RNA–Protein interactions for RNA: ENST00000261517.9

VPS13C-202, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 13,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-202ENST00000261517 TUSC1Q2TAM9 212 aa3.61□□□□□ -1.83
VPS13C-202ENST00000261517 TMEM249Q2WGJ8 235 aa3.61□□□□□ -1.83
VPS13C-202ENST00000261517 BATF2Q8N1L9 274 aa3.61□□□□□ -1.83
VPS13C-202ENST00000261517 RAB37Q96AX2 223 aa3.61□□□□□ -1.83
VPS13C-202ENST00000261517 CA2P00918 260 aa3.61□□□□□ -1.83
VPS13C-202ENST00000261517 NCMAPQ5T1S8 102 aa3.61□□□□□ -1.83
VPS13C-202ENST00000261517 NR2C2APQ86WQ0 139 aa3.61□□□□□ -1.83
VPS13C-202ENST00000261517 OR10W1Q8NGF6 305 aa3.61□□□□□ -1.83
VPS13C-202ENST00000261517 RNF166Q96A37 237 aaPredicted RBP3.61□□□□□ -1.83
VPS13C-202ENST00000261517 LINC00477Q96M19 166 aa3.61□□□□□ -1.83
VPS13C-202ENST00000261517 DMRT1Q9Y5R6 373 aa3.61□□□□□ -1.83
VPS13C-202ENST00000261517 LRRK2Q5S007 2527 aa3.6□□□□□ -1.83
VPS13C-202ENST00000261517 IGF2RP11717 2491 aa3.6□□□□□ -1.83
VPS13C-202ENST00000261517 K7EMI3 77 aa3.6□□□□□ -1.83
VPS13C-202ENST00000261517 IL4P05112 153 aa3.6□□□□□ -1.83
VPS13C-202ENST00000261517 CD69Q07108 199 aa3.6□□□□□ -1.83
VPS13C-202ENST00000261517 CBLN2Q8IUK8 224 aa3.6□□□□□ -1.83
VPS13C-202ENST00000261517 OR4D5Q8NGN0 318 aa3.6□□□□□ -1.83
VPS13C-202ENST00000261517 OR1N2Q8NGR9 330 aa3.6□□□□□ -1.83
VPS13C-202ENST00000261517 TMEM167AQ8TBQ9 72 aa3.6□□□□□ -1.83
VPS13C-202ENST00000261517 NABP1Q96AH0 204 aa3.6□□□□□ -1.83
VPS13C-202ENST00000261517 PTPN13Q12923 2485 aa3.6□□□□□ -1.83
VPS13C-202ENST00000261517 A0A087X0M5 115 aa3.6□□□□□ -1.83
VPS13C-202ENST00000261517 A0A1B0GX30 115 aa3.6□□□□□ -1.83
VPS13C-202ENST00000261517 FAM157AC9JC47 383 aa3.6□□□□□ -1.83
VPS13C-202ENST00000261517 TIAF1O95411 115 aa3.6□□□□□ -1.83
VPS13C-202ENST00000261517 TBX6O95947 436 aaPredicted RBP3.6□□□□□ -1.83
VPS13C-202ENST00000261517 FCGR2BP31994 310 aaPredicted RBP3.6□□□□□ -1.83
VPS13C-202ENST00000261517 DUTP33316 252 aaKnown RBP3.6□□□□□ -1.83
VPS13C-202ENST00000261517 CRYBA2P53672 197 aa3.6□□□□□ -1.83
VPS13C-202ENST00000261517 PLAC9Q5JTB6 97 aa3.6□□□□□ -1.83
VPS13C-202ENST00000261517 C9orf139Q6ZV77 190 aa3.6□□□□□ -1.83
VPS13C-202ENST00000261517 IL17RELQ6ZVW7 336 aa3.6□□□□□ -1.83
VPS13C-202ENST00000261517 TMEM178BH3BS89 294 aa3.6□□□□□ -1.83
VPS13C-202ENST00000261517 CEACAM4O75871 244 aa3.6□□□□□ -1.83
VPS13C-202ENST00000261517 VPS25Q9BRG1 176 aa3.6□□□□□ -1.83
VPS13C-202ENST00000261517 PARLQ9H300 379 aa3.6□□□□□ -1.83
VPS13C-202ENST00000261517 ALPK3Q96L96 1907 aa3.6□□□□□ -1.83
VPS13C-202ENST00000261517 MESP2Q0VG99 397 aa3.6□□□□□ -1.83
VPS13C-202ENST00000261517 FBXL7Q9UJT9 491 aa3.6□□□□□ -1.83
VPS13C-202ENST00000261517 ANAPC10Q9UM13 185 aa3.6□□□□□ -1.83
VPS13C-202ENST00000261517 FOXL1Q12952 345 aa3.6□□□□□ -1.83
VPS13C-202ENST00000261517 MIC13Q5XKP0 118 aa3.6□□□□□ -1.83
VPS13C-202ENST00000261517 ZNF256Q9Y2P7 627 aaPredicted RBP3.6□□□□□ -1.83
VPS13C-202ENST00000261517 TEX48A0A1B0GUV7 120 aa3.6□□□□□ -1.83
VPS13C-202ENST00000261517 CELA2AP08217 269 aa3.6□□□□□ -1.83
VPS13C-202ENST00000261517 RCC1P18754 421 aaPredicted RBP3.6□□□□□ -1.83
VPS13C-202ENST00000261517 RPL24P83731 157 aaKnown RBP3.6□□□□□ -1.83
VPS13C-202ENST00000261517 C9orf106Q8NAJ2 232 aa3.6□□□□□ -1.83
VPS13C-202ENST00000261517 AMELYQ99218 206 aa3.6□□□□□ -1.83
VPS13C-202ENST00000261517 METRNQ9UJH8 293 aa3.6□□□□□ -1.83
VPS13C-202ENST00000261517 K7ENP7 123 aa3.6□□□□□ -1.83
VPS13C-202ENST00000261517 ATXN7O15265 892 aaPredicted RBP3.6□□□□□ -1.83
VPS13C-202ENST00000261517 MRPL54Q6P161 138 aaKnown RBP3.6□□□□□ -1.83
VPS13C-202ENST00000261517 RGP1Q92546 391 aaPredicted RBP3.6□□□□□ -1.83
VPS13C-202ENST00000261517 MRPL18Q9H0U6 180 aaKnown RBP3.6□□□□□ -1.83
VPS13C-202ENST00000261517 MS4A6AQ9H2W1 248 aa3.6□□□□□ -1.83
VPS13C-202ENST00000261517 TNFSF13O75888 250 aa3.6□□□□□ -1.83
VPS13C-202ENST00000261517 PLA2G2CQ5R387 149 aa3.6□□□□□ -1.83
VPS13C-202ENST00000261517 RNF152Q8N8N0 203 aa3.6□□□□□ -1.83
VPS13C-202ENST00000261517 LINC01356Q8N9X3 169 aa3.6□□□□□ -1.83
VPS13C-202ENST00000261517 SLC25A39Q9BZJ4 359 aaPredicted RBP3.6□□□□□ -1.83
VPS13C-202ENST00000261517 AICDAQ9GZX7 198 aa3.6□□□□□ -1.83
VPS13C-202ENST00000261517 BEX4Q9NWD9 120 aaPredicted RBP3.6□□□□□ -1.83
VPS13C-202ENST00000261517 ZNF525Q8N782 197 aa3.6□□□□□ -1.83
VPS13C-202ENST00000261517 KLF2Q9Y5W3 355 aaPredicted RBP3.6□□□□□ -1.83
VPS13C-202ENST00000261517 PRUNE2Q8WUY3 3088 aa3.6□□□□□ -1.83
VPS13C-202ENST00000261517 SCO1O75880 301 aa3.6□□□□□ -1.83
VPS13C-202ENST00000261517 RFPL3SP0C7P2 107 aa3.6□□□□□ -1.83
VPS13C-202ENST00000261517 SUPT4H1P63272 117 aaKnown RBP3.6□□□□□ -1.83
VPS13C-202ENST00000261517 GUCD1Q96NT3 240 aa3.6□□□□□ -1.83
VPS13C-202ENST00000261517 A0A1B0GUS0 222 aa3.59□□□□□ -1.83
VPS13C-202ENST00000261517 COLCA1Q6ZS62 124 aa3.59□□□□□ -1.83
VPS13C-202ENST00000261517 GTSCR1Q86UQ5 136 aa3.59□□□□□ -1.83
VPS13C-202ENST00000261517 TNFRSF18Q9Y5U5 241 aa3.59□□□□□ -1.83
VPS13C-202ENST00000261517 RFNGQ9Y644 331 aa3.59□□□□□ -1.83
VPS13C-202ENST00000261517 ARHGAP21Q5T5U3 1957 aa3.59□□□□□ -1.83
VPS13C-202ENST00000261517 CCL3L1P16619 93 aa3.59□□□□□ -1.83
VPS13C-202ENST00000261517 H2BFSP57053 126 aa3.59□□□□□ -1.83
VPS13C-202ENST00000261517 RNF125Q96EQ8 232 aa3.59□□□□□ -1.83
VPS13C-202ENST00000261517 HDHD3Q9BSH5 251 aaPredicted RBP3.59□□□□□ -1.83
VPS13C-202ENST00000261517 KAAG1Q9UBP8 84 aa3.59□□□□□ -1.83
VPS13C-202ENST00000261517 WDR83OSQ9Y284 106 aa3.59□□□□□ -1.83
VPS13C-202ENST00000261517 HILPDAQ9Y5L2 63 aa3.59□□□□□ -1.83
VPS13C-202ENST00000261517 ZFYVE26Q68DK2 2539 aa3.59□□□□□ -1.83
VPS13C-202ENST00000261517 FGF16O43320 207 aa3.59□□□□□ -1.83
VPS13C-202ENST00000261517 MGPP08493 103 aa3.59□□□□□ -1.83
VPS13C-202ENST00000261517 CENPWQ5EE01 88 aa3.59□□□□□ -1.83
VPS13C-202ENST00000261517 NMSQ5H8A3 153 aa3.59□□□□□ -1.83
VPS13C-202ENST00000261517 FSTL3O95633 263 aa3.59□□□□□ -1.83
VPS13C-202ENST00000261517 IGHV2-70P01814 119 aa3.59□□□□□ -1.83
VPS13C-202ENST00000261517 RARRES2Q99969 163 aa3.59□□□□□ -1.83
VPS13C-202ENST00000261517 NRN1Q9NPD7 142 aa3.59□□□□□ -1.83
VPS13C-202ENST00000261517 IGHV1-18A0A0C4DH31 117 aa3.59□□□□□ -1.83
VPS13C-202ENST00000261517 LAIR2Q6ISS4 152 aa3.59□□□□□ -1.83
VPS13C-202ENST00000261517 MS4A3Q96HJ5 214 aa3.59□□□□□ -1.83
VPS13C-202ENST00000261517 ZNF414Q96IQ9 312 aa3.59□□□□□ -1.83
VPS13C-202ENST00000261517 TGFBR3LH3BV60 316 aa3.59□□□□□ -1.83
VPS13C-202ENST00000261517 SRSF12Q8WXF0 261 aaKnown RBP3.59□□□□□ -1.83
VPS13C-202ENST00000261517 TP53RKQ96S44 253 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms