RNA–Protein interactions for RNA: ENST00000260956.8

SSB-201, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-201ENST00000260956 C11orf52Q96A22 123 aa14.14□□□□□ -0.15
SSB-201ENST00000260956 OR8B2Q96RD0 313 aa14.14□□□□□ -0.15
SSB-201ENST00000260956 RAB1BQ9H0U4 201 aa14.14□□□□□ -0.15
SSB-201ENST00000260956 METTL1Q9UBP6 276 aaKnown RBP14.14□□□□□ -0.15
SSB-201ENST00000260956 F6UZH7 168 aa14.13□□□□□ -0.15
SSB-201ENST00000260956 PFN1P07737 140 aaKnown RBP14.13□□□□□ -0.15
SSB-201ENST00000260956 OR10J1P30954 320 aa14.13□□□□□ -0.15
SSB-201ENST00000260956 EFNA4P52798 201 aa14.13□□□□□ -0.15
SSB-201ENST00000260956 SNRPEP62304 92 aaKnown RBP14.13□□□□□ -0.15
SSB-201ENST00000260956 PRB3Q04118 309 aaPredicted RBP14.13□□□□□ -0.15
SSB-201ENST00000260956 PRSS8Q16651 343 aa14.13□□□□□ -0.15
SSB-201ENST00000260956 IQCF2Q8IXL9 164 aa14.13□□□□□ -0.15
SSB-201ENST00000260956 ZNF114Q8NC26 417 aa14.13□□□□□ -0.15
SSB-201ENST00000260956 RNASEH2CQ8TDP1 164 aaKnown RBP14.13□□□□□ -0.15
SSB-201ENST00000260956 Q96MF0 132 aa14.13□□□□□ -0.15
SSB-201ENST00000260956 ARL2-SNX15V9GYD0 113 aa14.13□□□□□ -0.15
SSB-201ENST00000260956 TLN2Q9Y4G6 2542 aa14.13□□□□□ -0.15
SSB-201ENST00000260956 CSPG4Q6UVK1 2322 aa14.13□□□□□ -0.15
SSB-201ENST00000260956 TRBV20OR9-2A0A075B6H5 130 aa14.12□□□□□ -0.15
SSB-201ENST00000260956 IGKV1D-37A0A075B6S9 117 aa14.12□□□□□ -0.15
SSB-201ENST00000260956 IGHV3-72A0A0B4J1Y9 119 aa14.12□□□□□ -0.15
SSB-201ENST00000260956 PLXNB1O43157 2135 aa14.12□□□□□ -0.15
SSB-201ENST00000260956 CRYGCP07315 174 aa14.12□□□□□ -0.15
SSB-201ENST00000260956 CNTFRP26992 372 aa14.12□□□□□ -0.15
SSB-201ENST00000260956 PRRX1P54821 245 aa14.12□□□□□ -0.15
SSB-201ENST00000260956 UBE2G2P60604 165 aa14.12□□□□□ -0.15
SSB-201ENST00000260956 PAX2Q02962 417 aa14.12□□□□□ -0.15
SSB-201ENST00000260956 ADIRFQ15847 76 aa14.12□□□□□ -0.15
SSB-201ENST00000260956 ZNF674Q2M3X9 581 aa14.12□□□□□ -0.15
SSB-201ENST00000260956 HCP5Q6MZN7 132 aa14.12□□□□□ -0.15
SSB-201ENST00000260956 PRSS57Q6UWY2 283 aa14.12□□□□□ -0.15
SSB-201ENST00000260956 MIR17HGQ75NE6 70 aa14.12□□□□□ -0.15
SSB-201ENST00000260956 C16orf82Q7Z2V1 217 aa14.12□□□□□ -0.15
SSB-201ENST00000260956 THAP8Q8NA92 274 aa14.12□□□□□ -0.15
SSB-201ENST00000260956 NEU4Q8WWR8 484 aaPredicted RBP14.12□□□□□ -0.15
SSB-201ENST00000260956 DERL1Q9BUN8 251 aa14.12□□□□□ -0.15
SSB-201ENST00000260956 FUT9Q9Y231 359 aa14.12□□□□□ -0.15
SSB-201ENST00000260956 URGCP-MRPS24S4R325 110 aa14.12□□□□□ -0.15
SSB-201ENST00000260956 FOXH1O75593 365 aa14.12□□□□□ -0.15
SSB-201ENST00000260956 ERHP84090 104 aaKnown RBP14.12□□□□□ -0.15
SSB-201ENST00000260956 PSG5Q15238 335 aa14.12□□□□□ -0.15
SSB-201ENST00000260956 CLEC12BQ2HXU8 276 aa14.12□□□□□ -0.15
SSB-201ENST00000260956 MRPL36Q9P0J6 103 aaKnown RBP14.12□□□□□ -0.15
SSB-201ENST00000260956 IGHV4-30-2A0A087WSY4 118 aa14.11□□□□□ -0.15
SSB-201ENST00000260956 MFAP2P55001 183 aa14.11□□□□□ -0.15
SSB-201ENST00000260956 LINC01551Q86U37 167 aa14.11□□□□□ -0.15
SSB-201ENST00000260956 PRELID1Q9Y255 219 aa14.11□□□□□ -0.15
SSB-201ENST00000260956 SIGLEC9Q9Y336 463 aa14.11□□□□□ -0.15
SSB-201ENST00000260956 MED13LQ71F56 2210 aa14.11□□□□□ -0.15
SSB-201ENST00000260956 LIPFP07098 398 aa14.1□□□□□ -0.15
SSB-201ENST00000260956 OR11H6Q8NGC7 330 aa14.1□□□□□ -0.15
SSB-201ENST00000260956 OR2T6Q8NHC8 308 aa14.1□□□□□ -0.15
SSB-201ENST00000260956 ODF3BA8MYP8 253 aa14.1□□□□□ -0.15
SSB-201ENST00000260956 CLN5O75503 358 aa14.1□□□□□ -0.15
SSB-201ENST00000260956 AREGP15514 252 aa14.1□□□□□ -0.15
SSB-201ENST00000260956 GATA2P23769 480 aaPredicted RBP14.1□□□□□ -0.15
SSB-201ENST00000260956 COX7A1P24310 79 aa14.1□□□□□ -0.15
SSB-201ENST00000260956 RPS10P46783 165 aaKnown RBP14.1□□□□□ -0.15
SSB-201ENST00000260956 COMPP49747 757 aaPredicted RBP14.1□□□□□ -0.15
SSB-201ENST00000260956 MMD2Q8IY49 270 aa14.1□□□□□ -0.15
SSB-201ENST00000260956 TMEM37Q8WXS4 190 aa14.1□□□□□ -0.15
SSB-201ENST00000260956 FAM210BQ96KR6 192 aa14.1□□□□□ -0.15
SSB-201ENST00000260956 FAM167A-AS1Q96KT0 104 aa14.1□□□□□ -0.15
SSB-201ENST00000260956 C19orf24Q9BVV8 132 aa14.1□□□□□ -0.15
SSB-201ENST00000260956 AMMECR1Q9Y4X0 333 aaPredicted RBP14.1□□□□□ -0.15
SSB-201ENST00000260956 SCO2A0A1W2PP80 73 aa14.09□□□□□ -0.15
SSB-201ENST00000260956 TEX22C9J3V5 150 aa14.09□□□□□ -0.15
SSB-201ENST00000260956 NDUFB4O95168 129 aa14.09□□□□□ -0.15
SSB-201ENST00000260956 FAM78BQ5VT40 261 aa14.09□□□□□ -0.15
SSB-201ENST00000260956 CST9LP1Q5W188 147 aa14.09□□□□□ -0.15
SSB-201ENST00000260956 MAPK1IP1LQ8NDC0 245 aa14.09□□□□□ -0.15
SSB-201ENST00000260956 CFHR4Q92496 578 aa14.09□□□□□ -0.15
SSB-201ENST00000260956 NIPBLQ6KC79 2804 aaeCLIP14.08□□□□□ -0.166e-20■□□□□ 8.2
SSB-201ENST00000260956 M0R1W7 72 aa14.08□□□□□ -0.16
SSB-201ENST00000260956 RPL35P42766 123 aaKnown RBP14.08□□□□□ -0.16
SSB-201ENST00000260956 KIAA0141Q14154 515 aaPredicted RBP14.08□□□□□ -0.16
SSB-201ENST00000260956 TPTE2P1Q5T6R2 138 aa14.08□□□□□ -0.16
SSB-201ENST00000260956 RUSC1-AS1Q66K80 236 aa14.08□□□□□ -0.16
SSB-201ENST00000260956 NANPQ8TBE9 248 aa14.08□□□□□ -0.16
SSB-201ENST00000260956 TMUB1Q9BVT8 246 aa14.08□□□□□ -0.16
SSB-201ENST00000260956 ELOVL1Q9BW60 279 aa14.08□□□□□ -0.16
SSB-201ENST00000260956 CHODLQ9H9P2 273 aa14.08□□□□□ -0.16
SSB-201ENST00000260956 A0A096LNT2 108 aa14.07□□□□□ -0.16
SSB-201ENST00000260956 AP4M1O00189 453 aa14.07□□□□□ -0.16
SSB-201ENST00000260956 CD99P14209 185 aa14.07□□□□□ -0.16
SSB-201ENST00000260956 MORN5Q5VZ52 161 aa14.07□□□□□ -0.16
SSB-201ENST00000260956 C10orf105Q8TEF2 133 aa14.07□□□□□ -0.16
SSB-201ENST00000260956 TIMD4Q96H15 378 aa14.07□□□□□ -0.16
SSB-201ENST00000260956 RNF5Q99942 180 aa14.07□□□□□ -0.16
SSB-201ENST00000260956 DMRT1Q9Y5R6 373 aa14.07□□□□□ -0.16
SSB-201ENST00000260956 INSIG2Q9Y5U4 225 aa14.07□□□□□ -0.16
SSB-201ENST00000260956 ZFHX3Q15911 3703 aa14.07□□□□□ -0.16
SSB-201ENST00000260956 ARHGAP32A7KAX9 2087 aa14.07□□□□□ -0.16
SSB-201ENST00000260956 ENSAO43768 121 aaKnown RBP14.07□□□□□ -0.16
SSB-201ENST00000260956 RPL27AP46776 148 aaKnown RBP14.07□□□□□ -0.16
SSB-201ENST00000260956 ANAPC16Q96DE5 110 aa14.07□□□□□ -0.16
SSB-201ENST00000260956 SMR3AQ99954 134 aa14.07□□□□□ -0.16
SSB-201ENST00000260956 SLC25A33Q9BSK2 321 aa14.07□□□□□ -0.16
SSB-201ENST00000260956 MRPL32Q9BYC8 188 aaKnown RBP14.07□□□□□ -0.16
SSB-201ENST00000260956 TECRQ9NZ01 308 aaKnown RBP14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms