RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 MRPL32Q9BYC8 188 aaKnown RBP15.72■□□□□ 0.11
CDC42EP1-201ENST00000249014 DNAJC4Q9NNZ3 241 aa15.72■□□□□ 0.11
CDC42EP1-201ENST00000249014 JOSD1Q15040 202 aaPredicted RBP15.72■□□□□ 0.11
CDC42EP1-201ENST00000249014 RUSC1-AS1Q66K80 236 aa15.72■□□□□ 0.11
CDC42EP1-201ENST00000249014 RALYQ9UKM9 306 aaKnown RBP15.72■□□□□ 0.11
CDC42EP1-201ENST00000249014 LRBAP50851 2863 aa15.71■□□□□ 0.11
CDC42EP1-201ENST00000249014 IGHV2-26A0A0B4J1V2 119 aa15.71■□□□□ 0.11
CDC42EP1-201ENST00000249014 SIAH2O43255 324 aa15.71■□□□□ 0.11
CDC42EP1-201ENST00000249014 GZMBP10144 247 aa15.71■□□□□ 0.11
CDC42EP1-201ENST00000249014 CNTFRP26992 372 aa15.71■□□□□ 0.11
CDC42EP1-201ENST00000249014 SUB1P53999 127 aaKnown RBP eCLIP15.71■□□□□ 0.11
CDC42EP1-201ENST00000249014 PATE2Q6UY27 113 aa15.71■□□□□ 0.11
CDC42EP1-201ENST00000249014 ZNF841Q6ZN19 808 aa15.71■□□□□ 0.11
CDC42EP1-201ENST00000249014 V9GYV3 84 aa15.71■□□□□ 0.11
CDC42EP1-201ENST00000249014 MALRD1Q5VYJ5 2156 aa15.71■□□□□ 0.11
CDC42EP1-201ENST00000249014 DCHS2Q6V1P9 2916 aa15.7■□□□□ 0.1
CDC42EP1-201ENST00000249014 A0A1B0GUS0 222 aa15.7■□□□□ 0.1
CDC42EP1-201ENST00000249014 A0A1W2PRE2 83 aa15.7■□□□□ 0.1
CDC42EP1-201ENST00000249014 FAM90A27PA6NNH2 459 aa15.7■□□□□ 0.1
CDC42EP1-201ENST00000249014 ERVFC1-1P60608 527 aa15.7■□□□□ 0.1
CDC42EP1-201ENST00000249014 YPEL3P61236 119 aaPredicted RBP15.7■□□□□ 0.1
CDC42EP1-201ENST00000249014 FAM209BQ5JX69 171 aa15.7■□□□□ 0.1
CDC42EP1-201ENST00000249014 TCRBV4S1A1TA0A5B7 111 aa15.7■□□□□ 0.1
CDC42EP1-201ENST00000249014 IGLC7A0M8Q6 106 aa15.7■□□□□ 0.1
CDC42EP1-201ENST00000249014 IGLV1-47P01700 117 aa15.7■□□□□ 0.1
CDC42EP1-201ENST00000249014 ADMP35318 185 aa15.7■□□□□ 0.1
CDC42EP1-201ENST00000249014 LGALS7P47929 136 aa15.7■□□□□ 0.1
CDC42EP1-201ENST00000249014 OR5AU1Q8NGC0 362 aa15.7■□□□□ 0.1
CDC42EP1-201ENST00000249014 PYYP10082 97 aa15.69■□□□□ 0.1
CDC42EP1-201ENST00000249014 UBE2L3P68036 154 aaKnown RBP15.69■□□□□ 0.1
CDC42EP1-201ENST00000249014 MUC15Q8N387 334 aa15.69■□□□□ 0.1
CDC42EP1-201ENST00000249014 THAP8Q8NA92 274 aa15.69■□□□□ 0.1
CDC42EP1-201ENST00000249014 OR5R1Q8NH85 324 aa15.69■□□□□ 0.1
CDC42EP1-201ENST00000249014 ZNF355PQ9NSJ1 428 aa15.69■□□□□ 0.1
CDC42EP1-201ENST00000249014 COX7A2P2O60397 106 aa15.69■□□□□ 0.1
CDC42EP1-201ENST00000249014 FRMD6-AS1P0C7T7 363 aa15.69■□□□□ 0.1
CDC42EP1-201ENST00000249014 CBLN1P23435 193 aa15.69■□□□□ 0.1
CDC42EP1-201ENST00000249014 MFAP2P55001 183 aa15.69■□□□□ 0.1
CDC42EP1-201ENST00000249014 LGALS4P56470 323 aa15.69■□□□□ 0.1
CDC42EP1-201ENST00000249014 HCP5Q6MZN7 132 aa15.69■□□□□ 0.1
CDC42EP1-201ENST00000249014 C19orf35Q6ZS72 473 aa15.69■□□□□ 0.1
CDC42EP1-201ENST00000249014 RNASE7Q9H1E1 156 aaKnown RBP15.69■□□□□ 0.1
CDC42EP1-201ENST00000249014 ZZEF1O43149 2961 aa15.68■□□□□ 0.1
CDC42EP1-201ENST00000249014 TACC2O95359 2948 aa15.68■□□□□ 0.1
CDC42EP1-201ENST00000249014 FSTL3O95633 263 aa15.68■□□□□ 0.1
CDC42EP1-201ENST00000249014 IGLV2-8P01709 118 aa15.68■□□□□ 0.1
CDC42EP1-201ENST00000249014 APELAP0DMC3 54 aa15.68■□□□□ 0.1
CDC42EP1-201ENST00000249014 C10orf113Q5VZT2 155 aa15.68■□□□□ 0.1
CDC42EP1-201ENST00000249014 MMD2Q8IY49 270 aa15.68■□□□□ 0.1
CDC42EP1-201ENST00000249014 TMEM256Q8N2U0 113 aa15.68■□□□□ 0.1
CDC42EP1-201ENST00000249014 GBGT1Q8N5D6 347 aa15.68■□□□□ 0.1
CDC42EP1-201ENST00000249014 RNF2Q99496 336 aa15.68■□□□□ 0.1
CDC42EP1-201ENST00000249014 TRAV9-1A0A075B6T8 112 aa15.68■□□□□ 0.1
CDC42EP1-201ENST00000249014 CRYGBP07316 175 aa15.68■□□□□ 0.1
CDC42EP1-201ENST00000249014 RPEL1Q2QD12 228 aa15.68■□□□□ 0.1
CDC42EP1-201ENST00000249014 TEX45Q8NA69 505 aa15.68■□□□□ 0.1
CDC42EP1-201ENST00000249014 TNFRSF14Q92956 283 aa15.68■□□□□ 0.1
CDC42EP1-201ENST00000249014 IGF2BP2-AS1Q96M15 143 aa15.68■□□□□ 0.1
CDC42EP1-201ENST00000249014 C22orf46C9J442 243 aa15.67■□□□□ 0.1
CDC42EP1-201ENST00000249014 NUPR1O60356 82 aa15.67■□□□□ 0.1
CDC42EP1-201ENST00000249014 TNXAQ16473 311 aa15.67■□□□□ 0.1
CDC42EP1-201ENST00000249014 TMEM18Q96B42 140 aa15.67■□□□□ 0.1
CDC42EP1-201ENST00000249014 COL25A1Q9BXS0 654 aaPredicted RBP15.67■□□□□ 0.1
CDC42EP1-201ENST00000249014 IGHV1-3A0A0C4DH29 117 aa15.66■□□□□ 0.1
CDC42EP1-201ENST00000249014 BUB1B-PAK6H3BSN5 160 aa15.66■□□□□ 0.1
CDC42EP1-201ENST00000249014 CA7P43166 264 aa15.66■□□□□ 0.1
CDC42EP1-201ENST00000249014 OR1L4Q8NGR5 311 aa15.66■□□□□ 0.1
CDC42EP1-201ENST00000249014 GCGP01275 180 aa15.66■□□□□ 0.1
CDC42EP1-201ENST00000249014 PRRX1P54821 245 aa15.66■□□□□ 0.1
CDC42EP1-201ENST00000249014 CDSNQ15517 529 aa15.66■□□□□ 0.1
CDC42EP1-201ENST00000249014 TIGITQ495A1 244 aa15.66■□□□□ 0.1
CDC42EP1-201ENST00000249014 PVRIGQ6DKI7 326 aa15.66■□□□□ 0.1
CDC42EP1-201ENST00000249014 OR8I2Q8N0Y5 310 aa15.66■□□□□ 0.1
CDC42EP1-201ENST00000249014 MISP3Q96FF7 219 aa15.66■□□□□ 0.1
CDC42EP1-201ENST00000249014 LINC00479Q96M42 142 aa15.66■□□□□ 0.1
CDC42EP1-201ENST00000249014 PAXXQ9BUH6 204 aa15.66■□□□□ 0.1
CDC42EP1-201ENST00000249014 PRO1933Q9H354 126 aa15.66■□□□□ 0.1
CDC42EP1-201ENST00000249014 INSIG2Q9Y5U4 225 aa15.66■□□□□ 0.1
CDC42EP1-201ENST00000249014 GRIFINA4D1Z8 144 aa15.65■□□□□ 0.1
CDC42EP1-201ENST00000249014 MOSP00540 346 aa15.65■□□□□ 0.1
CDC42EP1-201ENST00000249014 CRYGCP07315 174 aa15.65■□□□□ 0.1
CDC42EP1-201ENST00000249014 RPL27AP46776 148 aaKnown RBP15.65■□□□□ 0.1
CDC42EP1-201ENST00000249014 FXYD3Q14802 87 aa15.65■□□□□ 0.1
CDC42EP1-201ENST00000249014 FBXL19-AS1Q494R0 122 aa15.65■□□□□ 0.1
CDC42EP1-201ENST00000249014 OR1L6Q8NGR2 347 aa15.65■□□□□ 0.1
CDC42EP1-201ENST00000249014 CLEC7AQ9BXN2 247 aa15.65■□□□□ 0.1
CDC42EP1-201ENST00000249014 SIGLEC9Q9Y336 463 aa15.65■□□□□ 0.1
CDC42EP1-201ENST00000249014 PPIAL4CA0A0B4J2A2 164 aa15.65■□□□□ 0.1
CDC42EP1-201ENST00000249014 PPIAL4GP0DN37 164 aa15.65■□□□□ 0.1
CDC42EP1-201ENST00000249014 COX7A1P24310 79 aa15.65■□□□□ 0.1
CDC42EP1-201ENST00000249014 CASP6P55212 293 aa15.65■□□□□ 0.1
CDC42EP1-201ENST00000249014 BPIFB3P59826 476 aa15.65■□□□□ 0.1
CDC42EP1-201ENST00000249014 SELENOTP62341 195 aa15.65■□□□□ 0.1
CDC42EP1-201ENST00000249014 MRPL18Q9H0U6 180 aaKnown RBP15.65■□□□□ 0.1
CDC42EP1-201ENST00000249014 ANKHD1Q8IWZ3 2542 aaKnown RBP15.64■□□□□ 0.09
CDC42EP1-201ENST00000249014 SNRPCP09234 159 aaKnown RBP15.64■□□□□ 0.09
CDC42EP1-201ENST00000249014 PKIAP61925 76 aa15.64■□□□□ 0.09
CDC42EP1-201ENST00000249014 ZNF672Q499Z4 452 aaPredicted RBP15.64■□□□□ 0.09
CDC42EP1-201ENST00000249014 LINC00305Q7Z4B0 112 aa15.64■□□□□ 0.09
CDC42EP1-201ENST00000249014 FXYD5Q96DB9 178 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms