□□□□□ -0.56
CDH3-201ENST00000264012 FAM159AQ6UWV7 190 aa11.58□□□□□ -0.56
CDH3-201ENST00000264012 Q9H3A6 140 aa11.58□□□□□ -0.56
CDH3-201ENST00000264012 PLXNA4Q9HCM2 1894 aa11.58□□□□□ -0.56
CDH3-201ENST00000264012 OR10AG1Q8NH19 301 aa11.57□□□□□ -0.56
CDH3-201ENST00000264012 DCAF16Q9NXF7 216 aa11.57□□□□□ -0.56
CDH3-201ENST00000264012 CADP27708 2225 aa11.57□□□□□ -0.56
CDH3-201ENST00000264012 TRBV6-6A0A0A6YYG2 114 aa11.57□□□□□ -0.56
CDH3-201ENST00000264012 M0R3E3 92 aa11.57□□□□□ -0.56
CDH3-201ENST00000264012 MLNRO43193 412 aa11.57□□□□□ -0.56
CDH3-201ENST00000264012 IGHV3-11P01762 117 aa11.57□□□□□ -0.56
CDH3-201ENST00000264012 RPL23P62829 140 aaKnown RBP11.57□□□□□ -0.56
CDH3-201ENST00000264012 CCL20P78556 96 aa11.57□□□□□ -0.56
CDH3-201ENST00000264012 SPATA45Q537H7 98 aa11.57□□□□□ -0.56
CDH3-201ENST00000264012 TMEM200BQ69YZ2 307 aa11.57□□□□□ -0.56
CDH3-201ENST00000264012 ZNF524Q96C55 264 aa11.57□□□□□ -0.56
CDH3-201ENST00000264012 GPR82Q96P67 336 aa11.57□□□□□ -0.56
CDH3-201ENST00000264012 TANC1Q9C0D5 1861 aa11.57□□□□□ -0.56
CDH3-201ENST00000264012 PROK2Q9HC23 129 aa11.57□□□□□ -0.56
CDH3-201ENST00000264012 IGKV1-5P01602 117 aa11.57□□□□□ -0.56
CDH3-201ENST00000264012 GCSAMLQ5JQS6 135 aa11.57□□□□□ -0.56
CDH3-201ENST00000264012 OR10W1Q8NGF6 305 aa11.57□□□□□ -0.56
CDH3-201ENST00000264012 OR1N2Q8NGR9 330 aa11.57□□□□□ -0.56
CDH3-201ENST00000264012 C10orf55Q5SWW7 151 aa11.56□□□□□ -0.56
CDH3-201ENST00000264012 FAM74A4Q5TZK3 123 aa11.56□□□□□ -0.56
CDH3-201ENST00000264012 TCRBV4S1A1TA0A5B7 111 aa11.56□□□□□ -0.56
CDH3-201ENST00000264012 C1QTNF9BB2RNN3 333 aa11.56□□□□□ -0.56
CDH3-201ENST00000264012 CD5P06127 495 aa11.56□□□□□ -0.56
CDH3-201ENST00000264012 COQ2Q96H96 371 aa11.56□□□□□ -0.56
CDH3-201ENST00000264012 FMC1Q96HJ9 113 aa11.56□□□□□ -0.56
CDH3-201ENST00000264012 IGHV2-26A0A0B4J1V2 119 aa11.56□□□□□ -0.56
CDH3-201ENST00000264012 C5orf52A6NGY3 159 aa11.56□□□□□ -0.56
CDH3-201ENST00000264012 SMAGPQ0VAQ4 97 aa11.56□□□□□ -0.56
CDH3-201ENST00000264012 DOCK9Q9BZ29 2069 aa11.56□□□□□ -0.56
CDH3-201ENST00000264012 ASCL4Q6XD76 172 aa11.56□□□□□ -0.56
CDH3-201ENST00000264012 RNF125Q96EQ8 232 aa11.56□□□□□ -0.56
CDH3-201ENST00000264012 IGHV1-8P0DP01 117 aa11.55□□□□□ -0.56
CDH3-201ENST00000264012 EFNB3Q15768 340 aa11.55□□□□□ -0.56
CDH3-201ENST00000264012 C21orf62-AS1Q17RA5 79 aa11.55□□□□□ -0.56
CDH3-201ENST00000264012 LEMD1Q68G75 181 aa11.55□□□□□ -0.56
CDH3-201ENST00000264012 PVRIGQ6DKI7 326 aa11.55□□□□□ -0.56
CDH3-201ENST00000264012 COLCA1Q6ZS62 124 aa11.55□□□□□ -0.56
CDH3-201ENST00000264012 VSIRQ9H7M9 311 aa11.55□□□□□ -0.56
CDH3-201ENST00000264012 CYTL1Q9NRR1 136 aa11.55□□□□□ -0.56
CDH3-201ENST00000264012 TRBV20OR9-2A0A075B6H5 130 aa11.55□□□□□ -0.56
CDH3-201ENST00000264012 C12orf54Q6X4T0 127 aa11.55□□□□□ -0.56
CDH3-201ENST00000264012 IMMP2LQ96T52 175 aa11.55□□□□□ -0.56
CDH3-201ENST00000264012 COLCA2A8K830 154 aa11.55□□□□□ -0.56
CDH3-201ENST00000264012 COL25A1Q9BXS0 654 aaPredicted RBP11.55□□□□□ -0.56
CDH3-201ENST00000264012 RPP21Q9H633 154 aaKnown RBP11.55□□□□□ -0.56
CDH3-201ENST00000264012 ZNF257Q9Y2Q1 563 aa11.55□□□□□ -0.56
CDH3-201ENST00000264012 FANCMQ8IYD8 2048 aa11.55□□□□□ -0.56
CDH3-201ENST00000264012 A0A1B0GUT8 65 aa11.55□□□□□ -0.56
CDH3-201ENST00000264012 PYYP10082 97 aa11.55□□□□□ -0.56
CDH3-201ENST00000264012 TREML4Q6UXN2 200 aa11.55□□□□□ -0.56
CDH3-201ENST00000264012 MBD3L1Q8WWY6 194 aa11.55□□□□□ -0.56
CDH3-201ENST00000264012 KLK15Q9H2R5 256 aa11.55□□□□□ -0.56
CDH3-201ENST00000264012 IGKV1D-17A0A075B6S4 117 aa11.54□□□□□ -0.56
CDH3-201ENST00000264012 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.54□□□□□ -0.56
CDH3-201ENST00000264012 CIARTQ8N365 385 aaPredicted RBP11.54□□□□□ -0.56
CDH3-201ENST00000264012 LRRK1Q38SD2 2015 aa11.54□□□□□ -0.56
CDH3-201ENST00000264012 DPRXA6NFQ7 191 aa11.54□□□□□ -0.56
CDH3-201ENST00000264012 E9PQ18 207 aa11.54□□□□□ -0.56
CDH3-201ENST00000264012 RHOGP84095 191 aa11.54□□□□□ -0.56
CDH3-201ENST00000264012 AMMECR1LQ6DCA0 310 aa11.54□□□□□ -0.56
CDH3-201ENST00000264012 Q6ZS49 121 aa11.54□□□□□ -0.56
CDH3-201ENST00000264012 FAM169BQ8N8A8 192 aa11.54□□□□□ -0.56
CDH3-201ENST00000264012 OTORQ9NRC9 128 aa11.54□□□□□ -0.56
CDH3-201ENST00000264012 A0A1W2PRE2 83 aa11.54□□□□□ -0.56
CDH3-201ENST00000264012 PF4P02776 101 aa11.54□□□□□ -0.56
CDH3-201ENST00000264012 C1QTNF9P0C862 333 aa11.54□□□□□ -0.56
CDH3-201ENST00000264012 EFNA4P52798 201 aa11.54□□□□□ -0.56
CDH3-201ENST00000264012 GNG5P63218 68 aa11.54□□□□□ -0.56
CDH3-201ENST00000264012 ZNF56Q15929 161 aa11.54□□□□□ -0.56
CDH3-201ENST00000264012 CIDEAO60543 219 aa11.53□□□□□ -0.56
CDH3-201ENST00000264012 RPL24P83731 157 aaKnown RBP11.53□□□□□ -0.56
CDH3-201ENST00000264012 TMEM136Q6ZRR5 245 aa11.53□□□□□ -0.56
CDH3-201ENST00000264012 MUC21A0A0G2JKD1 596 aa11.53□□□□□ -0.56
CDH3-201ENST00000264012 MUC21A0A140T8X8 626 aa11.53□□□□□ -0.56
CDH3-201ENST00000264012 M0R381 172 aa11.53□□□□□ -0.56
CDH3-201ENST00000264012 ZNF324O75467 553 aaPredicted RBP11.53□□□□□ -0.56
CDH3-201ENST00000264012 CFPP27918 469 aa11.53□□□□□ -0.56
CDH3-201ENST00000264012 PLA2G2CQ5R387 149 aa11.53□□□□□ -0.56
CDH3-201ENST00000264012 MUC21Q5SSG8 566 aa11.53□□□□□ -0.56
CDH3-201ENST00000264012 GAFA1Q96PS6 74 aa11.53□□□□□ -0.56
CDH3-201ENST00000264012 MED13LQ71F56 2210 aa11.53□□□□□ -0.56
CDH3-201ENST00000264012 SRSF4Q08170 494 aaKnown RBP11.53□□□□□ -0.56
CDH3-201ENST00000264012 ADIPOQQ15848 244 aa11.53□□□□□ -0.56
CDH3-201ENST00000264012 ATG101Q9BSB4 218 aa11.53□□□□□ -0.56
CDH3-201ENST00000264012 PLXNA2O75051 1894 aa11.53□□□□□ -0.56
CDH3-201ENST00000264012 HELZP42694 1942 aaKnown RBP11.53□□□□□ -0.56
CDH3-201ENST00000264012 LINC00473A8K010 186 aa11.53□□□□□ -0.56
CDH3-201ENST00000264012 AREGP15514 252 aa11.53□□□□□ -0.56
CDH3-201ENST00000264012 PRSS8Q16651 343 aa11.53□□□□□ -0.56
CDH3-201ENST00000264012 C20orf204Q6ZNR8 217 aa11.53□□□□□ -0.56
CDH3-201ENST00000264012 HS3ST6Q96QI5 342 aa11.53□□□□□ -0.56
CDH3-201ENST00000264012 GGTLC1Q9BX51 225 aa11.53□□□□□ -0.56
CDH3-201ENST00000264012 TRAV40A0A0B4J280 105 aa11.52□□□□□ -0.56
CDH3-201ENST00000264012 C9JCJ5 164 aa11.52□□□□□ -0.56
CDH3-201ENST00000264012 RNASE7Q9H1E1 156 aaKnown RBP11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms