RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 KIAA0141Q14154 515 aaPredicted RBP14.26□□□□□ -0.13
SDF4-201ENST00000263741 NMSQ5H8A3 153 aa14.26□□□□□ -0.13
SDF4-201ENST00000263741 GGNBP1Q5YKI7 109 aa14.26□□□□□ -0.13
SDF4-201ENST00000263741 C8orf86Q6ZUL3 223 aa14.26□□□□□ -0.13
SDF4-201ENST00000263741 DUX3Q96PT4 197 aa14.26□□□□□ -0.13
SDF4-201ENST00000263741 E5RGE8 158 aa14.26□□□□□ -0.13
SDF4-201ENST00000263741 IGHV3-11P01762 117 aa14.26□□□□□ -0.13
SDF4-201ENST00000263741 OR5B3Q8NH48 314 aa14.26□□□□□ -0.13
SDF4-201ENST00000263741 MYOZ3Q8TDC0 251 aa14.26□□□□□ -0.13
SDF4-201ENST00000263741 FBXL17Q9UF56 701 aa14.26□□□□□ -0.13
SDF4-201ENST00000263741 OR13C7P0DN81 318 aa14.25□□□□□ -0.13
SDF4-201ENST00000263741 LSM10Q969L4 123 aaKnown RBP14.25□□□□□ -0.13
SDF4-201ENST00000263741 LSM5Q9Y4Y9 91 aaKnown RBP14.25□□□□□ -0.13
SDF4-201ENST00000263741 BORCS7-ASMTA0A0B4J1R7 106 aa14.24□□□□□ -0.13
SDF4-201ENST00000263741 SCGB1D2O95969 90 aa14.24□□□□□ -0.13
SDF4-201ENST00000263741 IFNA17P01571 189 aa14.24□□□□□ -0.13
SDF4-201ENST00000263741 FAM219AQ8IW50 185 aa14.24□□□□□ -0.13
SDF4-201ENST00000263741 TTC9CQ8N5M4 171 aa14.24□□□□□ -0.13
SDF4-201ENST00000263741 LRTM2Q8N967 370 aa14.24□□□□□ -0.13
SDF4-201ENST00000263741 TMEM68Q96MH6 324 aa14.24□□□□□ -0.13
SDF4-201ENST00000263741 FKBP11Q9NYL4 201 aa14.24□□□□□ -0.13
SDF4-201ENST00000263741 NPIPB5A8MRT5 1133 aa14.24□□□□□ -0.13
SDF4-201ENST00000263741 HSPE1P61604 102 aaKnown RBP14.24□□□□□ -0.13
SDF4-201ENST00000263741 PRCDQ00LT1 54 aa14.24□□□□□ -0.13
SDF4-201ENST00000263741 TMEM88Q6PEY1 159 aa14.24□□□□□ -0.13
SDF4-201ENST00000263741 ZNF429Q86V71 674 aa14.24□□□□□ -0.13
SDF4-201ENST00000263741 ZNF491Q8N8L2 437 aa14.24□□□□□ -0.13
SDF4-201ENST00000263741 TMEM231Q9H6L2 316 aa14.24□□□□□ -0.13
SDF4-201ENST00000263741 ZNF257Q9Y2Q1 563 aa14.24□□□□□ -0.13
SDF4-201ENST00000263741 M0QZ24 198 aa14.23□□□□□ -0.13
SDF4-201ENST00000263741 OR2J3O76001 311 aa14.23□□□□□ -0.13
SDF4-201ENST00000263741 UBAC2Q8NBM4 344 aa14.23□□□□□ -0.13
SDF4-201ENST00000263741 DMRT1Q9Y5R6 373 aa14.23□□□□□ -0.13
SDF4-201ENST00000263741 S4R3C0 116 aa14.23□□□□□ -0.13
SDF4-201ENST00000263741 RHOGP84095 191 aa14.22□□□□□ -0.13
SDF4-201ENST00000263741 SRSF3P84103 164 aaKnown RBP14.22□□□□□ -0.13
SDF4-201ENST00000263741 PLEKHA3Q9HB20 300 aa14.22□□□□□ -0.13
SDF4-201ENST00000263741 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.22□□□□□ -0.13
SDF4-201ENST00000263741 SFTA3P0C7M3 94 aa14.22□□□□□ -0.13
SDF4-201ENST00000263741 Q6ZRG5 221 aa14.22□□□□□ -0.13
SDF4-201ENST00000263741 CBLN2Q8IUK8 224 aa14.22□□□□□ -0.13
SDF4-201ENST00000263741 CRYGCP07315 174 aa14.21□□□□□ -0.13
SDF4-201ENST00000263741 DEFA4P12838 97 aa14.21□□□□□ -0.13
SDF4-201ENST00000263741 HOXA1P49639 335 aaPredicted RBP14.21□□□□□ -0.13
SDF4-201ENST00000263741 MFAP2P55001 183 aa14.21□□□□□ -0.13
SDF4-201ENST00000263741 BTNL8Q6UX41 500 aa14.21□□□□□ -0.13
SDF4-201ENST00000263741 UBE2E2Q96LR5 201 aa14.21□□□□□ -0.13
SDF4-201ENST00000263741 FANCD2OSQ96PS1 177 aa14.21□□□□□ -0.13
SDF4-201ENST00000263741 SAV1Q9H4B6 383 aaPredicted RBP14.21□□□□□ -0.13
SDF4-201ENST00000263741 MGAM2Q2M2H8 2515 aa14.21□□□□□ -0.14
SDF4-201ENST00000263741 DUXBA0A1W2PPF3 345 aa14.21□□□□□ -0.14
SDF4-201ENST00000263741 H3BUA1 57 aa14.21□□□□□ -0.14
SDF4-201ENST00000263741 CDX1P47902 265 aaPredicted RBP14.21□□□□□ -0.14
SDF4-201ENST00000263741 ETV3LQ6ZN32 361 aa14.21□□□□□ -0.14
SDF4-201ENST00000263741 NPBWR1P48145 328 aa14.2□□□□□ -0.14
SDF4-201ENST00000263741 C4orf3Q8WVX3 66 aa14.2□□□□□ -0.14
SDF4-201ENST00000263741 RAX2Q96IS3 184 aa14.2□□□□□ -0.14
SDF4-201ENST00000263741 SRSF8Q9BRL6 282 aaKnown RBP14.2□□□□□ -0.14
SDF4-201ENST00000263741 TMED3Q9Y3Q3 217 aa14.2□□□□□ -0.14
SDF4-201ENST00000263741 CMYA5Q8N3K9 4069 aa14.2□□□□□ -0.14
SDF4-201ENST00000263741 IGHV3-23P01764 117 aa14.19□□□□□ -0.14
SDF4-201ENST00000263741 CD5P06127 495 aa14.19□□□□□ -0.14
SDF4-201ENST00000263741 SEC11BP0C7V7 166 aa14.19□□□□□ -0.14
SDF4-201ENST00000263741 RAB5CP51148 216 aa14.19□□□□□ -0.14
SDF4-201ENST00000263741 AARDQ4LEZ3 155 aa14.19□□□□□ -0.14
SDF4-201ENST00000263741 SMIM3Q9BZL3 60 aa14.19□□□□□ -0.14
SDF4-201ENST00000263741 FBXL7Q9UJT9 491 aa14.19□□□□□ -0.14
SDF4-201ENST00000263741 NOTCH3Q9UM47 2321 aa14.19□□□□□ -0.14
SDF4-201ENST00000263741 IGLV11-55A0A075B6I3 123 aa14.19□□□□□ -0.14
SDF4-201ENST00000263741 TRBV9A0A0B4J1U6 114 aa14.19□□□□□ -0.14
SDF4-201ENST00000263741 NDUFB8O95169 186 aa14.19□□□□□ -0.14
SDF4-201ENST00000263741 MBPP02686 304 aaPredicted RBP14.19□□□□□ -0.14
SDF4-201ENST00000263741 P2RY1P47900 373 aa14.19□□□□□ -0.14
SDF4-201ENST00000263741 C15orf32Q32M92 178 aa14.19□□□□□ -0.14
SDF4-201ENST00000263741 OR2C3Q8N628 320 aa14.19□□□□□ -0.14
SDF4-201ENST00000263741 P2RX4Q99571 388 aa14.19□□□□□ -0.14
SDF4-201ENST00000263741 F11RQ9Y624 299 aaKnown RBP14.19□□□□□ -0.14
SDF4-201ENST00000263741 IGHV3-21A0A0B4J1V1 117 aa14.18□□□□□ -0.14
SDF4-201ENST00000263741 A0A1B0GU03 582 aa14.18□□□□□ -0.14
SDF4-201ENST00000263741 CEBPZOSA8MTT3 80 aa14.18□□□□□ -0.14
SDF4-201ENST00000263741 TRBV12-3P01733 135 aa14.18□□□□□ -0.14
SDF4-201ENST00000263741 SPCS3P61009 180 aa14.18□□□□□ -0.14
SDF4-201ENST00000263741 OR4F17Q8NGA8 305 aa14.18□□□□□ -0.14
SDF4-201ENST00000263741 SVIPQ8NHG7 77 aa14.18□□□□□ -0.14
SDF4-201ENST00000263741 OR4F4Q96R69 305 aa14.18□□□□□ -0.14
SDF4-201ENST00000263741 ARV1Q9H2C2 271 aa14.18□□□□□ -0.14
SDF4-201ENST00000263741 BIN3Q9NQY0 253 aa14.18□□□□□ -0.14
SDF4-201ENST00000263741 STRAPQ9Y3F4 350 aaKnown RBP14.18□□□□□ -0.14
SDF4-201ENST00000263741 PF4P02776 101 aa14.18□□□□□ -0.14
SDF4-201ENST00000263741 LGALS1P09382 135 aaKnown RBP14.18□□□□□ -0.14
SDF4-201ENST00000263741 TNFRSF9Q07011 255 aa14.18□□□□□ -0.14
SDF4-201ENST00000263741 PEA15Q15121 130 aa14.18□□□□□ -0.14
SDF4-201ENST00000263741 LINC00518Q8N0U6 118 aa14.18□□□□□ -0.14
SDF4-201ENST00000263741 PITX3O75364 302 aa14.17□□□□□ -0.14
SDF4-201ENST00000263741 SLC25A24Q6NUK1 477 aa14.17□□□□□ -0.14
SDF4-201ENST00000263741 NECAP1Q8NC96 275 aa14.17□□□□□ -0.14
SDF4-201ENST00000263741 LYPD6BQ8NI32 183 aa14.17□□□□□ -0.14
SDF4-201ENST00000263741 GINS3Q9BRX5 216 aa14.17□□□□□ -0.14
SDF4-201ENST00000263741 MAGT1Q9H0U3 335 aa14.17□□□□□ -0.14
SDF4-201ENST00000263741 RBKSQ9H477 322 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms