RNA–Protein interactions for RNA: ENST00000254109.9

CLUHP3-201, Transcript of clustered mitochondria homolog pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CLUHP3, Length 1,812 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLUHP3-201ENST00000254109 RNF2Q99496 336 aa9.16□□□□□ -0.94
CLUHP3-201ENST00000254109 C12orf57Q99622 126 aa9.16□□□□□ -0.94
CLUHP3-201ENST00000254109 SSX3Q99909 188 aa9.16□□□□□ -0.94
CLUHP3-201ENST00000254109 TCEAL7Q9BRU2 100 aa9.16□□□□□ -0.94
CLUHP3-201ENST00000254109 TMEM167BQ9NRX6 74 aa9.16□□□□□ -0.94
CLUHP3-201ENST00000254109 ONECUT1Q9UBC0 465 aa9.16□□□□□ -0.94
CLUHP3-201ENST00000254109 MALRD1Q5VYJ5 2156 aa9.16□□□□□ -0.94
CLUHP3-201ENST00000254109 UNC79Q9P2D8 2635 aa9.16□□□□□ -0.94
CLUHP3-201ENST00000254109 IGHV1-3A0A0C4DH29 117 aa9.15□□□□□ -0.94
CLUHP3-201ENST00000254109 ZNF98A6NK75 572 aa9.15□□□□□ -0.94
CLUHP3-201ENST00000254109 VWC2LB2RUY7 222 aa9.15□□□□□ -0.94
CLUHP3-201ENST00000254109 E7EUB6 86 aa9.15□□□□□ -0.94
CLUHP3-201ENST00000254109 TRGC2P03986 189 aa9.15□□□□□ -0.94
CLUHP3-201ENST00000254109 COX7A1P24310 79 aa9.15□□□□□ -0.94
CLUHP3-201ENST00000254109 MEOX2P50222 304 aa9.15□□□□□ -0.94
CLUHP3-201ENST00000254109 MLANAQ16655 118 aa9.15□□□□□ -0.94
CLUHP3-201ENST00000254109 CLEC12BQ2HXU8 276 aa9.15□□□□□ -0.94
CLUHP3-201ENST00000254109 C10orf55Q5SWW7 151 aa9.15□□□□□ -0.94
CLUHP3-201ENST00000254109 ETFRF1Q6IPR1 90 aa9.15□□□□□ -0.94
CLUHP3-201ENST00000254109 MIR17HGQ75NE6 70 aa9.15□□□□□ -0.94
CLUHP3-201ENST00000254109 LINC01551Q86U37 167 aa9.15□□□□□ -0.94
CLUHP3-201ENST00000254109 NECAP1Q8NC96 275 aa9.15□□□□□ -0.94
CLUHP3-201ENST00000254109 OR5T1Q8NG75 326 aa9.15□□□□□ -0.94
CLUHP3-201ENST00000254109 PIMREGQ9BSJ6 248 aa9.15□□□□□ -0.94
CLUHP3-201ENST00000254109 YTHDF2Q9Y5A9 579 aaKnown RBP9.15□□□□□ -0.94
CLUHP3-201ENST00000254109 ARL2-SNX15V9GYD0 113 aa9.15□□□□□ -0.94
CLUHP3-201ENST00000254109 NAV2Q8IVL1 2488 aa9.15□□□□□ -0.94
CLUHP3-201ENST00000254109 VPS13CQ709C8 3753 aa9.15□□□□□ -0.94
CLUHP3-201ENST00000254109 IGKV1OR2-108A0A075B7D4 117 aa9.15□□□□□ -0.95
CLUHP3-201ENST00000254109 CGB1A6NKQ9 187 aa9.15□□□□□ -0.95
CLUHP3-201ENST00000254109 PPP1R2P9O14990 202 aa9.15□□□□□ -0.95
CLUHP3-201ENST00000254109 PFN1P07737 140 aaKnown RBP9.15□□□□□ -0.95
CLUHP3-201ENST00000254109 OR5G3P0C626 314 aa9.15□□□□□ -0.95
CLUHP3-201ENST00000254109 CD99P14209 185 aa9.15□□□□□ -0.95
CLUHP3-201ENST00000254109 SRP14P37108 136 aaKnown RBP9.15□□□□□ -0.95
CLUHP3-201ENST00000254109 NDUFA6P56556 154 aa9.15□□□□□ -0.95
CLUHP3-201ENST00000254109 PSG5Q15238 335 aa9.15□□□□□ -0.95
CLUHP3-201ENST00000254109 PRSS8Q16651 343 aa9.15□□□□□ -0.95
CLUHP3-201ENST00000254109 KCNIP4Q6PIL6 250 aa9.15□□□□□ -0.95
CLUHP3-201ENST00000254109 PQLC2Q6ZP29 291 aa9.15□□□□□ -0.95
CLUHP3-201ENST00000254109 OR2T6Q8NHC8 308 aa9.15□□□□□ -0.95
CLUHP3-201ENST00000254109 MBD6Q96DN6 1003 aa9.15□□□□□ -0.95
CLUHP3-201ENST00000254109 RITA1Q96K30 269 aa9.15□□□□□ -0.95
CLUHP3-201ENST00000254109 MRPL32Q9BYC8 188 aaKnown RBP9.15□□□□□ -0.95
CLUHP3-201ENST00000254109 ITPR2Q14571 2701 aa9.14□□□□□ -0.95
CLUHP3-201ENST00000254109 PRRC2AP48634 2157 aaKnown RBP9.14□□□□□ -0.95
CLUHP3-201ENST00000254109 IGHV4-61A0A0C4DH41 118 aa9.14□□□□□ -0.95
CLUHP3-201ENST00000254109 SCO2A0A1W2PP80 73 aa9.14□□□□□ -0.95
CLUHP3-201ENST00000254109 A0A1W2PPI3 338 aa9.14□□□□□ -0.95
CLUHP3-201ENST00000254109 GATA2P23769 480 aaPredicted RBP9.14□□□□□ -0.95
CLUHP3-201ENST00000254109 RPL27AP46776 148 aaKnown RBP9.14□□□□□ -0.95
CLUHP3-201ENST00000254109 TNXAQ16473 311 aa9.14□□□□□ -0.95
CLUHP3-201ENST00000254109 LY6G5BQ8NDX9 201 aa9.14□□□□□ -0.95
CLUHP3-201ENST00000254109 OR1L4Q8NGR5 311 aa9.14□□□□□ -0.95
CLUHP3-201ENST00000254109 TPSG1Q9NRR2 321 aa9.14□□□□□ -0.95
CLUHP3-201ENST00000254109 PDZD2O15018 2839 aa9.13□□□□□ -0.95
CLUHP3-201ENST00000254109 PPP5D1E7EU14 171 aa9.13□□□□□ -0.95
CLUHP3-201ENST00000254109 NDUFS8O00217 210 aa9.13□□□□□ -0.95
CLUHP3-201ENST00000254109 OR7C2O60412 319 aa9.13□□□□□ -0.95
CLUHP3-201ENST00000254109 CRYGBP07316 175 aa9.13□□□□□ -0.95
CLUHP3-201ENST00000254109 C8orf88P0DMB2 117 aa9.13□□□□□ -0.95
CLUHP3-201ENST00000254109 AREGP15514 252 aa9.13□□□□□ -0.95
CLUHP3-201ENST00000254109 DLX1P56177 255 aa9.13□□□□□ -0.95
CLUHP3-201ENST00000254109 LMO4P61968 165 aa9.13□□□□□ -0.95
CLUHP3-201ENST00000254109 PRB3Q04118 309 aaPredicted RBP9.13□□□□□ -0.95
CLUHP3-201ENST00000254109 Q5PR19 223 aa9.13□□□□□ -0.95
CLUHP3-201ENST00000254109 KRTAP1-3Q8IUG1 177 aa9.13□□□□□ -0.95
CLUHP3-201ENST00000254109 LRRC75A-AS1Q8N1F1 130 aa9.13□□□□□ -0.95
CLUHP3-201ENST00000254109 NPIPB3Q92617 1050 aa9.13□□□□□ -0.95
CLUHP3-201ENST00000254109 PFDN5Q99471 154 aa9.13□□□□□ -0.95
CLUHP3-201ENST00000254109 RNF5Q99942 180 aa9.13□□□□□ -0.95
CLUHP3-201ENST00000254109 PYGO2Q9BRQ0 406 aa9.13□□□□□ -0.95
CLUHP3-201ENST00000254109 DERL1Q9BUN8 251 aa9.13□□□□□ -0.95
CLUHP3-201ENST00000254109 SRD5A3Q9H8P0 318 aa9.13□□□□□ -0.95
CLUHP3-201ENST00000254109 DNAJC4Q9NNZ3 241 aa9.13□□□□□ -0.95
CLUHP3-201ENST00000254109 SIGLEC9Q9Y336 463 aa9.13□□□□□ -0.95
CLUHP3-201ENST00000254109 CSMD1Q96PZ7 3565 aa9.13□□□□□ -0.95
CLUHP3-201ENST00000254109 MDFIC2A0A1B0GVS7 189 aa9.12□□□□□ -0.95
CLUHP3-201ENST00000254109 TCRBV4S1A1TA0A5B7 111 aa9.12□□□□□ -0.95
CLUHP3-201ENST00000254109 COX7A2P2O60397 106 aa9.12□□□□□ -0.95
CLUHP3-201ENST00000254109 HIST1H2BKO60814 126 aa9.12□□□□□ -0.95
CLUHP3-201ENST00000254109 REG1AP05451 166 aa9.12□□□□□ -0.95
CLUHP3-201ENST00000254109 HIST1H2BJP06899 126 aa9.12□□□□□ -0.95
CLUHP3-201ENST00000254109 SMIM6P0DI80 62 aa9.12□□□□□ -0.95
CLUHP3-201ENST00000254109 HOXA5P20719 270 aa9.12□□□□□ -0.95
CLUHP3-201ENST00000254109 HIST1H2BOP23527 126 aa9.12□□□□□ -0.95
CLUHP3-201ENST00000254109 HIST1H2BBP33778 126 aa9.12□□□□□ -0.95
CLUHP3-201ENST00000254109 HIST1H2BDP58876 126 aa9.12□□□□□ -0.95
CLUHP3-201ENST00000254109 DSCR9P59020 149 aa9.12□□□□□ -0.95
CLUHP3-201ENST00000254109 SELENOTP62341 195 aa9.12□□□□□ -0.95
CLUHP3-201ENST00000254109 HIST1H2BCP62807 126 aa9.12□□□□□ -0.95
CLUHP3-201ENST00000254109 HIST2H2BEQ16778 126 aa9.12□□□□□ -0.95
CLUHP3-201ENST00000254109 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.12□□□□□ -0.95
CLUHP3-201ENST00000254109 OR2T10Q8NGZ9 312 aa9.12□□□□□ -0.95
CLUHP3-201ENST00000254109 C22orf15Q8WYQ4 148 aa9.12□□□□□ -0.95
CLUHP3-201ENST00000254109 HIST1H2BHQ93079 126 aa9.12□□□□□ -0.95
CLUHP3-201ENST00000254109 C11orf52Q96A22 123 aa9.12□□□□□ -0.95
CLUHP3-201ENST00000254109 BTF3L4Q96K17 158 aa9.12□□□□□ -0.95
CLUHP3-201ENST00000254109 HIST1H2BNQ99877 126 aa9.12□□□□□ -0.95
CLUHP3-201ENST00000254109 HIST1H2BMQ99879 126 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms