RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 SMG1Q96Q15 3661 aaKnown RBP12.33□□□□□ -0.44
DDX56-201ENST00000258772 PPIAL4EA0A075B759 164 aa12.33□□□□□ -0.44
DDX56-201ENST00000258772 CGB1A6NKQ9 187 aa12.33□□□□□ -0.44
DDX56-201ENST00000258772 PPIAL4DF5H284 164 aa12.33□□□□□ -0.44
DDX56-201ENST00000258772 C16orf97H3BN30 126 aa12.33□□□□□ -0.44
DDX56-201ENST00000258772 PPIAL4FP0DN26 164 aa12.33□□□□□ -0.44
DDX56-201ENST00000258772 MGST1P10620 155 aaKnown RBP12.33□□□□□ -0.44
DDX56-201ENST00000258772 UBE2L3P68036 154 aaKnown RBP12.33□□□□□ -0.44
DDX56-201ENST00000258772 SLC35B1P78383 322 aa12.33□□□□□ -0.44
DDX56-201ENST00000258772 COX19Q49B96 90 aa12.33□□□□□ -0.44
DDX56-201ENST00000258772 TPTE2P1Q5T6R2 138 aa12.33□□□□□ -0.44
DDX56-201ENST00000258772 TOMM20LQ6UXN7 152 aa12.33□□□□□ -0.44
DDX56-201ENST00000258772 TMEM136Q6ZRR5 245 aa12.33□□□□□ -0.44
DDX56-201ENST00000258772 WFDC8Q8IUA0 241 aa12.33□□□□□ -0.44
DDX56-201ENST00000258772 SNHG12Q9BXW3 62 aa12.33□□□□□ -0.44
DDX56-201ENST00000258772 FNDC4Q9H6D8 234 aaPredicted RBP12.33□□□□□ -0.44
DDX56-201ENST00000258772 GNB4Q9HAV0 340 aa12.33□□□□□ -0.44
DDX56-201ENST00000258772 PPIAL4AQ9Y536 164 aa12.33□□□□□ -0.44
DDX56-201ENST00000258772 PCNX1Q96RV3 2341 aa12.33□□□□□ -0.44
DDX56-201ENST00000258772 TCL1AP56279 114 aa12.32□□□□□ -0.44
DDX56-201ENST00000258772 TGIF2LXQ8IUE1 241 aa12.32□□□□□ -0.44
DDX56-201ENST00000258772 OR10X1Q8NGY0 326 aa12.32□□□□□ -0.44
DDX56-201ENST00000258772 OR4A5Q8NH83 315 aa12.32□□□□□ -0.44
DDX56-201ENST00000258772 VSTM2AQ8TAG5 236 aa12.32□□□□□ -0.44
DDX56-201ENST00000258772 A0A0G2JNJ9 132 aa12.32□□□□□ -0.44
DDX56-201ENST00000258772 SMIM27A0A1W2PRY6 76 aa12.32□□□□□ -0.44
DDX56-201ENST00000258772 TMEM178BH3BS89 294 aa12.32□□□□□ -0.44
DDX56-201ENST00000258772 TEX43Q6ZNM6 134 aa12.32□□□□□ -0.44
DDX56-201ENST00000258772 PDPNQ86YL7 162 aa12.32□□□□□ -0.44
DDX56-201ENST00000258772 H1FXQ92522 213 aaKnown RBP12.32□□□□□ -0.44
DDX56-201ENST00000258772 NPIPB3Q92617 1050 aa12.32□□□□□ -0.44
DDX56-201ENST00000258772 TMEM186Q96B77 213 aa12.32□□□□□ -0.44
DDX56-201ENST00000258772 LINC00479Q96M42 142 aa12.32□□□□□ -0.44
DDX56-201ENST00000258772 SAMD10Q9BYL1 202 aa12.32□□□□□ -0.44
DDX56-201ENST00000258772 SAP30LQ9HAJ7 183 aa12.32□□□□□ -0.44
DDX56-201ENST00000258772 Q9UFV3 132 aa12.32□□□□□ -0.44
DDX56-201ENST00000258772 CDC42EP3Q9UKI2 254 aa12.32□□□□□ -0.44
DDX56-201ENST00000258772 MGAQ8IWI9 3026 aa12.32□□□□□ -0.44
DDX56-201ENST00000258772 IGLV2-23P01705 113 aa12.31□□□□□ -0.44
DDX56-201ENST00000258772 CDKN1AP38936 164 aa12.31□□□□□ -0.44
DDX56-201ENST00000258772 BSPH1Q075Z2 132 aa12.31□□□□□ -0.44
DDX56-201ENST00000258772 KIAA1644Q3SXP7 199 aa12.31□□□□□ -0.44
DDX56-201ENST00000258772 TDRG1Q3Y452 100 aa12.31□□□□□ -0.44
DDX56-201ENST00000258772 C10orf55Q5SWW7 151 aa12.31□□□□□ -0.44
DDX56-201ENST00000258772 PATE2Q6UY27 113 aa12.31□□□□□ -0.44
DDX56-201ENST00000258772 ZNF596Q8TC21 504 aa12.31□□□□□ -0.44
DDX56-201ENST00000258772 SERTAD4Q9NUC0 356 aa12.31□□□□□ -0.44
DDX56-201ENST00000258772 DMXL1Q9Y485 3027 aa12.31□□□□□ -0.44
DDX56-201ENST00000258772 COX7A2P2O60397 106 aa12.31□□□□□ -0.44
DDX56-201ENST00000258772 PYYP10082 97 aa12.31□□□□□ -0.44
DDX56-201ENST00000258772 SUB1P53999 127 aaKnown RBP eCLIP12.31□□□□□ -0.44
DDX56-201ENST00000258772 NUTF2P61970 127 aaKnown RBP12.31□□□□□ -0.44
DDX56-201ENST00000258772 C10orf113Q5VZT2 155 aa12.31□□□□□ -0.44
DDX56-201ENST00000258772 FAM71F2Q6NXP2 309 aa12.31□□□□□ -0.44
DDX56-201ENST00000258772 LYPD2Q6UXB3 125 aa12.31□□□□□ -0.44
DDX56-201ENST00000258772 LINC00311Q8N616 119 aa12.31□□□□□ -0.44
DDX56-201ENST00000258772 OR1L4Q8NGR5 311 aa12.31□□□□□ -0.44
DDX56-201ENST00000258772 CCL17Q92583 94 aa12.31□□□□□ -0.44
DDX56-201ENST00000258772 ST6GALNAC6Q969X2 333 aa12.31□□□□□ -0.44
DDX56-201ENST00000258772 ZNF430Q9H8G1 570 aaPredicted RBP12.31□□□□□ -0.44
DDX56-201ENST00000258772 ZNF355PQ9NSJ1 428 aa12.31□□□□□ -0.44
DDX56-201ENST00000258772 PKDREJQ9NTG1 2253 aa12.3□□□□□ -0.44
DDX56-201ENST00000258772 IGKV1D-37A0A075B6S9 117 aa12.3□□□□□ -0.44
DDX56-201ENST00000258772 TCRBV4S1A1TA0A5B7 111 aa12.3□□□□□ -0.44
DDX56-201ENST00000258772 M0R143 59 aa12.3□□□□□ -0.44
DDX56-201ENST00000258772 TNFRSF13BO14836 293 aaPredicted RBP12.3□□□□□ -0.44
DDX56-201ENST00000258772 IGHV3-48P01763 117 aa12.3□□□□□ -0.44
DDX56-201ENST00000258772 GPX1P07203 203 aa12.3□□□□□ -0.44
DDX56-201ENST00000258772 BRS3P32247 399 aa12.3□□□□□ -0.44
DDX56-201ENST00000258772 OR10J3Q5JRS4 329 aa12.3□□□□□ -0.44
DDX56-201ENST00000258772 MRPL54Q6P161 138 aaKnown RBP12.3□□□□□ -0.44
DDX56-201ENST00000258772 NHLRC2Q8NBF2 726 aa12.3□□□□□ -0.44
DDX56-201ENST00000258772 PAXXQ9BUH6 204 aa12.3□□□□□ -0.44
DDX56-201ENST00000258772 WASHC3Q9Y3C0 194 aa12.3□□□□□ -0.44
DDX56-201ENST00000258772 AMMECR1Q9Y4X0 333 aaPredicted RBP12.3□□□□□ -0.44
DDX56-201ENST00000258772 NDUFB3O43676 98 aa12.29□□□□□ -0.44
DDX56-201ENST00000258772 AMY1AP04745 511 aa12.29□□□□□ -0.44
DDX56-201ENST00000258772 THBDP07204 575 aa12.29□□□□□ -0.44
DDX56-201ENST00000258772 LRRC10Q5BKY1 277 aa12.29□□□□□ -0.44
DDX56-201ENST00000258772 SIGLECL1Q8N7X8 197 aa12.29□□□□□ -0.44
DDX56-201ENST00000258772 C8orf31Q8N9H6 132 aa12.29□□□□□ -0.44
DDX56-201ENST00000258772 FAM168AQ92567 244 aa12.29□□□□□ -0.44
DDX56-201ENST00000258772 ZNF318Q5VUA4 2279 aa12.29□□□□□ -0.44
DDX56-201ENST00000258772 HLA-DQA1P01909 254 aa12.29□□□□□ -0.44
DDX56-201ENST00000258772 RAB4AP20338 218 aa12.29□□□□□ -0.44
DDX56-201ENST00000258772 THAP8Q8NA92 274 aa12.29□□□□□ -0.44
DDX56-201ENST00000258772 VN1R17PQ8TDU5 208 aa12.29□□□□□ -0.44
DDX56-201ENST00000258772 C20orf144Q9BQM9 153 aa12.29□□□□□ -0.44
DDX56-201ENST00000258772 MRPL36Q9P0J6 103 aaKnown RBP12.29□□□□□ -0.44
DDX56-201ENST00000258772 IZUMO1RA6ND01 250 aa12.28□□□□□ -0.44
DDX56-201ENST00000258772 FSTL3O95633 263 aa12.28□□□□□ -0.44
DDX56-201ENST00000258772 CA1P00915 261 aaPredicted RBP12.28□□□□□ -0.44
DDX56-201ENST00000258772 ZNF329Q86UD4 541 aa12.28□□□□□ -0.44
DDX56-201ENST00000258772 BMPR1BO00238 502 aa12.28□□□□□ -0.44
DDX56-201ENST00000258772 PRRG2O14669 202 aa12.28□□□□□ -0.44
DDX56-201ENST00000258772 COMPP49747 757 aaPredicted RBP12.28□□□□□ -0.44
DDX56-201ENST00000258772 FAM103A1Q9BTL3 118 aaKnown RBP12.28□□□□□ -0.44
DDX56-201ENST00000258772 SSBP3Q9BWW4 388 aaPredicted RBP12.28□□□□□ -0.44
DDX56-201ENST00000258772 FBXL7Q9UJT9 491 aa12.28□□□□□ -0.44
DDX56-201ENST00000258772 KLK10O43240 276 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms