RNA–Protein interactions for RNA: ENST00000248437.8

TUBA4A-201, Transcript of tubulin alpha 4a, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA4A, Length 2,162 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA4A-201ENST00000248437 SRSF1Q07955 248 aaKnown RBP eCLIP14.85□□□□□ -0.03
TUBA4A-201ENST00000248437 UTP20O75691 2785 aaKnown RBP14.85□□□□□ -0.03
TUBA4A-201ENST00000248437 TRBV24-1A0A075B6N3 115 aa14.84□□□□□ -0.03
TUBA4A-201ENST00000248437 IGKV1D-37A0A075B6S9 117 aa14.84□□□□□ -0.03
TUBA4A-201ENST00000248437 TGIF2-C20orf24A0A0A6YYL0 155 aa14.84□□□□□ -0.03
TUBA4A-201ENST00000248437 TEX22C9J3V5 150 aa14.84□□□□□ -0.03
TUBA4A-201ENST00000248437 NDUFS7O75251 213 aa14.84□□□□□ -0.03
TUBA4A-201ENST00000248437 C16orf82Q7Z2V1 217 aa14.84□□□□□ -0.03
TUBA4A-201ENST00000248437 TMEM37Q8WXS4 190 aa14.84□□□□□ -0.03
TUBA4A-201ENST00000248437 SLC25A33Q9BSK2 321 aa14.84□□□□□ -0.03
TUBA4A-201ENST00000248437 FAM208BQ5VWN6 2430 aa14.84□□□□□ -0.03
TUBA4A-201ENST00000248437 IGHV2-5P01817 119 aa14.84□□□□□ -0.03
TUBA4A-201ENST00000248437 S100A6P06703 90 aa14.84□□□□□ -0.03
TUBA4A-201ENST00000248437 KIAA0141Q14154 515 aaPredicted RBP14.84□□□□□ -0.03
TUBA4A-201ENST00000248437 SRSF12Q8WXF0 261 aaKnown RBP14.84□□□□□ -0.03
TUBA4A-201ENST00000248437 C11orf52Q96A22 123 aa14.84□□□□□ -0.03
TUBA4A-201ENST00000248437 PFDN5Q99471 154 aa14.84□□□□□ -0.03
TUBA4A-201ENST00000248437 SSX3Q99909 188 aa14.84□□□□□ -0.03
TUBA4A-201ENST00000248437 DNAJC4Q9NNZ3 241 aa14.84□□□□□ -0.03
TUBA4A-201ENST00000248437 F11RQ9Y624 299 aaKnown RBP14.84□□□□□ -0.03
TUBA4A-201ENST00000248437 C5orf52A6NGY3 159 aa14.83□□□□□ -0.04
TUBA4A-201ENST00000248437 C8orf88P0DMB2 117 aa14.83□□□□□ -0.04
TUBA4A-201ENST00000248437 MFAP2P55001 183 aa14.83□□□□□ -0.04
TUBA4A-201ENST00000248437 SSBP2P81877 361 aaPredicted RBP14.83□□□□□ -0.04
TUBA4A-201ENST00000248437 KLRD1Q13241 179 aa14.83□□□□□ -0.04
TUBA4A-201ENST00000248437 LINC01551Q86U37 167 aa14.83□□□□□ -0.04
TUBA4A-201ENST00000248437 OR1L4Q8NGR5 311 aa14.83□□□□□ -0.04
TUBA4A-201ENST00000248437 C22orf15Q8WYQ4 148 aa14.83□□□□□ -0.04
TUBA4A-201ENST00000248437 UHRF2Q96PU4 802 aa14.83□□□□□ -0.04
TUBA4A-201ENST00000248437 H7BYZ3 331 aa14.83□□□□□ -0.04
TUBA4A-201ENST00000248437 TGOLN2O43493 480 aa14.83□□□□□ -0.04
TUBA4A-201ENST00000248437 PLGLAQ15195 96 aa14.83□□□□□ -0.04
TUBA4A-201ENST00000248437 NPBQ8NG41 125 aa14.83□□□□□ -0.04
TUBA4A-201ENST00000248437 ZNF503Q96F45 646 aa14.83□□□□□ -0.04
TUBA4A-201ENST00000248437 MISP3Q96FF7 219 aa14.83□□□□□ -0.04
TUBA4A-201ENST00000248437 FAM210BQ96KR6 192 aa14.83□□□□□ -0.04
TUBA4A-201ENST00000248437 MRPL36Q9P0J6 103 aaKnown RBP14.83□□□□□ -0.04
TUBA4A-201ENST00000248437 HILPDAQ9Y5L2 63 aa14.83□□□□□ -0.04
TUBA4A-201ENST00000248437 SCO2A0A1W2PP80 73 aa14.82□□□□□ -0.04
TUBA4A-201ENST00000248437 OOSP1A8MZH6 123 aa14.82□□□□□ -0.04
TUBA4A-201ENST00000248437 NBR2O15453 112 aa14.82□□□□□ -0.04
TUBA4A-201ENST00000248437 MOSP00540 346 aa14.82□□□□□ -0.04
TUBA4A-201ENST00000248437 CD99P14209 185 aa14.82□□□□□ -0.04
TUBA4A-201ENST00000248437 ZFP36P26651 326 aaKnown RBP14.82□□□□□ -0.04
TUBA4A-201ENST00000248437 BPIFB3P59826 476 aa14.82□□□□□ -0.04
TUBA4A-201ENST00000248437 MMDQ15546 238 aa14.82□□□□□ -0.04
TUBA4A-201ENST00000248437 CCDC144NLQ6NUI1 221 aa14.82□□□□□ -0.04
TUBA4A-201ENST00000248437 VMO1Q7Z5L0 202 aa14.82□□□□□ -0.04
TUBA4A-201ENST00000248437 TMEM116Q8NCL8 245 aa14.82□□□□□ -0.04
TUBA4A-201ENST00000248437 DERL1Q9BUN8 251 aa14.82□□□□□ -0.04
TUBA4A-201ENST00000248437 LRRK2Q5S007 2527 aa14.82□□□□□ -0.04
TUBA4A-201ENST00000248437 NDUFA3O95167 84 aa14.81□□□□□ -0.04
TUBA4A-201ENST00000248437 GOSR1O95249 250 aa14.81□□□□□ -0.04
TUBA4A-201ENST00000248437 MINOS1Q5TGZ0 78 aa14.81□□□□□ -0.04
TUBA4A-201ENST00000248437 LHFPL4Q7Z7J7 247 aa14.81□□□□□ -0.04
TUBA4A-201ENST00000248437 MINOS1-NBL1R4GNA1 71 aa14.81□□□□□ -0.04
TUBA4A-201ENST00000248437 OVOL3O00110 214 aa14.81□□□□□ -0.04
TUBA4A-201ENST00000248437 OR7C2O60412 319 aa14.81□□□□□ -0.04
TUBA4A-201ENST00000248437 PFN1P07737 140 aaKnown RBP14.81□□□□□ -0.04
TUBA4A-201ENST00000248437 SNRPEP62304 92 aaKnown RBP14.81□□□□□ -0.04
TUBA4A-201ENST00000248437 TRGV9Q99603 122 aa14.81□□□□□ -0.04
TUBA4A-201ENST00000248437 FCN1O00602 326 aa14.8□□□□□ -0.04
TUBA4A-201ENST00000248437 COX7A2P2O60397 106 aa14.8□□□□□ -0.04
TUBA4A-201ENST00000248437 ZNF90Q03938 601 aa14.8□□□□□ -0.04
TUBA4A-201ENST00000248437 FAM167A-AS1Q96KT0 104 aa14.8□□□□□ -0.04
TUBA4A-201ENST00000248437 OR5B12Q96R08 314 aa14.8□□□□□ -0.04
TUBA4A-201ENST00000248437 PYGO2Q9BRQ0 406 aa14.8□□□□□ -0.04
TUBA4A-201ENST00000248437 SIRPDQ9H106 197 aa14.8□□□□□ -0.04
TUBA4A-201ENST00000248437 UBE2CO00762 179 aa14.8□□□□□ -0.04
TUBA4A-201ENST00000248437 IGHV3-48P01763 117 aa14.8□□□□□ -0.04
TUBA4A-201ENST00000248437 HOXB4P17483 251 aaPredicted RBP14.8□□□□□ -0.04
TUBA4A-201ENST00000248437 S100PP25815 95 aa14.8□□□□□ -0.04
TUBA4A-201ENST00000248437 C10orf113Q5VZT2 155 aa14.8□□□□□ -0.04
TUBA4A-201ENST00000248437 TNFRSF19Q9NS68 423 aa14.8□□□□□ -0.04
TUBA4A-201ENST00000248437 CRYBG3Q68DQ2 2970 aa14.8□□□□□ -0.04
TUBA4A-201ENST00000248437 A0A1W2PRE2 83 aa14.79□□□□□ -0.04
TUBA4A-201ENST00000248437 GALR1P47211 349 aa14.79□□□□□ -0.04
TUBA4A-201ENST00000248437 OR4X1Q8NH49 305 aa14.79□□□□□ -0.04
TUBA4A-201ENST00000248437 EAF1Q96JC9 268 aaPredicted RBP14.79□□□□□ -0.04
TUBA4A-201ENST00000248437 SLC25A2Q9BXI2 301 aa14.79□□□□□ -0.04
TUBA4A-201ENST00000248437 TRBV20OR9-2A0A075B6H5 130 aa14.78□□□□□ -0.04
TUBA4A-201ENST00000248437 ELOA3CA0A087WX78 387 aaPredicted RBP14.78□□□□□ -0.04
TUBA4A-201ENST00000248437 IGHV2-70DA0A0C4DH43 119 aa14.78□□□□□ -0.04
TUBA4A-201ENST00000248437 PPP1R2P9O14990 202 aa14.78□□□□□ -0.04
TUBA4A-201ENST00000248437 APELAP0DMC3 54 aa14.78□□□□□ -0.04
TUBA4A-201ENST00000248437 OR2T10Q8NGZ9 312 aa14.78□□□□□ -0.04
TUBA4A-201ENST00000248437 C9JCJ5 164 aa14.78□□□□□ -0.04
TUBA4A-201ENST00000248437 LY96Q9Y6Y9 160 aa14.78□□□□□ -0.04
TUBA4A-201ENST00000248437 AP4M1O00189 453 aa14.77□□□□□ -0.04
TUBA4A-201ENST00000248437 CNIH1O95406 144 aa14.77□□□□□ -0.04
TUBA4A-201ENST00000248437 SRP14P37108 136 aaKnown RBP14.77□□□□□ -0.04
TUBA4A-201ENST00000248437 SSX2Q16385 188 aa14.77□□□□□ -0.04
TUBA4A-201ENST00000248437 PATE2Q6UY27 113 aa14.77□□□□□ -0.04
TUBA4A-201ENST00000248437 C19orf35Q6ZS72 473 aa14.77□□□□□ -0.04
TUBA4A-201ENST00000248437 DMRT1Q9Y5R6 373 aa14.77□□□□□ -0.04
TUBA4A-201ENST00000248437 AKR1D1P51857 326 aa14.77□□□□□ -0.05
TUBA4A-201ENST00000248437 LGALS4P56470 323 aa14.77□□□□□ -0.05
TUBA4A-201ENST00000248437 LMO4P61968 165 aa14.77□□□□□ -0.05
TUBA4A-201ENST00000248437 LCN2P80188 198 aa14.77□□□□□ -0.05
TUBA4A-201ENST00000248437 MORN5Q5VZ52 161 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms