RNA–Protein interactions for RNA: ENST00000245817.4

TNFSF9-201, Transcript of TNF superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF9, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9-201ENST00000245817 A0A1W2PPV4 95 aa14.79□□□□□ -0.04
TNFSF9-201ENST00000245817 ZFP92A6NM28 416 aa14.79□□□□□ -0.04
TNFSF9-201ENST00000245817 FSHBP01225 129 aa14.79□□□□□ -0.04
TNFSF9-201ENST00000245817 IGHV3-48P01763 117 aa14.79□□□□□ -0.04
TNFSF9-201ENST00000245817 UNQ5815/PRO19632Q6UWF5 114 aa14.79□□□□□ -0.04
TNFSF9-201ENST00000245817 SPNS3Q6ZMD2 512 aa14.79□□□□□ -0.04
TNFSF9-201ENST00000245817 C9orf139Q6ZV77 190 aa14.79□□□□□ -0.04
TNFSF9-201ENST00000245817 STPG3Q8N7X2 389 aa14.79□□□□□ -0.04
TNFSF9-201ENST00000245817 RCC1LQ96I51 464 aaKnown RBP14.79□□□□□ -0.04
TNFSF9-201ENST00000245817 PBDC1Q9BVG4 233 aa14.79□□□□□ -0.04
TNFSF9-201ENST00000245817 MDFIC2A0A1B0GVS7 189 aa14.78□□□□□ -0.04
TNFSF9-201ENST00000245817 EGR2P11161 476 aaPredicted RBP14.78□□□□□ -0.04
TNFSF9-201ENST00000245817 C9orf152Q5JTZ5 239 aa14.78□□□□□ -0.04
TNFSF9-201ENST00000245817 ASPHD1Q5U4P2 390 aa14.78□□□□□ -0.04
TNFSF9-201ENST00000245817 FAM122CQ6P4D5 195 aa14.78□□□□□ -0.04
TNFSF9-201ENST00000245817 LCN15Q6UWW0 184 aa14.78□□□□□ -0.04
TNFSF9-201ENST00000245817 RPP25LQ8N5L8 163 aaKnown RBP14.78□□□□□ -0.04
TNFSF9-201ENST00000245817 OR5T1Q8NG75 326 aa14.78□□□□□ -0.04
TNFSF9-201ENST00000245817 SLC45A2Q9UMX9 530 aa14.78□□□□□ -0.04
TNFSF9-201ENST00000245817 OTOGQ6ZRI0 2925 aa14.78□□□□□ -0.04
TNFSF9-201ENST00000245817 IGHV3-21A0A0B4J1V1 117 aa14.77□□□□□ -0.04
TNFSF9-201ENST00000245817 CTXND1A0A1B0GTU2 59 aa14.77□□□□□ -0.04
TNFSF9-201ENST00000245817 ATP6V0E1O15342 81 aa14.77□□□□□ -0.04
TNFSF9-201ENST00000245817 ECSCRQ19T08 205 aa14.77□□□□□ -0.04
TNFSF9-201ENST00000245817 BPIFCQ8NFQ6 507 aa14.77□□□□□ -0.04
TNFSF9-201ENST00000245817 OR5R1Q8NH85 324 aa14.77□□□□□ -0.04
TNFSF9-201ENST00000245817 MBD3L1Q8WWY6 194 aa14.77□□□□□ -0.04
TNFSF9-201ENST00000245817 NARS2Q96I59 477 aaKnown RBP14.77□□□□□ -0.04
TNFSF9-201ENST00000245817 IGKV1OR2-108A0A075B7D4 117 aa14.77□□□□□ -0.05
TNFSF9-201ENST00000245817 TRAV1-1A0A0B4J248 108 aa14.77□□□□□ -0.05
TNFSF9-201ENST00000245817 ANKRD34BA5PLL1 514 aa14.77□□□□□ -0.05
TNFSF9-201ENST00000245817 SH2D7A6NKC9 451 aaPredicted RBP14.77□□□□□ -0.05
TNFSF9-201ENST00000245817 CYP2G1PQ6ZSU1 146 aa14.77□□□□□ -0.05
TNFSF9-201ENST00000245817 THAP8Q8NA92 274 aa14.77□□□□□ -0.05
TNFSF9-201ENST00000245817 TMEM116Q8NCL8 245 aa14.77□□□□□ -0.05
TNFSF9-201ENST00000245817 EIF5A2Q9GZV4 153 aaKnown RBP14.77□□□□□ -0.05
TNFSF9-201ENST00000245817 SLC25A22Q9H936 323 aa14.77□□□□□ -0.05
TNFSF9-201ENST00000245817 TREM1Q9NP99 234 aa14.77□□□□□ -0.05
TNFSF9-201ENST00000245817 DMRT1Q9Y5R6 373 aa14.77□□□□□ -0.05
TNFSF9-201ENST00000245817 MAP1LC3B2A6NCE7 125 aa14.76□□□□□ -0.05
TNFSF9-201ENST00000245817 I3L2K1 104 aa14.76□□□□□ -0.05
TNFSF9-201ENST00000245817 HIST1H1BP16401 226 aaKnown RBP14.76□□□□□ -0.05
TNFSF9-201ENST00000245817 CDC34P49427 236 aaPredicted RBP14.76□□□□□ -0.05
TNFSF9-201ENST00000245817 SELENOTP62341 195 aa14.76□□□□□ -0.05
TNFSF9-201ENST00000245817 AKIRIN2Q53H80 203 aa14.76□□□□□ -0.05
TNFSF9-201ENST00000245817 MAP1LC3BQ9GZQ8 125 aa14.76□□□□□ -0.05
TNFSF9-201ENST00000245817 FLNAP21333 2647 aaKnown RBP14.76□□□□□ -0.05
TNFSF9-201ENST00000245817 TCRBV4S1A1TA0A5B7 111 aa14.75□□□□□ -0.05
TNFSF9-201ENST00000245817 YIF1AO95070 293 aa14.75□□□□□ -0.05
TNFSF9-201ENST00000245817 IER3P46695 156 aa14.75□□□□□ -0.05
TNFSF9-201ENST00000245817 PRR20EP86478 221 aa14.75□□□□□ -0.05
TNFSF9-201ENST00000245817 PRR20CP86479 221 aa14.75□□□□□ -0.05
TNFSF9-201ENST00000245817 PRR20DP86480 221 aa14.75□□□□□ -0.05
TNFSF9-201ENST00000245817 PRR20BP86481 221 aa14.75□□□□□ -0.05
TNFSF9-201ENST00000245817 PRR20AP86496 221 aa14.75□□□□□ -0.05
TNFSF9-201ENST00000245817 PEA15Q15121 130 aa14.75□□□□□ -0.05
TNFSF9-201ENST00000245817 ZNF726P1Q15940 193 aa14.75□□□□□ -0.05
TNFSF9-201ENST00000245817 SPSB3Q6PJ21 355 aa14.75□□□□□ -0.05
TNFSF9-201ENST00000245817 FAM110DQ8TAY7 271 aaPredicted RBP14.75□□□□□ -0.05
TNFSF9-201ENST00000245817 FAM210AQ96ND0 272 aa14.75□□□□□ -0.05
TNFSF9-201ENST00000245817 TNFRSF19Q9NS68 423 aa14.75□□□□□ -0.05
TNFSF9-201ENST00000245817 ZNF355PQ9NSJ1 428 aa14.75□□□□□ -0.05
TNFSF9-201ENST00000245817 IGLV11-55A0A075B6I3 123 aa14.74□□□□□ -0.05
TNFSF9-201ENST00000245817 KRBOX1C9JBD0 128 aa14.74□□□□□ -0.05
TNFSF9-201ENST00000245817 IGHV4-59P01825 116 aa14.74□□□□□ -0.05
TNFSF9-201ENST00000245817 AMY1AP04745 511 aa14.74□□□□□ -0.05
TNFSF9-201ENST00000245817 GCSAMLQ5JQS6 135 aa14.74□□□□□ -0.05
TNFSF9-201ENST00000245817 OR4X1Q8NH49 305 aa14.74□□□□□ -0.05
TNFSF9-201ENST00000245817 RAB24Q969Q5 203 aa14.74□□□□□ -0.05
TNFSF9-201ENST00000245817 FGF8P55075 233 aaPredicted RBP14.74□□□□□ -0.05
TNFSF9-201ENST00000245817 RHOBP62745 196 aa14.74□□□□□ -0.05
TNFSF9-201ENST00000245817 GUK1Q16774 197 aa14.74□□□□□ -0.05
TNFSF9-201ENST00000245817 TOR2AQ5JU69 321 aa14.74□□□□□ -0.05
TNFSF9-201ENST00000245817 Q6YL49 198 aa14.74□□□□□ -0.05
TNFSF9-201ENST00000245817 SLC35E3Q7Z769 313 aa14.74□□□□□ -0.05
TNFSF9-201ENST00000245817 FANCD2OSQ96PS1 177 aa14.74□□□□□ -0.05
TNFSF9-201ENST00000245817 TRGV9Q99603 122 aa14.74□□□□□ -0.05
TNFSF9-201ENST00000245817 C19orf24Q9BVV8 132 aa14.74□□□□□ -0.05
TNFSF9-201ENST00000245817 MRPL36Q9P0J6 103 aaKnown RBP14.74□□□□□ -0.05
TNFSF9-201ENST00000245817 ABCA1O95477 2261 aa14.73□□□□□ -0.05
TNFSF9-201ENST00000245817 ACANP16112 2415 aa14.73□□□□□ -0.05
TNFSF9-201ENST00000245817 SEC14L6B5MCN3 397 aa14.73□□□□□ -0.05
TNFSF9-201ENST00000245817 K7EIM0 57 aa14.73□□□□□ -0.05
TNFSF9-201ENST00000245817 LINC00869P0C866 280 aa14.73□□□□□ -0.05
TNFSF9-201ENST00000245817 GATA2P23769 480 aaPredicted RBP14.73□□□□□ -0.05
TNFSF9-201ENST00000245817 SRP14P37108 136 aaKnown RBP14.73□□□□□ -0.05
TNFSF9-201ENST00000245817 NPBWR1P48145 328 aa14.73□□□□□ -0.05
TNFSF9-201ENST00000245817 CCL20P78556 96 aa14.73□□□□□ -0.05
TNFSF9-201ENST00000245817 SSX7Q7RTT5 188 aa14.73□□□□□ -0.05
TNFSF9-201ENST00000245817 TMEM231Q9H6L2 316 aa14.73□□□□□ -0.05
TNFSF9-201ENST00000245817 NAV3Q8IVL0 2385 aa14.72□□□□□ -0.05
TNFSF9-201ENST00000245817 TRAV41A0A0B4J266 112 aa14.72□□□□□ -0.05
TNFSF9-201ENST00000245817 LINC01548A6NM66 108 aa14.72□□□□□ -0.05
TNFSF9-201ENST00000245817 HMGB3O15347 200 aaKnown RBP14.72□□□□□ -0.05
TNFSF9-201ENST00000245817 CD5LO43866 347 aa14.72□□□□□ -0.05
TNFSF9-201ENST00000245817 IFNA1P01562 189 aa14.72□□□□□ -0.05
TNFSF9-201ENST00000245817 FABP1P07148 127 aa14.72□□□□□ -0.05
TNFSF9-201ENST00000245817 CELSR1Q9NYQ6 3014 aa14.72□□□□□ -0.05
TNFSF9-201ENST00000245817 IGKV1D-37A0A075B6S9 117 aa14.71□□□□□ -0.05
TNFSF9-201ENST00000245817 RBFOX3A6NFN3 312 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms