RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 ZNF137PP52743 207 aa10.1□□□□□ -0.79
CHMP3-201ENST00000263856 Q0VG73 95 aa10.1□□□□□ -0.79
CHMP3-201ENST00000263856 MBNL2Q5VZF2 373 aaKnown RBP10.1□□□□□ -0.79
CHMP3-201ENST00000263856 STUMQ69YW2 141 aa10.1□□□□□ -0.79
CHMP3-201ENST00000263856 TSKUQ8WUA8 353 aa10.1□□□□□ -0.79
CHMP3-201ENST00000263856 AMMECR1Q9Y4X0 333 aaPredicted RBP10.1□□□□□ -0.79
CHMP3-201ENST00000263856 ZGRF1Q86YA3 2104 aa10.1□□□□□ -0.79
CHMP3-201ENST00000263856 E7EUB6 86 aa10.1□□□□□ -0.79
CHMP3-201ENST00000263856 UPK2O00526 184 aa10.1□□□□□ -0.79
CHMP3-201ENST00000263856 PRCDQ00LT1 54 aa10.1□□□□□ -0.79
CHMP3-201ENST00000263856 C19orf35Q6ZS72 473 aa10.1□□□□□ -0.79
CHMP3-201ENST00000263856 C1orf174Q8IYL3 243 aa10.1□□□□□ -0.79
CHMP3-201ENST00000263856 RNF7Q9UBF6 113 aa10.1□□□□□ -0.79
CHMP3-201ENST00000263856 ACACAQ13085 2346 aa10.09□□□□□ -0.79
CHMP3-201ENST00000263856 RIF1Q5UIP0 2472 aaKnown RBP10.09□□□□□ -0.79
CHMP3-201ENST00000263856 KALRNO60229 2985 aa10.09□□□□□ -0.79
CHMP3-201ENST00000263856 SH2D7A6NKC9 451 aaPredicted RBP10.09□□□□□ -0.79
CHMP3-201ENST00000263856 HLA-DQA1P01909 254 aa10.09□□□□□ -0.79
CHMP3-201ENST00000263856 MT-ND6P03923 174 aa10.09□□□□□ -0.79
CHMP3-201ENST00000263856 SELENOVP59797 346 aa10.09□□□□□ -0.79
CHMP3-201ENST00000263856 UBE2G1P62253 170 aa10.09□□□□□ -0.79
CHMP3-201ENST00000263856 TNXAQ16473 311 aa10.09□□□□□ -0.79
CHMP3-201ENST00000263856 HCP5Q6MZN7 132 aa10.09□□□□□ -0.79
CHMP3-201ENST00000263856 DEFB123Q8N688 67 aa10.09□□□□□ -0.79
CHMP3-201ENST00000263856 STPG4Q8N801 248 aa10.09□□□□□ -0.79
CHMP3-201ENST00000263856 OR5B3Q8NH48 314 aa10.09□□□□□ -0.79
CHMP3-201ENST00000263856 PAXXQ9BUH6 204 aa10.09□□□□□ -0.79
CHMP3-201ENST00000263856 CLEC5AQ9NY25 188 aa10.09□□□□□ -0.79
CHMP3-201ENST00000263856 RAI1Q7Z5J4 1906 aaPredicted RBP10.09□□□□□ -0.79
CHMP3-201ENST00000263856 ERHP84090 104 aaKnown RBP10.09□□□□□ -0.79
CHMP3-201ENST00000263856 TCF24Q7RTU0 167 aa10.09□□□□□ -0.79
CHMP3-201ENST00000263856 ZNF439Q8NDP4 499 aa10.09□□□□□ -0.79
CHMP3-201ENST00000263856 OR1B1Q8NGR6 318 aa10.09□□□□□ -0.79
CHMP3-201ENST00000263856 SLC25A33Q9BSK2 321 aa10.09□□□□□ -0.79
CHMP3-201ENST00000263856 OSTCQ9NRP0 149 aa10.09□□□□□ -0.79
CHMP3-201ENST00000263856 COL27A1Q8IZC6 1860 aaPredicted RBP10.09□□□□□ -0.79
CHMP3-201ENST00000263856 TRAV9-1A0A075B6T8 112 aa10.08□□□□□ -0.8
CHMP3-201ENST00000263856 TRBV9A0A0B4J1U6 114 aa10.08□□□□□ -0.8
CHMP3-201ENST00000263856 ISLRO14498 428 aa10.08□□□□□ -0.8
CHMP3-201ENST00000263856 HYPMO75409 117 aa10.08□□□□□ -0.8
CHMP3-201ENST00000263856 SLC25A5P05141 298 aaKnown RBP10.08□□□□□ -0.8
CHMP3-201ENST00000263856 DIAPH2-AS1Q14236 149 aa10.08□□□□□ -0.8
CHMP3-201ENST00000263856 C10orf113Q5VZT2 155 aa10.08□□□□□ -0.8
CHMP3-201ENST00000263856 LEMD1Q68G75 181 aa10.08□□□□□ -0.8
CHMP3-201ENST00000263856 GUCD1Q96NT3 240 aa10.08□□□□□ -0.8
CHMP3-201ENST00000263856 SLC25A15Q9Y619 301 aa10.08□□□□□ -0.8
CHMP3-201ENST00000263856 ATMQ13315 3056 aa10.08□□□□□ -0.8
CHMP3-201ENST00000263856 DSCAML1Q8TD84 2053 aa10.08□□□□□ -0.8
CHMP3-201ENST00000263856 APOA2P02652 100 aa10.08□□□□□ -0.8
CHMP3-201ENST00000263856 RNASE2P10153 161 aaKnown RBP10.08□□□□□ -0.8
CHMP3-201ENST00000263856 DLX1P56177 255 aa10.08□□□□□ -0.8
CHMP3-201ENST00000263856 OR10X1Q8NGY0 326 aa10.08□□□□□ -0.8
CHMP3-201ENST00000263856 SLC25A10Q9UBX3 287 aaPredicted RBP10.08□□□□□ -0.8
CHMP3-201ENST00000263856 UQCR10Q9UDW1 63 aa10.08□□□□□ -0.8
CHMP3-201ENST00000263856 TACC2O95359 2948 aa10.08□□□□□ -0.8
CHMP3-201ENST00000263856 SPAARA0A1B0GVQ0 90 aa10.08□□□□□ -0.8
CHMP3-201ENST00000263856 IGLV2-8P01709 118 aa10.08□□□□□ -0.8
CHMP3-201ENST00000263856 SP9P0CG40 484 aa10.08□□□□□ -0.8
CHMP3-201ENST00000263856 PPOXP50336 477 aa10.08□□□□□ -0.8
CHMP3-201ENST00000263856 CD69Q07108 199 aa10.08□□□□□ -0.8
CHMP3-201ENST00000263856 AARDQ4LEZ3 155 aa10.08□□□□□ -0.8
CHMP3-201ENST00000263856 UNQ5815/PRO19632Q6UWF5 114 aa10.08□□□□□ -0.8
CHMP3-201ENST00000263856 MCRIP2Q9BUT9 160 aaKnown RBP10.08□□□□□ -0.8
CHMP3-201ENST00000263856 CLEC7AQ9BXN2 247 aa10.08□□□□□ -0.8
CHMP3-201ENST00000263856 TRAV17A0A0B4J275 112 aa10.07□□□□□ -0.8
CHMP3-201ENST00000263856 HIGD1CA8MV81 97 aa10.07□□□□□ -0.8
CHMP3-201ENST00000263856 IGLV1-44P01699 117 aa10.07□□□□□ -0.8
CHMP3-201ENST00000263856 FAM27E3Q08E93 113 aa10.07□□□□□ -0.8
CHMP3-201ENST00000263856 NIT1Q86X76 327 aa10.07□□□□□ -0.8
CHMP3-201ENST00000263856 C18orf32Q8TCD1 76 aa10.07□□□□□ -0.8
CHMP3-201ENST00000263856 ADTRPQ96IZ2 230 aa10.07□□□□□ -0.8
CHMP3-201ENST00000263856 SLC25A2Q9BXI2 301 aa10.07□□□□□ -0.8
CHMP3-201ENST00000263856 SAP30LQ9HAJ7 183 aa10.07□□□□□ -0.8
CHMP3-201ENST00000263856 LAMTOR2Q9Y2Q5 125 aa10.07□□□□□ -0.8
CHMP3-201ENST00000263856 TMEM265A0A087WTH1 108 aa10.07□□□□□ -0.8
CHMP3-201ENST00000263856 IZUMO1RA6ND01 250 aa10.07□□□□□ -0.8
CHMP3-201ENST00000263856 Q8N976 141 aa10.07□□□□□ -0.8
CHMP3-201ENST00000263856 NUP35Q8NFH5 326 aa10.07□□□□□ -0.8
CHMP3-201ENST00000263856 NUDT10Q8NFP7 164 aa10.07□□□□□ -0.8
CHMP3-201ENST00000263856 NUDT11Q96G61 164 aa10.07□□□□□ -0.8
CHMP3-201ENST00000263856 ASCL2Q99929 193 aa10.07□□□□□ -0.8
CHMP3-201ENST00000263856 ZNF883P0CG24 379 aa10.06□□□□□ -0.8
CHMP3-201ENST00000263856 OR10J3Q5JRS4 329 aa10.06□□□□□ -0.8
CHMP3-201ENST00000263856 C1orf162Q8NEQ5 155 aaPredicted RBP10.06□□□□□ -0.8
CHMP3-201ENST00000263856 GAFA1Q96PS6 74 aa10.06□□□□□ -0.8
CHMP3-201ENST00000263856 PLSCR4Q9NRQ2 329 aa10.06□□□□□ -0.8
CHMP3-201ENST00000263856 LY96Q9Y6Y9 160 aa10.06□□□□□ -0.8
CHMP3-201ENST00000263856 A0A1B0GWJ7 208 aa10.06□□□□□ -0.8
CHMP3-201ENST00000263856 PEX7O00628 323 aa10.06□□□□□ -0.8
CHMP3-201ENST00000263856 SLC25A17O43808 307 aa10.06□□□□□ -0.8
CHMP3-201ENST00000263856 IGHG3P01860 377 aa10.06□□□□□ -0.8
CHMP3-201ENST00000263856 IGLC2P0DOY2 106 aa10.06□□□□□ -0.8
CHMP3-201ENST00000263856 IGLC3P0DOY3 106 aa10.06□□□□□ -0.8
CHMP3-201ENST00000263856 ESDP10768 282 aa10.06□□□□□ -0.8
CHMP3-201ENST00000263856 PTTG1IPP53801 180 aa10.06□□□□□ -0.8
CHMP3-201ENST00000263856 LINC00305Q7Z4B0 112 aa10.06□□□□□ -0.8
CHMP3-201ENST00000263856 OR8B2Q96RD0 313 aa10.06□□□□□ -0.8
CHMP3-201ENST00000263856 CHODLQ9H9P2 273 aa10.06□□□□□ -0.8
CHMP3-201ENST00000263856 RAB9BQ9NP90 201 aa10.06□□□□□ -0.8
CHMP3-201ENST00000263856 ARL2-SNX15V9GYD0 113 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms