RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 IGLV1-44P01699 117 aa11.8□□□□□ -0.52
SFSWAP-201ENST00000261674 REG1AP05451 166 aa11.8□□□□□ -0.52
SFSWAP-201ENST00000261674 BRS3P32247 399 aa11.8□□□□□ -0.52
SFSWAP-201ENST00000261674 RPL19P84098 196 aaKnown RBP11.8□□□□□ -0.52
SFSWAP-201ENST00000261674 PRR20EP86478 221 aa11.8□□□□□ -0.52
SFSWAP-201ENST00000261674 PRR20CP86479 221 aa11.8□□□□□ -0.52
SFSWAP-201ENST00000261674 PRR20DP86480 221 aa11.8□□□□□ -0.52
SFSWAP-201ENST00000261674 PRR20BP86481 221 aa11.8□□□□□ -0.52
SFSWAP-201ENST00000261674 PRR20AP86496 221 aa11.8□□□□□ -0.52
SFSWAP-201ENST00000261674 FAM27E3Q08E93 113 aa11.8□□□□□ -0.52
SFSWAP-201ENST00000261674 HARBI1Q96MB7 349 aa11.8□□□□□ -0.52
SFSWAP-201ENST00000261674 FOXA2Q9Y261 457 aaPredicted RBP11.8□□□□□ -0.52
SFSWAP-201ENST00000261674 FAM215AQ9Y5M1 114 aa11.8□□□□□ -0.52
SFSWAP-201ENST00000261674 CRYBG3Q68DQ2 2970 aa11.8□□□□□ -0.52
SFSWAP-201ENST00000261674 TEX50A0A1B0GTY4 177 aa11.79□□□□□ -0.52
SFSWAP-201ENST00000261674 SAA1P0DJI8 122 aaPredicted RBP11.79□□□□□ -0.52
SFSWAP-201ENST00000261674 CCL3L1P16619 93 aa11.79□□□□□ -0.52
SFSWAP-201ENST00000261674 PRB3Q04118 309 aaPredicted RBP11.79□□□□□ -0.52
SFSWAP-201ENST00000261674 IGFL3Q6UXB1 125 aa11.79□□□□□ -0.52
SFSWAP-201ENST00000261674 C1orf162Q8NEQ5 155 aaPredicted RBP11.79□□□□□ -0.52
SFSWAP-201ENST00000261674 NRN1Q9NPD7 142 aa11.79□□□□□ -0.52
SFSWAP-201ENST00000261674 PRNDQ9UKY0 176 aa11.79□□□□□ -0.52
SFSWAP-201ENST00000261674 MALRD1Q5VYJ5 2156 aa11.79□□□□□ -0.52
SFSWAP-201ENST00000261674 KIR2DL5BA0A0G2JN68 375 aa11.79□□□□□ -0.52
SFSWAP-201ENST00000261674 KIR2DL5BA0A0G2JPC4 375 aa11.79□□□□□ -0.52
SFSWAP-201ENST00000261674 H3BTX0 84 aa11.79□□□□□ -0.52
SFSWAP-201ENST00000261674 CT45A6P0DMU7 189 aa11.79□□□□□ -0.52
SFSWAP-201ENST00000261674 CT45A5P0DMU8 189 aa11.79□□□□□ -0.52
SFSWAP-201ENST00000261674 CT45A7P0DMV0 189 aa11.79□□□□□ -0.52
SFSWAP-201ENST00000261674 KIR2DL5AQ8N109 375 aa11.79□□□□□ -0.52
SFSWAP-201ENST00000261674 BLNKQ8WV28 456 aa11.79□□□□□ -0.52
SFSWAP-201ENST00000261674 ZNF331Q9NQX6 463 aaPredicted RBP11.79□□□□□ -0.52
SFSWAP-201ENST00000261674 AREGP15514 252 aa11.79□□□□□ -0.52
SFSWAP-201ENST00000261674 TAS2R45P59539 299 aa11.79□□□□□ -0.52
SFSWAP-201ENST00000261674 ZNF474Q6S9Z5 364 aaPredicted RBP11.79□□□□□ -0.52
SFSWAP-201ENST00000261674 ZNF503Q96F45 646 aa11.79□□□□□ -0.52
SFSWAP-201ENST00000261674 TXN2Q99757 166 aa11.79□□□□□ -0.52
SFSWAP-201ENST00000261674 GPR6P46095 362 aaPredicted RBP11.78□□□□□ -0.52
SFSWAP-201ENST00000261674 MFAP2P55001 183 aa11.78□□□□□ -0.52
SFSWAP-201ENST00000261674 SELENOTP62341 195 aa11.78□□□□□ -0.52
SFSWAP-201ENST00000261674 SSBP2P81877 361 aaPredicted RBP11.78□□□□□ -0.52
SFSWAP-201ENST00000261674 C22orf34Q6ZV56 151 aa11.78□□□□□ -0.52
SFSWAP-201ENST00000261674 NEUROG1Q92886 237 aa11.78□□□□□ -0.52
SFSWAP-201ENST00000261674 IGHV3-72A0A0B4J1Y9 119 aa11.78□□□□□ -0.52
SFSWAP-201ENST00000261674 UPK2O00526 184 aa11.78□□□□□ -0.52
SFSWAP-201ENST00000261674 CRYABP02511 175 aaKnown RBP11.78□□□□□ -0.52
SFSWAP-201ENST00000261674 RAB4AP20338 218 aa11.78□□□□□ -0.52
SFSWAP-201ENST00000261674 USF1P22415 310 aaPredicted RBP11.78□□□□□ -0.52
SFSWAP-201ENST00000261674 GUSBP1Q15486 140 aa11.78□□□□□ -0.52
SFSWAP-201ENST00000261674 TMEM68Q96MH6 324 aa11.78□□□□□ -0.52
SFSWAP-201ENST00000261674 MIEN1Q9BRT3 115 aa11.78□□□□□ -0.52
SFSWAP-201ENST00000261674 TIMM8BQ9Y5J9 83 aaPredicted RBP11.78□□□□□ -0.52
SFSWAP-201ENST00000261674 SVEP1Q4LDE5 3571 aa11.78□□□□□ -0.52
SFSWAP-201ENST00000261674 C9JCJ5 164 aa11.77□□□□□ -0.52
SFSWAP-201ENST00000261674 E7EUB6 86 aa11.77□□□□□ -0.52
SFSWAP-201ENST00000261674 RPLP1P05386 114 aaKnown RBP11.77□□□□□ -0.52
SFSWAP-201ENST00000261674 GPX1P07203 203 aa11.77□□□□□ -0.52
SFSWAP-201ENST00000261674 C8orf88P0DMB2 117 aa11.77□□□□□ -0.52
SFSWAP-201ENST00000261674 AARDQ4LEZ3 155 aa11.77□□□□□ -0.52
SFSWAP-201ENST00000261674 STUMQ69YW2 141 aa11.77□□□□□ -0.52
SFSWAP-201ENST00000261674 LCN12Q6JVE5 192 aa11.77□□□□□ -0.52
SFSWAP-201ENST00000261674 NPIPB3Q92617 1050 aa11.77□□□□□ -0.52
SFSWAP-201ENST00000261674 SLC35E1Q96K37 410 aa11.77□□□□□ -0.52
SFSWAP-201ENST00000261674 SSBP4Q9BWG4 385 aaPredicted RBP11.77□□□□□ -0.52
SFSWAP-201ENST00000261674 MRPL20Q9BYC9 149 aaKnown RBP11.77□□□□□ -0.52
SFSWAP-201ENST00000261674 PRRG2O14669 202 aa11.77□□□□□ -0.53
SFSWAP-201ENST00000261674 ENSAO43768 121 aaKnown RBP11.77□□□□□ -0.53
SFSWAP-201ENST00000261674 COX7A2P2O60397 106 aa11.77□□□□□ -0.53
SFSWAP-201ENST00000261674 ORM2P19652 201 aa11.77□□□□□ -0.53
SFSWAP-201ENST00000261674 GLRXP35754 106 aa11.77□□□□□ -0.53
SFSWAP-201ENST00000261674 DCHS2Q6V1P9 2916 aa11.77□□□□□ -0.53
SFSWAP-201ENST00000261674 TOX4O94842 621 aa11.77□□□□□ -0.53
SFSWAP-201ENST00000261674 ERHP84090 104 aaKnown RBP11.77□□□□□ -0.53
SFSWAP-201ENST00000261674 PRCDQ00LT1 54 aa11.77□□□□□ -0.53
SFSWAP-201ENST00000261674 MMDQ15546 238 aa11.77□□□□□ -0.53
SFSWAP-201ENST00000261674 CX3CL1P78423 397 aa11.76□□□□□ -0.53
SFSWAP-201ENST00000261674 SPATA45Q537H7 98 aa11.76□□□□□ -0.53
SFSWAP-201ENST00000261674 C11orf52Q96A22 123 aa11.76□□□□□ -0.53
SFSWAP-201ENST00000261674 ADTRPQ96IZ2 230 aa11.76□□□□□ -0.53
SFSWAP-201ENST00000261674 APCSP02743 223 aa11.76□□□□□ -0.53
SFSWAP-201ENST00000261674 NPSP0C0P6 89 aa11.76□□□□□ -0.53
SFSWAP-201ENST00000261674 GNG5P63218 68 aa11.76□□□□□ -0.53
SFSWAP-201ENST00000261674 DIAPH2-AS1Q14236 149 aa11.76□□□□□ -0.53
SFSWAP-201ENST00000261674 SLC25A33Q9BSK2 321 aa11.76□□□□□ -0.53
SFSWAP-201ENST00000261674 TMEM208Q9BTX3 173 aa11.76□□□□□ -0.53
SFSWAP-201ENST00000261674 GNB1LQ9BYB4 327 aa11.76□□□□□ -0.53
SFSWAP-201ENST00000261674 AMMECR1Q9Y4X0 333 aaPredicted RBP11.76□□□□□ -0.53
SFSWAP-201ENST00000261674 CHD6Q8TD26 2715 aa11.76□□□□□ -0.53
SFSWAP-201ENST00000261674 IGHV1-46P01743 117 aa11.75□□□□□ -0.53
SFSWAP-201ENST00000261674 CGB3P0DN86 165 aa11.75□□□□□ -0.53
SFSWAP-201ENST00000261674 CGB7P0DN87 165 aa11.75□□□□□ -0.53
SFSWAP-201ENST00000261674 HCP5Q6MZN7 132 aa11.75□□□□□ -0.53
SFSWAP-201ENST00000261674 TMEM136Q6ZRR5 245 aa11.75□□□□□ -0.53
SFSWAP-201ENST00000261674 OR10X1Q8NGY0 326 aa11.75□□□□□ -0.53
SFSWAP-201ENST00000261674 CCL17Q92583 94 aa11.75□□□□□ -0.53
SFSWAP-201ENST00000261674 BORCS7Q96B45 105 aa11.75□□□□□ -0.53
SFSWAP-201ENST00000261674 DNAJC4Q9NNZ3 241 aa11.75□□□□□ -0.53
SFSWAP-201ENST00000261674 RAB9BQ9NP90 201 aa11.75□□□□□ -0.53
SFSWAP-201ENST00000261674 A0A1W2PS18 150 aa11.75□□□□□ -0.53
SFSWAP-201ENST00000261674 FAM90A27PA6NNH2 459 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms