RNA–Protein interactions for RNA: ENST00000261007.9

CHRNA1-201, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNA1, Length 1,980 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-201ENST00000261007 VAMP3Q15836 100 aa8.81□□□□□ -1
CHRNA1-201ENST00000261007 MAJINQ3KP22 176 aa8.81□□□□□ -1
CHRNA1-201ENST00000261007 FAM53AQ6NSI3 398 aaPredicted RBP8.81□□□□□ -1
CHRNA1-201ENST00000261007 EBLN2Q6P2I7 272 aa8.81□□□□□ -1
CHRNA1-201ENST00000261007 CHRDL1Q9BU40 450 aa8.81□□□□□ -1
CHRNA1-201ENST00000261007 NGBQ9NPG2 151 aa8.81□□□□□ -1
CHRNA1-201ENST00000261007 CALYQ9NYX4 217 aa8.81□□□□□ -1
CHRNA1-201ENST00000261007 JKAMPQ9P055 326 aa8.81□□□□□ -1
CHRNA1-201ENST00000261007 Q9UFV3 132 aa8.81□□□□□ -1
CHRNA1-201ENST00000261007 TCF19Q9Y242 345 aa8.81□□□□□ -1
CHRNA1-201ENST00000261007 DMDP11532 3685 aa8.81□□□□□ -1
CHRNA1-201ENST00000261007 URB1O60287 2271 aaKnown RBP8.81□□□□□ -1
CHRNA1-201ENST00000261007 CRXO43186 299 aaPredicted RBP8.81□□□□□ -1
CHRNA1-201ENST00000261007 FCGR3BO75015 233 aa8.81□□□□□ -1
CHRNA1-201ENST00000261007 TCL1AP56279 114 aa8.81□□□□□ -1
CHRNA1-201ENST00000261007 TAS2R45P59539 299 aa8.81□□□□□ -1
CHRNA1-201ENST00000261007 FOXC1Q12948 553 aa8.81□□□□□ -1
CHRNA1-201ENST00000261007 FXYD3Q14802 87 aa8.81□□□□□ -1
CHRNA1-201ENST00000261007 LCN12Q6JVE5 192 aa8.81□□□□□ -1
CHRNA1-201ENST00000261007 Q6ZVH6 145 aa8.81□□□□□ -1
CHRNA1-201ENST00000261007 MIR17HGQ75NE6 70 aa8.81□□□□□ -1
CHRNA1-201ENST00000261007 ATOH7Q8N100 152 aa8.81□□□□□ -1
CHRNA1-201ENST00000261007 TPRX1Q8N7U7 411 aa8.81□□□□□ -1
CHRNA1-201ENST00000261007 NEUROG1Q92886 237 aa8.81□□□□□ -1
CHRNA1-201ENST00000261007 MBD6Q96DN6 1003 aa8.81□□□□□ -1
CHRNA1-201ENST00000261007 ADTRPQ96IZ2 230 aa8.81□□□□□ -1
CHRNA1-201ENST00000261007 GCM1Q9NP62 436 aa8.81□□□□□ -1
CHRNA1-201ENST00000261007 TOX4O94842 621 aa8.8□□□□□ -1
CHRNA1-201ENST00000261007 CGB3P0DN86 165 aa8.8□□□□□ -1
CHRNA1-201ENST00000261007 CGB7P0DN87 165 aa8.8□□□□□ -1
CHRNA1-201ENST00000261007 SLC35B1P78383 322 aa8.8□□□□□ -1
CHRNA1-201ENST00000261007 SLAQ13239 276 aa8.8□□□□□ -1
CHRNA1-201ENST00000261007 RNF151Q2KHN1 245 aa8.8□□□□□ -1
CHRNA1-201ENST00000261007 TEX36Q5VZQ5 186 aa8.8□□□□□ -1
CHRNA1-201ENST00000261007 RFESDQ8TAC1 157 aa8.8□□□□□ -1
CHRNA1-201ENST00000261007 GRAMD2BQ96HH9 432 aa8.8□□□□□ -1
CHRNA1-201ENST00000261007 TNFRSF19Q9NS68 423 aa8.8□□□□□ -1
CHRNA1-201ENST00000261007 WDFY4Q6ZS81 3184 aa8.8□□□□□ -1
CHRNA1-201ENST00000261007 CNOT1A5YKK6 2376 aaKnown RBP8.8□□□□□ -1
CHRNA1-201ENST00000261007 IGHV3OR15-7A0A075B7D8 119 aa8.79□□□□□ -1
CHRNA1-201ENST00000261007 IGHV3-43A0A0B4J1X8 118 aa8.79□□□□□ -1
CHRNA1-201ENST00000261007 KBTBD11-OT1A0A1B0GTJ5 212 aa8.79□□□□□ -1
CHRNA1-201ENST00000261007 PROP1O75360 226 aa8.79□□□□□ -1
CHRNA1-201ENST00000261007 IGHV3-43DP0DP04 118 aa8.79□□□□□ -1
CHRNA1-201ENST00000261007 UCNP55089 124 aa8.79□□□□□ -1
CHRNA1-201ENST00000261007 LOXL3P58215 753 aa8.79□□□□□ -1
CHRNA1-201ENST00000261007 LINC00205P59089 165 aa8.79□□□□□ -1
CHRNA1-201ENST00000261007 Q56UQ5 140 aa8.79□□□□□ -1
CHRNA1-201ENST00000261007 Q8NA96 180 aa8.79□□□□□ -1
CHRNA1-201ENST00000261007 FAM122AQ96E09 287 aa8.79□□□□□ -1
CHRNA1-201ENST00000261007 NABP2Q9BQ15 211 aa8.79□□□□□ -1
CHRNA1-201ENST00000261007 TMEM70Q9BUB7 260 aa8.79□□□□□ -1
CHRNA1-201ENST00000261007 CST9LQ9H4G1 147 aa8.79□□□□□ -1
CHRNA1-201ENST00000261007 LINC00574Q9H8X3 128 aa8.79□□□□□ -1
CHRNA1-201ENST00000261007 SERTAD4Q9NUC0 356 aa8.79□□□□□ -1
CHRNA1-201ENST00000261007 TMEM140Q9NV12 185 aa8.79□□□□□ -1
CHRNA1-201ENST00000261007 FOXA2Q9Y261 457 aaPredicted RBP8.79□□□□□ -1
CHRNA1-201ENST00000261007 C15orf61A6NNL5 157 aa8.79□□□□□ -1
CHRNA1-201ENST00000261007 TAX1BP3O14907 124 aa8.79□□□□□ -1
CHRNA1-201ENST00000261007 TFF1P04155 84 aa8.79□□□□□ -1
CHRNA1-201ENST00000261007 MGST1P10620 155 aaKnown RBP8.79□□□□□ -1
CHRNA1-201ENST00000261007 IGFBP2P18065 325 aa8.79□□□□□ -1
CHRNA1-201ENST00000261007 ATP5IP56385 69 aaPredicted RBP8.79□□□□□ -1
CHRNA1-201ENST00000261007 HSPE1P61604 102 aaKnown RBP8.79□□□□□ -1
CHRNA1-201ENST00000261007 OCIAD2Q56VL3 154 aa8.79□□□□□ -1
CHRNA1-201ENST00000261007 ETFRF1Q6IPR1 90 aa8.79□□□□□ -1
CHRNA1-201ENST00000261007 C12orf54Q6X4T0 127 aa8.79□□□□□ -1
CHRNA1-201ENST00000261007 ZNF788Q6ZQV5 615 aa8.79□□□□□ -1
CHRNA1-201ENST00000261007 ATP5L2Q7Z4Y8 100 aa8.79□□□□□ -1
CHRNA1-201ENST00000261007 DEFB125Q8N687 156 aa8.79□□□□□ -1
CHRNA1-201ENST00000261007 ZNRF1Q8ND25 227 aa8.79□□□□□ -1
CHRNA1-201ENST00000261007 ZNF596Q8TC21 504 aa8.79□□□□□ -1
CHRNA1-201ENST00000261007 ZNF503Q96F45 646 aa8.79□□□□□ -1
CHRNA1-201ENST00000261007 S1PR3Q99500 378 aa8.79□□□□□ -1
CHRNA1-201ENST00000261007 PLEKHA3Q9HB20 300 aa8.79□□□□□ -1
CHRNA1-201ENST00000261007 GGTLC3B5MD39 225 aa8.78□□□□□ -1
CHRNA1-201ENST00000261007 M0R1X1 148 aa8.78□□□□□ -1
CHRNA1-201ENST00000261007 PET117Q6UWS5 81 aa8.78□□□□□ -1
CHRNA1-201ENST00000261007 WFDC8Q8IUA0 241 aa8.78□□□□□ -1
CHRNA1-201ENST00000261007 NUDT10Q8NFP7 164 aa8.78□□□□□ -1
CHRNA1-201ENST00000261007 OR4S2Q8NH73 311 aa8.78□□□□□ -1
CHRNA1-201ENST00000261007 RND1Q92730 232 aa8.78□□□□□ -1
CHRNA1-201ENST00000261007 VPS25Q9BRG1 176 aa8.78□□□□□ -1
CHRNA1-201ENST00000261007 DCTN5Q9BTE1 182 aa8.78□□□□□ -1
CHRNA1-201ENST00000261007 SCNM1Q9BWG6 230 aa8.78□□□□□ -1
CHRNA1-201ENST00000261007 IFI27L2Q9H2X8 130 aa8.78□□□□□ -1
CHRNA1-201ENST00000261007 ENY2Q9NPA8 101 aa8.78□□□□□ -1
CHRNA1-201ENST00000261007 MSRB2Q9Y3D2 182 aa8.78□□□□□ -1
CHRNA1-201ENST00000261007 TRAV3A0A0B4J244 114 aa8.77□□□□□ -1
CHRNA1-201ENST00000261007 hADV38S2A0JD32 116 aa8.77□□□□□ -1
CHRNA1-201ENST00000261007 C17orf100A8MU93 164 aa8.77□□□□□ -1
CHRNA1-201ENST00000261007 DEFB108AA8MXU0 73 aa8.77□□□□□ -1
CHRNA1-201ENST00000261007 HOXA4Q00056 320 aaPredicted RBP8.77□□□□□ -1
CHRNA1-201ENST00000261007 BVES-AS1Q5T3Y7 98 aa8.77□□□□□ -1
CHRNA1-201ENST00000261007 GAFA1Q96PS6 74 aa8.77□□□□□ -1
CHRNA1-201ENST00000261007 MRPL32Q9BYC8 188 aaKnown RBP8.77□□□□□ -1
CHRNA1-201ENST00000261007 TMEM14BQ9NUH8 114 aa8.77□□□□□ -1
CHRNA1-201ENST00000261007 IDI2-AS1Q9NZ38 188 aa8.77□□□□□ -1
CHRNA1-201ENST00000261007 FREM2Q5SZK8 3169 aa8.77□□□□□ -1.01
CHRNA1-201ENST00000261007 OR4C46A6NHA9 309 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms