RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 IGHV3-72A0A0B4J1Y9 119 aa11.08□□□□□ -0.64
PCDHGA3-201ENST00000253812 IGHV5-10-1A0A0J9YXX1 117 aa11.08□□□□□ -0.64
PCDHGA3-201ENST00000253812 ZNF721Q8TF20 911 aa11.08□□□□□ -0.64
PCDHGA3-201ENST00000253812 IGKV1D-42A0A075B6H8 117 aa11.08□□□□□ -0.64
PCDHGA3-201ENST00000253812 IGKV3D-11A0A0A0MRZ8 115 aa11.08□□□□□ -0.64
PCDHGA3-201ENST00000253812 TMEM238C9JI98 176 aa11.08□□□□□ -0.64
PCDHGA3-201ENST00000253812 M0R2P5 195 aa11.08□□□□□ -0.64
PCDHGA3-201ENST00000253812 IGKV3-11P04433 115 aa11.08□□□□□ -0.64
PCDHGA3-201ENST00000253812 MST1P26927 711 aa11.08□□□□□ -0.64
PCDHGA3-201ENST00000253812 C1QL2Q7Z5L3 287 aa11.08□□□□□ -0.64
PCDHGA3-201ENST00000253812 CHTOPQ9Y3Y2 248 aaKnown RBP11.08□□□□□ -0.64
PCDHGA3-201ENST00000253812 IGHV3-48P01763 117 aa11.08□□□□□ -0.64
PCDHGA3-201ENST00000253812 PIKFYVEQ9Y2I7 2098 aa11.07□□□□□ -0.64
PCDHGA3-201ENST00000253812 AKAP6Q13023 2319 aa11.07□□□□□ -0.64
PCDHGA3-201ENST00000253812 CRIPAKQ8N1N5 446 aa11.07□□□□□ -0.64
PCDHGA3-201ENST00000253812 CCL13Q99616 98 aa11.07□□□□□ -0.64
PCDHGA3-201ENST00000253812 CACNA1HO95180 2353 aa11.07□□□□□ -0.64
PCDHGA3-201ENST00000253812 ZNF646O15015 1829 aaPredicted RBP11.07□□□□□ -0.64
PCDHGA3-201ENST00000253812 C9JCJ5 164 aa11.07□□□□□ -0.64
PCDHGA3-201ENST00000253812 NPFFO15130 113 aa11.07□□□□□ -0.64
PCDHGA3-201ENST00000253812 IGHV2-5P01817 119 aa11.07□□□□□ -0.64
PCDHGA3-201ENST00000253812 CRYBA2P53672 197 aa11.07□□□□□ -0.64
PCDHGA3-201ENST00000253812 RHOGP84095 191 aa11.07□□□□□ -0.64
PCDHGA3-201ENST00000253812 ABCA7Q8IZY2 2146 aa11.07□□□□□ -0.64
PCDHGA3-201ENST00000253812 SPANXCQ9NY87 97 aa11.07□□□□□ -0.64
PCDHGA3-201ENST00000253812 Q9H3A6 140 aa11.07□□□□□ -0.64
PCDHGA3-201ENST00000253812 PRDM6Q9NQX0 595 aa11.07□□□□□ -0.64
PCDHGA3-201ENST00000253812 TNFRSF18Q9Y5U5 241 aa11.07□□□□□ -0.64
PCDHGA3-201ENST00000253812 GAGE12HA6NDE8 117 aa11.07□□□□□ -0.64
PCDHGA3-201ENST00000253812 GAGE12JA6NER3 117 aa11.07□□□□□ -0.64
PCDHGA3-201ENST00000253812 GAGE7O76087 117 aa11.07□□□□□ -0.64
PCDHGA3-201ENST00000253812 GAGE12FP0CL80 117 aa11.07□□□□□ -0.64
PCDHGA3-201ENST00000253812 GAGE12GP0CL81 117 aa11.07□□□□□ -0.64
PCDHGA3-201ENST00000253812 GAGE12IP0CL82 117 aa11.07□□□□□ -0.64
PCDHGA3-201ENST00000253812 GAGE4Q13068 117 aa11.07□□□□□ -0.64
PCDHGA3-201ENST00000253812 PMS2CLQ68D20 193 aa11.07□□□□□ -0.64
PCDHGA3-201ENST00000253812 FGF11Q92914 225 aa11.07□□□□□ -0.64
PCDHGA3-201ENST00000253812 WDR83OSQ9Y284 106 aa11.07□□□□□ -0.64
PCDHGA3-201ENST00000253812 hCG_38984A0A1B0GV85 526 aa11.06□□□□□ -0.64
PCDHGA3-201ENST00000253812 IGHMP01871 453 aa11.06□□□□□ -0.64
PCDHGA3-201ENST00000253812 IGLC2P0DOY2 106 aa11.06□□□□□ -0.64
PCDHGA3-201ENST00000253812 IGLC3P0DOY3 106 aa11.06□□□□□ -0.64
PCDHGA3-201ENST00000253812 IGFBP3P17936 291 aaPredicted RBP11.06□□□□□ -0.64
PCDHGA3-201ENST00000253812 ETDBQ3ZM63 59 aa11.06□□□□□ -0.64
PCDHGA3-201ENST00000253812 DYNLRB2Q8TF09 96 aa11.06□□□□□ -0.64
PCDHGA3-201ENST00000253812 CT55Q8WUE5 264 aa11.06□□□□□ -0.64
PCDHGA3-201ENST00000253812 OTORQ9NRC9 128 aa11.06□□□□□ -0.64
PCDHGA3-201ENST00000253812 CEACAM4O75871 244 aa11.06□□□□□ -0.64
PCDHGA3-201ENST00000253812 GFRALQ6UXV0 394 aa11.06□□□□□ -0.64
PCDHGA3-201ENST00000253812 SLC25A48Q6ZT89 311 aaKnown RBP11.06□□□□□ -0.64
PCDHGA3-201ENST00000253812 RPRMLQ8N4K4 120 aa11.06□□□□□ -0.64
PCDHGA3-201ENST00000253812 FABP5P3A8MUU1 101 aa11.06□□□□□ -0.64
PCDHGA3-201ENST00000253812 PROB1E7EW31 1015 aa11.06□□□□□ -0.64
PCDHGA3-201ENST00000253812 NPPCP23582 126 aa11.06□□□□□ -0.64
PCDHGA3-201ENST00000253812 GTSCR1Q86UQ5 136 aa11.06□□□□□ -0.64
PCDHGA3-201ENST00000253812 OSR1Q8TAX0 266 aaPredicted RBP11.06□□□□□ -0.64
PCDHGA3-201ENST00000253812 PTPRFP10586 1907 aa11.06□□□□□ -0.64
PCDHGA3-201ENST00000253812 AGFG2O95081 481 aa11.05□□□□□ -0.64
PCDHGA3-201ENST00000253812 CD3EP07766 207 aa11.05□□□□□ -0.64
PCDHGA3-201ENST00000253812 ZNF826PQ6ZT77 177 aa11.05□□□□□ -0.64
PCDHGA3-201ENST00000253812 ARPC1AQ92747 370 aa11.05□□□□□ -0.64
PCDHGA3-201ENST00000253812 RGPD3A6NKT7 1758 aaPredicted RBP11.05□□□□□ -0.64
PCDHGA3-201ENST00000253812 REG1AP05451 166 aa11.05□□□□□ -0.64
PCDHGA3-201ENST00000253812 MORN3Q6PF18 240 aaPredicted RBP11.05□□□□□ -0.64
PCDHGA3-201ENST00000253812 PPDPFLQ8WWR9 84 aa11.05□□□□□ -0.64
PCDHGA3-201ENST00000253812 LY96Q9Y6Y9 160 aa11.05□□□□□ -0.64
PCDHGA3-201ENST00000253812 ESPL1Q14674 2120 aa11.05□□□□□ -0.64
PCDHGA3-201ENST00000253812 NOTCH2Q04721 2471 aa11.05□□□□□ -0.64
PCDHGA3-201ENST00000253812 C9orf118A6NHY6 69 aa11.05□□□□□ -0.64
PCDHGA3-201ENST00000253812 F8W1H4 67 aa11.05□□□□□ -0.64
PCDHGA3-201ENST00000253812 AZU1P20160 251 aa11.05□□□□□ -0.64
PCDHGA3-201ENST00000253812 IFI27P40305 119 aaPredicted RBP11.05□□□□□ -0.64
PCDHGA3-201ENST00000253812 SPINK14Q6IE38 97 aa11.05□□□□□ -0.64
PCDHGA3-201ENST00000253812 SMAD7O15105 426 aaKnown RBP11.05□□□□□ -0.64
PCDHGA3-201ENST00000253812 Q0VG73 95 aa11.05□□□□□ -0.64
PCDHGA3-201ENST00000253812 RRN3P1Q2M238 152 aa11.05□□□□□ -0.64
PCDHGA3-201ENST00000253812 C1orf122Q6ZSJ8 110 aa11.05□□□□□ -0.64
PCDHGA3-201ENST00000253812 C17orf98A8MV24 154 aa11.04□□□□□ -0.64
PCDHGA3-201ENST00000253812 IFITM1P13164 125 aa11.04□□□□□ -0.64
PCDHGA3-201ENST00000253812 GAGE5Q13069 117 aa11.04□□□□□ -0.64
PCDHGA3-201ENST00000253812 GAGE6Q13070 117 aa11.04□□□□□ -0.64
PCDHGA3-201ENST00000253812 SLC25A45Q8N413 288 aa11.04□□□□□ -0.64
PCDHGA3-201ENST00000253812 ASCL2Q99929 193 aa11.04□□□□□ -0.64
PCDHGA3-201ENST00000253812 SLC25A20O43772 301 aa11.04□□□□□ -0.64
PCDHGA3-201ENST00000253812 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.04□□□□□ -0.64
PCDHGA3-201ENST00000253812 PEAR1Q5VY43 1037 aaPredicted RBP11.04□□□□□ -0.64
PCDHGA3-201ENST00000253812 PILRAQ9UKJ1 303 aa11.04□□□□□ -0.64
PCDHGA3-201ENST00000253812 MAGEA5P43359 124 aa11.04□□□□□ -0.64
PCDHGA3-201ENST00000253812 CLEC7AQ9BXN2 247 aa11.04□□□□□ -0.64
PCDHGA3-201ENST00000253812 ZNF501Q96CX3 271 aaPredicted RBP11.03□□□□□ -0.64
PCDHGA3-201ENST00000253812 ZNF71Q9NQZ8 489 aaPredicted RBP11.03□□□□□ -0.64
PCDHGA3-201ENST00000253812 IGKV3OR2-268A0A0C4DH90 116 aa11.03□□□□□ -0.64
PCDHGA3-201ENST00000253812 SPAARA0A1B0GVQ0 90 aa11.03□□□□□ -0.64
PCDHGA3-201ENST00000253812 LTBRP36941 435 aa11.03□□□□□ -0.64
PCDHGA3-201ENST00000253812 EFNB3Q15768 340 aa11.03□□□□□ -0.64
PCDHGA3-201ENST00000253812 DMRTC2Q8IXT2 367 aaPredicted RBP11.03□□□□□ -0.64
PCDHGA3-201ENST00000253812 CHD5Q8TDI0 1954 aa11.03□□□□□ -0.64
PCDHGA3-201ENST00000253812 VSIRQ9H7M9 311 aa11.03□□□□□ -0.64
PCDHGA3-201ENST00000253812 C12orf77C9JDV5 145 aa11.03□□□□□ -0.64
PCDHGA3-201ENST00000253812 NPIPB11E5RHQ5 1161 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms