RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 ARHGEF17Q96PE2 2063 aaPredicted RBP10.06□□□□□ -0.8
SMG6-201ENST00000263073 TP53BP1Q12888 1972 aaPredicted RBP10.06□□□□□ -0.8
SMG6-201ENST00000263073 A0A1W2PRX2 142 aa10.06□□□□□ -0.8
SMG6-201ENST00000263073 PRTN3P24158 256 aa10.06□□□□□ -0.8
SMG6-201ENST00000263073 ZNF138P52744 262 aa10.06□□□□□ -0.8
SMG6-201ENST00000263073 SRSF4Q08170 494 aaKnown RBP10.06□□□□□ -0.8
SMG6-201ENST00000263073 MAJINQ3KP22 176 aa10.06□□□□□ -0.8
SMG6-201ENST00000263073 OR10J3Q5JRS4 329 aa10.06□□□□□ -0.8
SMG6-201ENST00000263073 C1orf174Q8IYL3 243 aa10.06□□□□□ -0.8
SMG6-201ENST00000263073 PDCD11Q14690 1871 aaKnown RBP10.06□□□□□ -0.8
SMG6-201ENST00000263073 LYNX1G3V0Z9 82 aa10.05□□□□□ -0.8
SMG6-201ENST00000263073 LYNX1P0DP58 116 aa10.05□□□□□ -0.8
SMG6-201ENST00000263073 MYOD1P15172 320 aa10.05□□□□□ -0.8
SMG6-201ENST00000263073 ADCYAP1P18509 176 aa10.05□□□□□ -0.8
SMG6-201ENST00000263073 SUPT4H1P63272 117 aaKnown RBP10.05□□□□□ -0.8
SMG6-201ENST00000263073 PAX2Q02962 417 aa10.05□□□□□ -0.8
SMG6-201ENST00000263073 Q6ZT83 130 aa10.05□□□□□ -0.8
SMG6-201ENST00000263073 SEMA5BQ9P283 1151 aa10.05□□□□□ -0.8
SMG6-201ENST00000263073 A0A1B0GUS0 222 aa10.05□□□□□ -0.8
SMG6-201ENST00000263073 HOXA3O43365 443 aaPredicted RBP10.05□□□□□ -0.8
SMG6-201ENST00000263073 SAMD5Q5TGI4 173 aa10.05□□□□□ -0.8
SMG6-201ENST00000263073 STPG1Q5TH74 334 aa10.05□□□□□ -0.8
SMG6-201ENST00000263073 GP6Q9HCN6 339 aa10.05□□□□□ -0.8
SMG6-201ENST00000263073 C21orf62Q9NYP8 219 aa10.05□□□□□ -0.8
SMG6-201ENST00000263073 EPDR1Q9UM22 224 aa10.05□□□□□ -0.8
SMG6-201ENST00000263073 CD300EQ496F6 205 aaPredicted RBP10.05□□□□□ -0.8
SMG6-201ENST00000263073 WBP1Q96G27 269 aa10.05□□□□□ -0.8
SMG6-201ENST00000263073 PRDM6Q9NQX0 595 aa10.05□□□□□ -0.8
SMG6-201ENST00000263073 ICE1Q9Y2F5 2266 aa10.05□□□□□ -0.8
SMG6-201ENST00000263073 BSPH1Q075Z2 132 aa10.05□□□□□ -0.8
SMG6-201ENST00000263073 IGHV2OR16-5A0A0B4J2B6 119 aa10.05□□□□□ -0.8
SMG6-201ENST00000263073 IGKV1-12A0A0C4DH73 117 aa10.05□□□□□ -0.8
SMG6-201ENST00000263073 A0A1W2PRE2 83 aa10.05□□□□□ -0.8
SMG6-201ENST00000263073 IGKV1D-12P01611 117 aa10.05□□□□□ -0.8
SMG6-201ENST00000263073 TPTE2P1Q5T6R2 138 aa10.05□□□□□ -0.8
SMG6-201ENST00000263073 C11orf68Q9H3H3 251 aaKnown RBP10.05□□□□□ -0.8
SMG6-201ENST00000263073 CACNA1DQ01668 2161 aa10.04□□□□□ -0.8
SMG6-201ENST00000263073 MPDZO75970 2070 aa10.04□□□□□ -0.8
SMG6-201ENST00000263073 LURAP1LQ8IV03 231 aa10.04□□□□□ -0.8
SMG6-201ENST00000263073 ARPC1AQ92747 370 aa10.04□□□□□ -0.8
SMG6-201ENST00000263073 WDR90Q96KV7 1748 aa10.04□□□□□ -0.8
SMG6-201ENST00000263073 SMAD7O15105 426 aaKnown RBP10.04□□□□□ -0.8
SMG6-201ENST00000263073 HOXB1P14653 301 aaPredicted RBP10.04□□□□□ -0.8
SMG6-201ENST00000263073 PPP1R27Q86WC6 154 aa10.04□□□□□ -0.8
SMG6-201ENST00000263073 TEX29Q8N6K0 151 aa10.04□□□□□ -0.8
SMG6-201ENST00000263073 OSR1Q8TAX0 266 aaPredicted RBP10.04□□□□□ -0.8
SMG6-201ENST00000263073 MST1P26927 711 aa10.04□□□□□ -0.8
SMG6-201ENST00000263073 TMEM155Q4W5P6 130 aa10.04□□□□□ -0.8
SMG6-201ENST00000263073 C10orf55Q5SWW7 151 aa10.04□□□□□ -0.8
SMG6-201ENST00000263073 GTSF1LQ9H1H1 148 aa10.04□□□□□ -0.8
SMG6-201ENST00000263073 LINC00527Q9UJ94 153 aa10.04□□□□□ -0.8
SMG6-201ENST00000263073 NYNRINQ9P2P1 1898 aaKnown RBP10.04□□□□□ -0.8
SMG6-201ENST00000263073 ZNF815PA8K554 130 aa10.04□□□□□ -0.8
SMG6-201ENST00000263073 EREGO14944 169 aa10.04□□□□□ -0.8
SMG6-201ENST00000263073 DLEU1O43261 78 aa10.04□□□□□ -0.8
SMG6-201ENST00000263073 CD7P09564 240 aa10.04□□□□□ -0.8
SMG6-201ENST00000263073 PSG1P11464 419 aa10.04□□□□□ -0.8
SMG6-201ENST00000263073 IGKV2-40A0A087WW87 121 aaPredicted RBP10.03□□□□□ -0.8
SMG6-201ENST00000263073 NPIPB13A6NJU9 1138 aa10.03□□□□□ -0.8
SMG6-201ENST00000263073 NPIPB5A8MRT5 1133 aa10.03□□□□□ -0.8
SMG6-201ENST00000263073 TNFSF13O75888 250 aa10.03□□□□□ -0.8
SMG6-201ENST00000263073 IGKV2D-40P01614 121 aaPredicted RBP10.03□□□□□ -0.8
SMG6-201ENST00000263073 EXOC3-AS1Q8N2X6 119 aa10.03□□□□□ -0.8
SMG6-201ENST00000263073 ZNF664Q8N3J9 261 aa10.03□□□□□ -0.8
SMG6-201ENST00000263073 C15orf61A6NNL5 157 aa10.03□□□□□ -0.8
SMG6-201ENST00000263073 HBDP02042 147 aa10.03□□□□□ -0.8
SMG6-201ENST00000263073 ZNF497Q6ZNH5 498 aa10.03□□□□□ -0.8
SMG6-201ENST00000263073 IGKCP01834 107 aa10.03□□□□□ -0.8
SMG6-201ENST00000263073 MORN2Q502X0 79 aa10.03□□□□□ -0.8
SMG6-201ENST00000263073 OR2K2Q8NGT1 345 aa10.03□□□□□ -0.8
SMG6-201ENST00000263073 GNB1LQ9BYB4 327 aa10.03□□□□□ -0.8
SMG6-201ENST00000263073 CHTOPQ9Y3Y2 248 aaKnown RBP10.03□□□□□ -0.8
SMG6-201ENST00000263073 RBBP6Q7Z6E9 1792 aaKnown RBP10.03□□□□□ -0.8
SMG6-201ENST00000263073 UPK2O00526 184 aa10.03□□□□□ -0.8
SMG6-201ENST00000263073 NDUFA2O43678 99 aa10.03□□□□□ -0.8
SMG6-201ENST00000263073 DPM2O94777 84 aa10.03□□□□□ -0.8
SMG6-201ENST00000263073 FOXG1P55316 489 aaPredicted RBP10.03□□□□□ -0.8
SMG6-201ENST00000263073 TIMM23BQ5SRD1 257 aa10.03□□□□□ -0.8
SMG6-201ENST00000263073 CIARTQ8N365 385 aaPredicted RBP10.03□□□□□ -0.8
SMG6-201ENST00000263073 ZNF479Q96JC4 524 aa10.03□□□□□ -0.8
SMG6-201ENST00000263073 C2orf88Q9BSF0 95 aa10.03□□□□□ -0.8
SMG6-201ENST00000263073 SCRT1Q9BWW7 348 aa10.03□□□□□ -0.8
SMG6-201ENST00000263073 IGKV1-27A0A075B6S5 117 aa10.03□□□□□ -0.8
SMG6-201ENST00000263073 TRAV3A0A0B4J244 114 aa10.03□□□□□ -0.8
SMG6-201ENST00000263073 HTN3P15516 51 aa10.03□□□□□ -0.8
SMG6-201ENST00000263073 ATP5J2P56134 94 aa10.03□□□□□ -0.8
SMG6-201ENST00000263073 TMEM101Q96IK0 257 aa10.03□□□□□ -0.8
SMG6-201ENST00000263073 PIMREGQ9BSJ6 248 aa10.03□□□□□ -0.8
SMG6-201ENST00000263073 SEPSECSQ9HD40 501 aaKnown RBP10.03□□□□□ -0.8
SMG6-201ENST00000263073 ZNF318Q5VUA4 2279 aa10.02□□□□□ -0.8
SMG6-201ENST00000263073 TRAV8-4A0A0B4J246 113 aa10.02□□□□□ -0.8
SMG6-201ENST00000263073 MPV17L2Q567V2 206 aa10.02□□□□□ -0.8
SMG6-201ENST00000263073 LOXL4Q96JB6 756 aa10.02□□□□□ -0.8
SMG6-201ENST00000263073 OTORQ9NRC9 128 aa10.02□□□□□ -0.8
SMG6-201ENST00000263073 IGHV3-73A0A0B4J1V6 119 aa10.02□□□□□ -0.81
SMG6-201ENST00000263073 A0A1W2PR77 199 aa10.02□□□□□ -0.81
SMG6-201ENST00000263073 PRR19A6NJB7 356 aa10.02□□□□□ -0.81
SMG6-201ENST00000263073 IFNL4K9M1U5 179 aa10.02□□□□□ -0.81
SMG6-201ENST00000263073 SELLP14151 372 aa10.02□□□□□ -0.81
SMG6-201ENST00000263073 ID3Q02535 119 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms