RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 NDUFS6O75380 124 aaKnown RBP11.21□□□□□ -0.61
SDF2-201ENST00000247020 MT-CO2P00403 227 aa11.21□□□□□ -0.61
SDF2-201ENST00000247020 LINC00869P0C866 280 aa11.21□□□□□ -0.61
SDF2-201ENST00000247020 HIST1H1BP16401 226 aaKnown RBP11.21□□□□□ -0.61
SDF2-201ENST00000247020 OR10J1P30954 320 aa11.21□□□□□ -0.61
SDF2-201ENST00000247020 TAGLN2P37802 199 aaKnown RBP11.21□□□□□ -0.61
SDF2-201ENST00000247020 CRIP2P52943 208 aaPredicted RBP11.21□□□□□ -0.61
SDF2-201ENST00000247020 MLANAQ16655 118 aa11.21□□□□□ -0.61
SDF2-201ENST00000247020 CYP2G1PQ6ZSU1 146 aa11.21□□□□□ -0.61
SDF2-201ENST00000247020 FAM110DQ8TAY7 271 aaPredicted RBP11.21□□□□□ -0.61
SDF2-201ENST00000247020 ACY3Q96HD9 319 aa11.21□□□□□ -0.61
SDF2-201ENST00000247020 SCRT1Q9BWW7 348 aa11.21□□□□□ -0.61
SDF2-201ENST00000247020 TREM1Q9NP99 234 aa11.21□□□□□ -0.61
SDF2-201ENST00000247020 THYN1Q9P016 225 aa11.21□□□□□ -0.61
SDF2-201ENST00000247020 DMRT1Q9Y5R6 373 aa11.21□□□□□ -0.61
SDF2-201ENST00000247020 IGLV11-55A0A075B6I3 123 aa11.2□□□□□ -0.62
SDF2-201ENST00000247020 A0A1W2PPV4 95 aa11.2□□□□□ -0.62
SDF2-201ENST00000247020 H3BUX3 64 aa11.2□□□□□ -0.62
SDF2-201ENST00000247020 IFNA1P01562 189 aa11.2□□□□□ -0.62
SDF2-201ENST00000247020 APELAP0DMC3 54 aa11.2□□□□□ -0.62
SDF2-201ENST00000247020 EGR2P11161 476 aaPredicted RBP11.2□□□□□ -0.62
SDF2-201ENST00000247020 PPT1P50897 306 aa11.2□□□□□ -0.62
SDF2-201ENST00000247020 RND2P52198 227 aa11.2□□□□□ -0.62
SDF2-201ENST00000247020 RHOBP62745 196 aa11.2□□□□□ -0.62
SDF2-201ENST00000247020 FAM122CQ6P4D5 195 aa11.2□□□□□ -0.62
SDF2-201ENST00000247020 SSX7Q7RTT5 188 aa11.2□□□□□ -0.62
SDF2-201ENST00000247020 OR4X1Q8NH49 305 aa11.2□□□□□ -0.62
SDF2-201ENST00000247020 NPIPB3Q92617 1050 aa11.2□□□□□ -0.62
SDF2-201ENST00000247020 RAB24Q969Q5 203 aa11.2□□□□□ -0.62
SDF2-201ENST00000247020 ZNF48Q96MX3 618 aaPredicted RBP11.2□□□□□ -0.62
SDF2-201ENST00000247020 LINC00052Q96N35 136 aa11.2□□□□□ -0.62
SDF2-201ENST00000247020 RNF2Q99496 336 aa11.2□□□□□ -0.62
SDF2-201ENST00000247020 FAM103A1Q9BTL3 118 aaKnown RBP11.2□□□□□ -0.62
SDF2-201ENST00000247020 ABCA12Q86UK0 2595 aa11.2□□□□□ -0.62
SDF2-201ENST00000247020 IGKV1D-37A0A075B6S9 117 aa11.2□□□□□ -0.62
SDF2-201ENST00000247020 RBFOX3A6NFN3 312 aa11.2□□□□□ -0.62
SDF2-201ENST00000247020 AKIRIN2Q53H80 203 aa11.2□□□□□ -0.62
SDF2-201ENST00000247020 KHDC3LQ587J8 217 aa11.2□□□□□ -0.62
SDF2-201ENST00000247020 ZNF506Q5JVG8 444 aa11.2□□□□□ -0.62
SDF2-201ENST00000247020 LCN15Q6UWW0 184 aa11.2□□□□□ -0.62
SDF2-201ENST00000247020 WFDC11Q8NEX6 87 aa11.2□□□□□ -0.62
SDF2-201ENST00000247020 OR5R1Q8NH85 324 aa11.2□□□□□ -0.62
SDF2-201ENST00000247020 HSPB9Q9BQS6 159 aa11.2□□□□□ -0.62
SDF2-201ENST00000247020 SEC11CQ9BY50 192 aa11.2□□□□□ -0.62
SDF2-201ENST00000247020 EIF5A2Q9GZV4 153 aaKnown RBP11.2□□□□□ -0.62
SDF2-201ENST00000247020 SLC25A22Q9H936 323 aa11.2□□□□□ -0.62
SDF2-201ENST00000247020 POLQO75417 2590 aa11.2□□□□□ -0.62
SDF2-201ENST00000247020 ZFP92A6NM28 416 aa11.19□□□□□ -0.62
SDF2-201ENST00000247020 K7EIM0 57 aa11.19□□□□□ -0.62
SDF2-201ENST00000247020 PSMB3P49720 205 aa11.19□□□□□ -0.62
SDF2-201ENST00000247020 CCL20P78556 96 aa11.19□□□□□ -0.62
SDF2-201ENST00000247020 SRSF3P84103 164 aaKnown RBP11.19□□□□□ -0.62
SDF2-201ENST00000247020 C10orf91Q5T1B1 145 aa11.19□□□□□ -0.62
SDF2-201ENST00000247020 NARS2Q96I59 477 aaKnown RBP11.19□□□□□ -0.62
SDF2-201ENST00000247020 FANCD2OSQ96PS1 177 aa11.19□□□□□ -0.62
SDF2-201ENST00000247020 PFDN5Q99471 154 aa11.19□□□□□ -0.62
SDF2-201ENST00000247020 MRPL32Q9BYC8 188 aaKnown RBP11.19□□□□□ -0.62
SDF2-201ENST00000247020 ATP6V0E1O15342 81 aa11.18□□□□□ -0.62
SDF2-201ENST00000247020 HSPB1P04792 205 aaKnown RBP11.18□□□□□ -0.62
SDF2-201ENST00000247020 FABP1P07148 127 aa11.18□□□□□ -0.62
SDF2-201ENST00000247020 OR5G3P0C626 314 aa11.18□□□□□ -0.62
SDF2-201ENST00000247020 STAG3L2P0CL84 134 aa11.18□□□□□ -0.62
SDF2-201ENST00000247020 STAG3L3P0CL85 134 aa11.18□□□□□ -0.62
SDF2-201ENST00000247020 RBMS3Q6XE24 437 aaKnown RBP11.18□□□□□ -0.62
SDF2-201ENST00000247020 C19orf35Q6ZS72 473 aa11.18□□□□□ -0.62
SDF2-201ENST00000247020 TMEM219Q86XT9 240 aa11.18□□□□□ -0.62
SDF2-201ENST00000247020 OR1L4Q8NGR5 311 aa11.18□□□□□ -0.62
SDF2-201ENST00000247020 GATAD1Q8WUU5 269 aa11.18□□□□□ -0.62
SDF2-201ENST00000247020 PRDM13Q9H4Q3 707 aa11.18□□□□□ -0.62
SDF2-201ENST00000247020 MANBALQ9NQG1 85 aa11.18□□□□□ -0.62
SDF2-201ENST00000247020 TNFRSF19Q9NS68 423 aa11.18□□□□□ -0.62
SDF2-201ENST00000247020 MRPL36Q9P0J6 103 aaKnown RBP11.18□□□□□ -0.62
SDF2-201ENST00000247020 TRAV30A0A087WSZ9 112 aa11.17□□□□□ -0.62
SDF2-201ENST00000247020 LOC102723971A0A1B0GUV8 181 aa11.17□□□□□ -0.62
SDF2-201ENST00000247020 CLN5O75503 358 aa11.17□□□□□ -0.62
SDF2-201ENST00000247020 AMY1AP04745 511 aa11.17□□□□□ -0.62
SDF2-201ENST00000247020 BCL2P10415 239 aa11.17□□□□□ -0.62
SDF2-201ENST00000247020 FCGR2BP31994 310 aaPredicted RBP11.17□□□□□ -0.62
SDF2-201ENST00000247020 DEFB112Q30KQ8 113 aa11.17□□□□□ -0.62
SDF2-201ENST00000247020 GCSAMLQ5JQS6 135 aa11.17□□□□□ -0.62
SDF2-201ENST00000247020 UNQ5815/PRO19632Q6UWF5 114 aa11.17□□□□□ -0.62
SDF2-201ENST00000247020 ZNF580Q9UK33 172 aa11.17□□□□□ -0.62
SDF2-201ENST00000247020 FUT9Q9Y231 359 aa11.17□□□□□ -0.62
SDF2-201ENST00000247020 CARHSP1Q9Y2V2 147 aaKnown RBP11.17□□□□□ -0.62
SDF2-201ENST00000247020 CSMD2Q7Z408 3487 aa11.17□□□□□ -0.62
SDF2-201ENST00000247020 A0A1B0GV50 99 aa11.16□□□□□ -0.62
SDF2-201ENST00000247020 PSMB11A5LHX3 300 aa11.16□□□□□ -0.62
SDF2-201ENST00000247020 SCGB2A1O75556 95 aa11.16□□□□□ -0.62
SDF2-201ENST00000247020 BRI3O95415 125 aa11.16□□□□□ -0.62
SDF2-201ENST00000247020 CXorf1O96002 111 aa11.16□□□□□ -0.62
SDF2-201ENST00000247020 IGHG2P01859 326 aa11.16□□□□□ -0.62
SDF2-201ENST00000247020 IGF1P05019 195 aa11.16□□□□□ -0.62
SDF2-201ENST00000247020 IER3P46695 156 aa11.16□□□□□ -0.62
SDF2-201ENST00000247020 NPBWR1P48145 328 aa11.16□□□□□ -0.62
SDF2-201ENST00000247020 FGF8P55075 233 aaPredicted RBP11.16□□□□□ -0.62
SDF2-201ENST00000247020 PLP1P60201 277 aa11.16□□□□□ -0.62
SDF2-201ENST00000247020 SLC35E3Q7Z769 313 aa11.16□□□□□ -0.62
SDF2-201ENST00000247020 CCDC28AQ8IWP9 274 aa11.16□□□□□ -0.62
SDF2-201ENST00000247020 TXN2Q99757 166 aa11.16□□□□□ -0.62
SDF2-201ENST00000247020 SLC35B3Q9H1N7 401 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 121.4 ms