RNA–Protein interactions for RNA: ENST00000261965.7

TUBGCP3-201, Transcript of tubulin gamma complex associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBGCP3, Length 3,899 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3-201ENST00000261965 FAM214BQ7L5A3 538 aa11.55□□□□□ -0.56
TUBGCP3-201ENST00000261965 CD177Q8N6Q3 437 aa11.55□□□□□ -0.56
TUBGCP3-201ENST00000261965 CT45A3Q8NHU0 189 aa11.55□□□□□ -0.56
TUBGCP3-201ENST00000261965 WNK1Q9H4A3 2382 aa11.55□□□□□ -0.56
TUBGCP3-201ENST00000261965 TNRC18O15417 2968 aaPredicted RBP11.55□□□□□ -0.56
TUBGCP3-201ENST00000261965 TRBV6-6A0A0A6YYG2 114 aa11.55□□□□□ -0.56
TUBGCP3-201ENST00000261965 OR4C46A6NHA9 309 aa11.55□□□□□ -0.56
TUBGCP3-201ENST00000261965 MKRN2OSH3BPM6 223 aa11.55□□□□□ -0.56
TUBGCP3-201ENST00000261965 KLF3P57682 345 aaPredicted RBP11.55□□□□□ -0.56
TUBGCP3-201ENST00000261965 ERVK11-1P61568 191 aa11.55□□□□□ -0.56
TUBGCP3-201ENST00000261965 ALKBH7Q9BT30 221 aaPredicted RBP11.55□□□□□ -0.56
TUBGCP3-201ENST00000261965 PPIAL4DF5H284 164 aa11.54□□□□□ -0.56
TUBGCP3-201ENST00000261965 BPIFB3P59826 476 aa11.54□□□□□ -0.56
TUBGCP3-201ENST00000261965 C9orf106Q8NAJ2 232 aa11.54□□□□□ -0.56
TUBGCP3-201ENST00000261965 FDCSPQ8NFU4 85 aa11.54□□□□□ -0.56
TUBGCP3-201ENST00000261965 ZPBPQ9BS86 351 aa11.54□□□□□ -0.56
TUBGCP3-201ENST00000261965 HCFC1P51610 2035 aa11.54□□□□□ -0.56
TUBGCP3-201ENST00000261965 TRAV8-1A0A0A6YYK1 113 aa11.54□□□□□ -0.56
TUBGCP3-201ENST00000261965 ZNF324O75467 553 aaPredicted RBP11.54□□□□□ -0.56
TUBGCP3-201ENST00000261965 ADH4P08319 380 aa11.54□□□□□ -0.56
TUBGCP3-201ENST00000261965 MPV17L2Q567V2 206 aa11.54□□□□□ -0.56
TUBGCP3-201ENST00000261965 ZBTB34Q8NCN2 500 aa11.54□□□□□ -0.56
TUBGCP3-201ENST00000261965 TIMM9Q9Y5J7 89 aa11.54□□□□□ -0.56
TUBGCP3-201ENST00000261965 CCL3L1P16619 93 aa11.54□□□□□ -0.56
TUBGCP3-201ENST00000261965 DUTP33316 252 aaKnown RBP11.54□□□□□ -0.56
TUBGCP3-201ENST00000261965 RIPPLY3P57055 190 aa11.54□□□□□ -0.56
TUBGCP3-201ENST00000261965 CORTO00230 105 aa11.53□□□□□ -0.56
TUBGCP3-201ENST00000261965 HLA-DQA1P01909 254 aa11.53□□□□□ -0.56
TUBGCP3-201ENST00000261965 C18orf15Q96N68 181 aa11.53□□□□□ -0.56
TUBGCP3-201ENST00000261965 GMPPAQ96IJ6 420 aaPredicted RBP11.53□□□□□ -0.56
TUBGCP3-201ENST00000261965 GP6Q9HCN6 339 aa11.53□□□□□ -0.56
TUBGCP3-201ENST00000261965 CSPG4Q6UVK1 2322 aa11.53□□□□□ -0.56
TUBGCP3-201ENST00000261965 AMY1AP04745 511 aa11.53□□□□□ -0.56
TUBGCP3-201ENST00000261965 C8orf88P0DMB2 117 aa11.53□□□□□ -0.56
TUBGCP3-201ENST00000261965 C19orf35Q6ZS72 473 aa11.53□□□□□ -0.56
TUBGCP3-201ENST00000261965 IGHV3OR16-13A0A075B7E8 117 aa11.52□□□□□ -0.56
TUBGCP3-201ENST00000261965 IGHV3-74A0A0B4J1X5 117 aa11.52□□□□□ -0.56
TUBGCP3-201ENST00000261965 SS18L1O75177 396 aaPredicted RBP11.52□□□□□ -0.56
TUBGCP3-201ENST00000261965 STAG3L2P0CL84 134 aa11.52□□□□□ -0.56
TUBGCP3-201ENST00000261965 STAG3L3P0CL85 134 aa11.52□□□□□ -0.56
TUBGCP3-201ENST00000261965 CT45A10P0DMU9 189 aa11.52□□□□□ -0.56
TUBGCP3-201ENST00000261965 CLEC7AQ9BXN2 247 aa11.52□□□□□ -0.56
TUBGCP3-201ENST00000261965 PCSK5Q92824 1860 aa11.52□□□□□ -0.57
TUBGCP3-201ENST00000261965 SAA2-SAA4A0A096LPE2 208 aa11.52□□□□□ -0.57
TUBGCP3-201ENST00000261965 GPX1P07203 203 aa11.52□□□□□ -0.57
TUBGCP3-201ENST00000261965 SAA2P0DJI9 122 aaPredicted RBP11.52□□□□□ -0.57
TUBGCP3-201ENST00000261965 SUB1P53999 127 aaKnown RBP eCLIP11.52□□□□□ -0.57
TUBGCP3-201ENST00000261965 SLC35E4Q6ICL7 350 aa11.52□□□□□ -0.57
TUBGCP3-201ENST00000261965 C11orf53Q8IXP5 236 aa11.52□□□□□ -0.57
TUBGCP3-201ENST00000261965 CDC42EP3Q9UKI2 254 aa11.52□□□□□ -0.57
TUBGCP3-201ENST00000261965 CUL9Q8IWT3 2517 aa11.52□□□□□ -0.57
TUBGCP3-201ENST00000261965 IQCF6A8MYZ5 107 aa11.52□□□□□ -0.57
TUBGCP3-201ENST00000261965 C21orf140B9A014 251 aa11.52□□□□□ -0.57
TUBGCP3-201ENST00000261965 MGST3O14880 152 aa11.52□□□□□ -0.57
TUBGCP3-201ENST00000261965 ZNF134P52741 427 aa11.52□□□□□ -0.57
TUBGCP3-201ENST00000261965 FAM168AQ92567 244 aa11.52□□□□□ -0.57
TUBGCP3-201ENST00000261965 TMEM191AQ9H0A3 160 aa11.52□□□□□ -0.57
TUBGCP3-201ENST00000261965 ASCL3Q9NQ33 180 aa11.52□□□□□ -0.57
TUBGCP3-201ENST00000261965 ATMQ13315 3056 aa11.51□□□□□ -0.57
TUBGCP3-201ENST00000261965 SPAARA0A1B0GVQ0 90 aa11.51□□□□□ -0.57
TUBGCP3-201ENST00000261965 CGB1A6NKQ9 187 aa11.51□□□□□ -0.57
TUBGCP3-201ENST00000261965 MPDU1O75352 247 aa11.51□□□□□ -0.57
TUBGCP3-201ENST00000261965 IGKV1-16P04430 117 aa11.51□□□□□ -0.57
TUBGCP3-201ENST00000261965 MZT1Q08AG7 82 aa11.51□□□□□ -0.57
TUBGCP3-201ENST00000261965 A0A087X0K7 114 aa11.51□□□□□ -0.57
TUBGCP3-201ENST00000261965 GOLT1AQ6ZVE7 132 aa11.51□□□□□ -0.57
TUBGCP3-201ENST00000261965 IGKV3-7A0A075B6H7 116 aa11.51□□□□□ -0.57
TUBGCP3-201ENST00000261965 PMS2P5A8MQ11 134 aa11.51□□□□□ -0.57
TUBGCP3-201ENST00000261965 PROP1O75360 226 aa11.51□□□□□ -0.57
TUBGCP3-201ENST00000261965 MORN2Q502X0 79 aa11.51□□□□□ -0.57
TUBGCP3-201ENST00000261965 SP5Q6BEB4 398 aaPredicted RBP11.51□□□□□ -0.57
TUBGCP3-201ENST00000261965 LINC00305Q7Z4B0 112 aa11.51□□□□□ -0.57
TUBGCP3-201ENST00000261965 MDS2Q8NDY4 140 aa11.51□□□□□ -0.57
TUBGCP3-201ENST00000261965 DEFB104AQ8WTQ1 72 aa11.51□□□□□ -0.57
TUBGCP3-201ENST00000261965 SRSF12Q8WXF0 261 aaKnown RBP11.51□□□□□ -0.57
TUBGCP3-201ENST00000261965 SARAFQ96BY9 339 aa11.51□□□□□ -0.57
TUBGCP3-201ENST00000261965 MAP1AP78559 2803 aaPredicted RBP11.5□□□□□ -0.57
TUBGCP3-201ENST00000261965 CACNA1AO00555 2505 aa11.5□□□□□ -0.57
TUBGCP3-201ENST00000261965 K7EN84 100 aa11.5□□□□□ -0.57
TUBGCP3-201ENST00000261965 MAP1LC3CQ9BXW4 147 aa11.5□□□□□ -0.57
TUBGCP3-201ENST00000261965 DCAF16Q9NXF7 216 aa11.5□□□□□ -0.57
TUBGCP3-201ENST00000261965 ANKHD1Q8IWZ3 2542 aaKnown RBP11.5□□□□□ -0.57
TUBGCP3-201ENST00000261965 GFRA3O60609 400 aa11.5□□□□□ -0.57
TUBGCP3-201ENST00000261965 RNASEH2CQ8TDP1 164 aaKnown RBP11.5□□□□□ -0.57
TUBGCP3-201ENST00000261965 CHRDL1Q9BU40 450 aa11.5□□□□□ -0.57
TUBGCP3-201ENST00000261965 ADGRG4Q8IZF6 3080 aa11.5□□□□□ -0.57
TUBGCP3-201ENST00000261965 SORL1Q92673 2214 aa11.5□□□□□ -0.57
TUBGCP3-201ENST00000261965 A0A1W2PS18 150 aa11.5□□□□□ -0.57
TUBGCP3-201ENST00000261965 NPIPB11E5RHQ5 1161 aa11.5□□□□□ -0.57
TUBGCP3-201ENST00000261965 ISLRO14498 428 aa11.5□□□□□ -0.57
TUBGCP3-201ENST00000261965 HYPMO75409 117 aa11.5□□□□□ -0.57
TUBGCP3-201ENST00000261965 HIST1H1EP10412 219 aaKnown RBP11.5□□□□□ -0.57
TUBGCP3-201ENST00000261965 FOXL1Q12952 345 aa11.5□□□□□ -0.57
TUBGCP3-201ENST00000261965 AMMECR1LQ6DCA0 310 aa11.5□□□□□ -0.57
TUBGCP3-201ENST00000261965 INO80CQ6PI98 192 aaPredicted RBP11.5□□□□□ -0.57
TUBGCP3-201ENST00000261965 C1orf174Q8IYL3 243 aa11.5□□□□□ -0.57
TUBGCP3-201ENST00000261965 FNDC4Q9H6D8 234 aaPredicted RBP11.5□□□□□ -0.57
TUBGCP3-201ENST00000261965 SLAQ13239 276 aa11.49□□□□□ -0.57
TUBGCP3-201ENST00000261965 SFTA2Q6UW10 78 aa11.49□□□□□ -0.57
TUBGCP3-201ENST00000261965 Q6ZT83 130 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms