RNA–Protein interactions for RNA: ENST00000248054.9

SIN3B-201, Transcript of SIN3 transcription regulator family member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIN3B, Length 5,037 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-201ENST00000248054 Q6AWC8 147 aa13.08□□□□□ -0.32
SIN3B-201ENST00000248054 RNF144BQ7Z419 303 aa13.08□□□□□ -0.32
SIN3B-201ENST00000248054 IGFL2Q6UWQ7 119 aa13.07□□□□□ -0.32
SIN3B-201ENST00000248054 NUDT10Q8NFP7 164 aa13.07□□□□□ -0.32
SIN3B-201ENST00000248054 TMEM8BA6NDV4 472 aa13.07□□□□□ -0.32
SIN3B-201ENST00000248054 NUDT11Q96G61 164 aa13.07□□□□□ -0.32
SIN3B-201ENST00000248054 PGLYRP4Q96LB8 373 aa13.07□□□□□ -0.32
SIN3B-201ENST00000248054 POLR3KQ9Y2Y1 108 aaPredicted RBP13.07□□□□□ -0.32
SIN3B-201ENST00000248054 CBLN1P23435 193 aa13.07□□□□□ -0.32
SIN3B-201ENST00000248054 PRSS33Q8NF86 280 aa13.07□□□□□ -0.32
SIN3B-201ENST00000248054 TMEM178BH3BS89 294 aa13.07□□□□□ -0.32
SIN3B-201ENST00000248054 MLNRO43193 412 aa13.07□□□□□ -0.32
SIN3B-201ENST00000248054 IMMP2LQ96T52 175 aa13.07□□□□□ -0.32
SIN3B-201ENST00000248054 CD177Q8N6Q3 437 aa13.06□□□□□ -0.32
SIN3B-201ENST00000248054 NCOR1P1Q9H4R4 102 aa13.06□□□□□ -0.32
SIN3B-201ENST00000248054 ITGB1BP1O14713 200 aa13.06□□□□□ -0.32
SIN3B-201ENST00000248054 CD33P20138 364 aa13.06□□□□□ -0.32
SIN3B-201ENST00000248054 RPL23P62829 140 aaKnown RBP13.06□□□□□ -0.32
SIN3B-201ENST00000248054 TEX45Q8NA69 505 aa13.06□□□□□ -0.32
SIN3B-201ENST00000248054 NPIPB3Q92617 1050 aa13.06□□□□□ -0.32
SIN3B-201ENST00000248054 IGHV3-21A0A0B4J1V1 117 aa13.06□□□□□ -0.32
SIN3B-201ENST00000248054 MOSP00540 346 aa13.06□□□□□ -0.32
SIN3B-201ENST00000248054 CCL3L1P16619 93 aa13.06□□□□□ -0.32
SIN3B-201ENST00000248054 MPDZO75970 2070 aa13.06□□□□□ -0.32
SIN3B-201ENST00000248054 DPRXA6NFQ7 191 aa13.06□□□□□ -0.32
SIN3B-201ENST00000248054 LILRA1O75019 489 aa13.06□□□□□ -0.32
SIN3B-201ENST00000248054 MBD3L1Q8WWY6 194 aa13.06□□□□□ -0.32
SIN3B-201ENST00000248054 NMSQ5H8A3 153 aa13.05□□□□□ -0.32
SIN3B-201ENST00000248054 SRSF12Q8WXF0 261 aaKnown RBP13.05□□□□□ -0.32
SIN3B-201ENST00000248054 FAM168AQ92567 244 aa13.05□□□□□ -0.32
SIN3B-201ENST00000248054 SPRY4Q9C004 299 aa13.05□□□□□ -0.32
SIN3B-201ENST00000248054 TPRP12270 2363 aaKnown RBP13.05□□□□□ -0.32
SIN3B-201ENST00000248054 LOC389332A0A1B0GUA5 103 aa13.05□□□□□ -0.32
SIN3B-201ENST00000248054 C10orf142B7Z368 130 aa13.05□□□□□ -0.32
SIN3B-201ENST00000248054 SAA1P0DJI8 122 aaPredicted RBP13.05□□□□□ -0.32
SIN3B-201ENST00000248054 LMO1P25800 156 aa13.05□□□□□ -0.32
SIN3B-201ENST00000248054 TMEM144Q7Z5S9 345 aa13.05□□□□□ -0.32
SIN3B-201ENST00000248054 ZNF257Q9Y2Q1 563 aa13.05□□□□□ -0.32
SIN3B-201ENST00000248054 TRAV1-1A0A0B4J248 108 aa13.05□□□□□ -0.32
SIN3B-201ENST00000248054 SERF1AO75920 110 aa13.05□□□□□ -0.32
SIN3B-201ENST00000248054 NIT1Q86X76 327 aa13.05□□□□□ -0.32
SIN3B-201ENST00000248054 C16orf92Q96LL3 132 aa13.05□□□□□ -0.32
SIN3B-201ENST00000248054 EGR1P18146 543 aa13.04□□□□□ -0.32
SIN3B-201ENST00000248054 ANOS1P23352 680 aa13.04□□□□□ -0.32
SIN3B-201ENST00000248054 RSPO1Q2MKA7 263 aaPredicted RBP13.04□□□□□ -0.32
SIN3B-201ENST00000248054 TMEM256Q8N2U0 113 aa13.04□□□□□ -0.32
SIN3B-201ENST00000248054 FMC1Q96HJ9 113 aa13.04□□□□□ -0.32
SIN3B-201ENST00000248054 RIF1Q5UIP0 2472 aaKnown RBP13.04□□□□□ -0.32
SIN3B-201ENST00000248054 OR4C46A6NHA9 309 aa13.04□□□□□ -0.32
SIN3B-201ENST00000248054 M0R3E3 92 aa13.04□□□□□ -0.32
SIN3B-201ENST00000248054 KIAA1644Q3SXP7 199 aa13.04□□□□□ -0.32
SIN3B-201ENST00000248054 MBNL3Q9NUK0 354 aaKnown RBP13.04□□□□□ -0.32
SIN3B-201ENST00000248054 FCGR2BP31994 310 aaPredicted RBP13.04□□□□□ -0.32
SIN3B-201ENST00000248054 GATA4P43694 442 aa13.04□□□□□ -0.32
SIN3B-201ENST00000248054 PRCDQ00LT1 54 aa13.04□□□□□ -0.32
SIN3B-201ENST00000248054 MRPL52Q86TS9 123 aaKnown RBP13.04□□□□□ -0.32
SIN3B-201ENST00000248054 IGLV1-44P01699 117 aa13.04□□□□□ -0.32
SIN3B-201ENST00000248054 COX6CP09669 75 aa13.04□□□□□ -0.32
SIN3B-201ENST00000248054 RIPPLY3P57055 190 aa13.04□□□□□ -0.32
SIN3B-201ENST00000248054 LOXL3P58215 753 aa13.04□□□□□ -0.32
SIN3B-201ENST00000248054 TCF23Q7RTU1 214 aa13.04□□□□□ -0.32
SIN3B-201ENST00000248054 COPS9Q8WXC6 57 aa13.04□□□□□ -0.32
SIN3B-201ENST00000248054 EEF1AKMT3Q96AZ1 226 aa13.04□□□□□ -0.32
SIN3B-201ENST00000248054 TBL2Q9Y4P3 447 aaKnown RBP13.04□□□□□ -0.32
SIN3B-201ENST00000248054 PTPRSQ13332 1948 aa13.04□□□□□ -0.32
SIN3B-201ENST00000248054 RAMP3O60896 148 aa13.03□□□□□ -0.32
SIN3B-201ENST00000248054 CEACAM4O75871 244 aa13.03□□□□□ -0.32
SIN3B-201ENST00000248054 EBLN2Q6P2I7 272 aa13.03□□□□□ -0.32
SIN3B-201ENST00000248054 PLAUP00749 431 aa13.03□□□□□ -0.32
SIN3B-201ENST00000248054 FAM71F2Q6NXP2 309 aa13.03□□□□□ -0.32
SIN3B-201ENST00000248054 NPIPB6E9PJ23 425 aa13.03□□□□□ -0.32
SIN3B-201ENST00000248054 ZNF672Q499Z4 452 aaPredicted RBP13.03□□□□□ -0.32
SIN3B-201ENST00000248054 LINC00305Q7Z4B0 112 aa13.03□□□□□ -0.32
SIN3B-201ENST00000248054 KCNS1Q96KK3 526 aa13.03□□□□□ -0.32
SIN3B-201ENST00000248054 RNF5Q99942 180 aa13.03□□□□□ -0.32
SIN3B-201ENST00000248054 PHF3Q92576 2039 aaKnown RBP13.03□□□□□ -0.32
SIN3B-201ENST00000248054 TMEM131Q92545 1883 aa13.02□□□□□ -0.32
SIN3B-201ENST00000248054 PEX7O00628 323 aa13.02□□□□□ -0.32
SIN3B-201ENST00000248054 ATP5G2Q06055 141 aa13.02□□□□□ -0.32
SIN3B-201ENST00000248054 UBE2V1Q13404 147 aa13.02□□□□□ -0.32
SIN3B-201ENST00000248054 Q8TCH9 128 aa13.02□□□□□ -0.32
SIN3B-201ENST00000248054 COQ2Q96H96 371 aa13.02□□□□□ -0.32
SIN3B-201ENST00000248054 FBXL15Q9H469 300 aa13.02□□□□□ -0.32
SIN3B-201ENST00000248054 GVINP1Q7Z2Y8 2422 aa13.02□□□□□ -0.32
SIN3B-201ENST00000248054 IZUMO1RA6ND01 250 aa13.02□□□□□ -0.32
SIN3B-201ENST00000248054 PPP1R17O96001 155 aa13.02□□□□□ -0.32
SIN3B-201ENST00000248054 C1QTNF9BB2RNN3 333 aa13.02□□□□□ -0.33
SIN3B-201ENST00000248054 CD55P08174 381 aa13.02□□□□□ -0.33
SIN3B-201ENST00000248054 ADMP35318 185 aa13.02□□□□□ -0.33
SIN3B-201ENST00000248054 TFF3Q07654 80 aa13.02□□□□□ -0.33
SIN3B-201ENST00000248054 ZNF841Q6ZN19 808 aa13.02□□□□□ -0.33
SIN3B-201ENST00000248054 Q6ZSR3 168 aa13.02□□□□□ -0.33
SIN3B-201ENST00000248054 OR1N2Q8NGR9 330 aa13.02□□□□□ -0.33
SIN3B-201ENST00000248054 PEF1Q9UBV8 284 aaKnown RBP13.02□□□□□ -0.33
SIN3B-201ENST00000248054 FOXA2Q9Y261 457 aaPredicted RBP13.02□□□□□ -0.33
SIN3B-201ENST00000248054 OOSP1A8MZH6 123 aa13.02□□□□□ -0.33
SIN3B-201ENST00000248054 RRHO14718 337 aa13.02□□□□□ -0.33
SIN3B-201ENST00000248054 NBEAP1P0C6P0 100 aa13.02□□□□□ -0.33
SIN3B-201ENST00000248054 ADIPOQQ15848 244 aa13.02□□□□□ -0.33
SIN3B-201ENST00000248054 GAFA1Q96PS6 74 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms