RNA–Protein interactions for RNA: ENST00000258888.5

ALPK3-201, Transcript of alpha kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALPK3, Length 10,917 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3-201ENST00000258888 RNF126Q9BV68 326 aa11.28□□□□□ -0.6
ALPK3-201ENST00000258888 FMC1Q96HJ9 113 aa11.28□□□□□ -0.6
ALPK3-201ENST00000258888 LYZL4Q96KX0 146 aa11.28□□□□□ -0.6
ALPK3-201ENST00000258888 Q9H3A6 140 aa11.28□□□□□ -0.6
ALPK3-201ENST00000258888 PEF1Q9UBV8 284 aaKnown RBP11.28□□□□□ -0.6
ALPK3-201ENST00000258888 LOC105371267A0A1B0GV96 52 aa11.28□□□□□ -0.6
ALPK3-201ENST00000258888 TM4SF5O14894 197 aa11.28□□□□□ -0.6
ALPK3-201ENST00000258888 SLC25A28Q96A46 364 aa11.28□□□□□ -0.6
ALPK3-201ENST00000258888 UMODP07911 640 aa11.28□□□□□ -0.6
ALPK3-201ENST00000258888 SSBP4Q9BWG4 385 aaPredicted RBP11.28□□□□□ -0.6
ALPK3-201ENST00000258888 ASIPP42127 132 aa11.27□□□□□ -0.6
ALPK3-201ENST00000258888 NRN1LQ496H8 165 aa11.27□□□□□ -0.6
ALPK3-201ENST00000258888 LHFPL4Q7Z7J7 247 aa11.27□□□□□ -0.6
ALPK3-201ENST00000258888 BEND2Q8NDZ0 799 aa11.27□□□□□ -0.6
ALPK3-201ENST00000258888 DPM3Q9P2X0 92 aa11.27□□□□□ -0.6
ALPK3-201ENST00000258888 TRPM7Q96QT4 1865 aa11.27□□□□□ -0.6
ALPK3-201ENST00000258888 HIGD1CA8MV81 97 aa11.27□□□□□ -0.6
ALPK3-201ENST00000258888 LYPD3O95274 346 aa11.27□□□□□ -0.6
ALPK3-201ENST00000258888 APOBEC3AP31941 199 aaPredicted RBP11.27□□□□□ -0.6
ALPK3-201ENST00000258888 SAA1P0DJI8 122 aaPredicted RBP11.27□□□□□ -0.6
ALPK3-201ENST00000258888 NPFFO15130 113 aa11.27□□□□□ -0.61
ALPK3-201ENST00000258888 SERF1AO75920 110 aa11.27□□□□□ -0.61
ALPK3-201ENST00000258888 PLAURQ03405 335 aa11.27□□□□□ -0.61
ALPK3-201ENST00000258888 IMMP1LQ96LU5 166 aa11.27□□□□□ -0.61
ALPK3-201ENST00000258888 RNASE7Q9H1E1 156 aaKnown RBP11.27□□□□□ -0.61
ALPK3-201ENST00000258888 SDF2L1Q9HCN8 221 aa11.27□□□□□ -0.61
ALPK3-201ENST00000258888 TSC2P49815 1807 aa11.27□□□□□ -0.61
ALPK3-201ENST00000258888 CD55P08174 381 aa11.27□□□□□ -0.61
ALPK3-201ENST00000258888 HELZP42694 1942 aaKnown RBP11.27□□□□□ -0.61
ALPK3-201ENST00000258888 MYO18BQ8IUG5 2567 aa11.27□□□□□ -0.61
ALPK3-201ENST00000258888 TRBV6-7A0A0A0MS04 114 aa11.27□□□□□ -0.61
ALPK3-201ENST00000258888 ABCA2Q9BZC7 2435 aa11.27□□□□□ -0.61
ALPK3-201ENST00000258888 GFI1Q99684 422 aa11.26□□□□□ -0.61
ALPK3-201ENST00000258888 H0YIZ8 118 aa11.26□□□□□ -0.61
ALPK3-201ENST00000258888 FOXH1O75593 365 aa11.26□□□□□ -0.61
ALPK3-201ENST00000258888 RNASE4P34096 147 aaKnown RBP11.26□□□□□ -0.61
ALPK3-201ENST00000258888 PAPPA-AS1Q5QFB9 102 aa11.26□□□□□ -0.61
ALPK3-201ENST00000258888 CENPVQ7Z7K6 275 aaPredicted RBP11.26□□□□□ -0.61
ALPK3-201ENST00000258888 C9orf106Q8NAJ2 232 aa11.26□□□□□ -0.61
ALPK3-201ENST00000258888 WBP1Q96G27 269 aa11.26□□□□□ -0.61
ALPK3-201ENST00000258888 SCGB3A1Q96QR1 104 aa11.26□□□□□ -0.61
ALPK3-201ENST00000258888 C1QTNF9BB2RNN3 333 aa11.26□□□□□ -0.61
ALPK3-201ENST00000258888 PPP1R27Q86WC6 154 aa11.26□□□□□ -0.61
ALPK3-201ENST00000258888 C1orf162Q8NEQ5 155 aaPredicted RBP11.26□□□□□ -0.61
ALPK3-201ENST00000258888 IZUMO1RA6ND01 250 aa11.26□□□□□ -0.61
ALPK3-201ENST00000258888 IQCF6A8MYZ5 107 aa11.26□□□□□ -0.61
ALPK3-201ENST00000258888 MRAP2Q96G30 205 aa11.26□□□□□ -0.61
ALPK3-201ENST00000258888 MESP1Q9BRJ9 268 aa11.26□□□□□ -0.61
ALPK3-201ENST00000258888 C1QTNF9P0C862 333 aa11.26□□□□□ -0.61
ALPK3-201ENST00000258888 CCL3L1P16619 93 aa11.26□□□□□ -0.61
ALPK3-201ENST00000258888 CIARTQ8N365 385 aaPredicted RBP11.26□□□□□ -0.61
ALPK3-201ENST00000258888 IGKV1D-8A0A087WSZ0 117 aa11.26□□□□□ -0.61
ALPK3-201ENST00000258888 LHX2P50458 406 aa11.25□□□□□ -0.61
ALPK3-201ENST00000258888 RPL23P62829 140 aaKnown RBP11.25□□□□□ -0.61
ALPK3-201ENST00000258888 WFDC1Q9HC57 220 aa11.25□□□□□ -0.61
ALPK3-201ENST00000258888 LINC00312Q9Y6C7 94 aa11.25□□□□□ -0.61
ALPK3-201ENST00000258888 A0A0A6YYD4 124 aa11.25□□□□□ -0.61
ALPK3-201ENST00000258888 SMAD7O15105 426 aaKnown RBP11.25□□□□□ -0.61
ALPK3-201ENST00000258888 EFEMP2O95967 443 aa11.25□□□□□ -0.61
ALPK3-201ENST00000258888 DNAL4O96015 105 aa11.25□□□□□ -0.61
ALPK3-201ENST00000258888 LINC00587B1AMM8 73 aa11.25□□□□□ -0.61
ALPK3-201ENST00000258888 NRN1Q9NPD7 142 aa11.25□□□□□ -0.61
ALPK3-201ENST00000258888 CACNG8Q8WXS5 425 aa11.25□□□□□ -0.61
ALPK3-201ENST00000258888 SONP18583 2426 aaKnown RBP11.25□□□□□ -0.61
ALPK3-201ENST00000258888 IGLV3-19P01714 112 aa11.24□□□□□ -0.61
ALPK3-201ENST00000258888 ZNF324BQ6AW86 544 aaPredicted RBP11.24□□□□□ -0.61
ALPK3-201ENST00000258888 OR13C6PQ8NH95 151 aa11.24□□□□□ -0.61
ALPK3-201ENST00000258888 FLVCR1-AS1Q8TAF5 88 aa11.24□□□□□ -0.61
ALPK3-201ENST00000258888 PGPEP1LA6NFU8 196 aa11.24□□□□□ -0.61
ALPK3-201ENST00000258888 J3QRE1 110 aa11.24□□□□□ -0.61
ALPK3-201ENST00000258888 CLEC19AQ6UXS0 136 aa11.24□□□□□ -0.61
ALPK3-201ENST00000258888 NDUFA3O95167 84 aa11.24□□□□□ -0.61
ALPK3-201ENST00000258888 LEPP41159 167 aa11.24□□□□□ -0.61
ALPK3-201ENST00000258888 ZNF497Q6ZNH5 498 aa11.24□□□□□ -0.61
ALPK3-201ENST00000258888 FAM71F2Q6NXP2 309 aa11.24□□□□□ -0.61
ALPK3-201ENST00000258888 OR5A1Q8NGJ0 315 aa11.24□□□□□ -0.61
ALPK3-201ENST00000258888 GFRA3O60609 400 aa11.24□□□□□ -0.61
ALPK3-201ENST00000258888 TGFAP01135 160 aa11.24□□□□□ -0.61
ALPK3-201ENST00000258888 IGHV3-11P01762 117 aa11.24□□□□□ -0.61
ALPK3-201ENST00000258888 CLDN16Q9Y5I7 305 aa11.24□□□□□ -0.61
ALPK3-201ENST00000258888 SEMA5BQ9P283 1151 aa11.24□□□□□ -0.61
ALPK3-201ENST00000258888 CCL1P22362 96 aa11.23□□□□□ -0.61
ALPK3-201ENST00000258888 TNFRSF18Q9Y5U5 241 aa11.23□□□□□ -0.61
ALPK3-201ENST00000258888 FBLN5Q9UBX5 448 aa11.23□□□□□ -0.61
ALPK3-201ENST00000258888 ATP5LO75964 103 aa11.23□□□□□ -0.61
ALPK3-201ENST00000258888 PRB4P10163 310 aaPredicted RBP11.23□□□□□ -0.61
ALPK3-201ENST00000258888 FAM90A1Q86YD7 464 aa11.23□□□□□ -0.61
ALPK3-201ENST00000258888 FER1L6-AS1Q8NA97 138 aa11.23□□□□□ -0.61
ALPK3-201ENST00000258888 RNASEH2CQ8TDP1 164 aaKnown RBP11.23□□□□□ -0.61
ALPK3-201ENST00000258888 ZNF319Q9P2F9 582 aa11.23□□□□□ -0.61
ALPK3-201ENST00000258888 PRDM13Q9H4Q3 707 aa11.23□□□□□ -0.61
ALPK3-201ENST00000258888 LTBRP36941 435 aa11.23□□□□□ -0.61
ALPK3-201ENST00000258888 ORMDL3Q8N138 153 aa11.23□□□□□ -0.61
ALPK3-201ENST00000258888 TEX29Q8N6K0 151 aa11.23□□□□□ -0.61
ALPK3-201ENST00000258888 DEPPQ9NTK1 212 aa11.23□□□□□ -0.61
ALPK3-201ENST00000258888 PTPN13Q12923 2485 aa11.23□□□□□ -0.61
ALPK3-201ENST00000258888 H7C1H1 209 aa11.23□□□□□ -0.61
ALPK3-201ENST00000258888 TMEM262E9PQX1 116 aa11.22□□□□□ -0.61
ALPK3-201ENST00000258888 MRPS16Q9Y3D3 137 aaKnown RBP11.22□□□□□ -0.61
ALPK3-201ENST00000258888 ZNF883P0CG24 379 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms