RNA–Protein interactions for RNA: ENST00000244302.8

HIF3A-201, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 1 (best)

Gene HIF3A, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-201ENST00000244302 RPL8P62917 257 aaKnown RBP10.28□□□□□ -0.76
HIF3A-201ENST00000244302 AARDQ4LEZ3 155 aa10.28□□□□□ -0.76
HIF3A-201ENST00000244302 ZNF727A8MUV8 499 aa10.28□□□□□ -0.76
HIF3A-201ENST00000244302 LGALS7P47929 136 aa10.28□□□□□ -0.76
HIF3A-201ENST00000244302 CEBPGP53567 150 aa10.28□□□□□ -0.76
HIF3A-201ENST00000244302 SPCS3P61009 180 aa10.28□□□□□ -0.76
HIF3A-201ENST00000244302 KRTAP1-1Q07627 177 aa10.28□□□□□ -0.76
HIF3A-201ENST00000244302 LY6EQ16553 131 aa10.28□□□□□ -0.76
HIF3A-201ENST00000244302 PRSS8Q16651 343 aa10.28□□□□□ -0.76
HIF3A-201ENST00000244302 MLANAQ16655 118 aa10.28□□□□□ -0.76
HIF3A-201ENST00000244302 FAM90A2PQ658T7 463 aa10.28□□□□□ -0.76
HIF3A-201ENST00000244302 OR8G2PQ6IF36 304 aa10.28□□□□□ -0.76
HIF3A-201ENST00000244302 GGACTQ9BVM4 153 aa10.28□□□□□ -0.76
HIF3A-201ENST00000244302 GAR1Q9NY12 217 aaKnown RBP10.28□□□□□ -0.76
HIF3A-201ENST00000244302 DOK5Q9P104 306 aa10.28□□□□□ -0.76
HIF3A-201ENST00000244302 LINC01548A6NM66 108 aa10.27□□□□□ -0.77
HIF3A-201ENST00000244302 WT1-ASQ06250 92 aa10.27□□□□□ -0.77
HIF3A-201ENST00000244302 TNXAQ16473 311 aa10.27□□□□□ -0.77
HIF3A-201ENST00000244302 LRRC75BQ2VPJ9 315 aa10.27□□□□□ -0.77
HIF3A-201ENST00000244302 VMA21Q3ZAQ7 101 aa10.27□□□□□ -0.77
HIF3A-201ENST00000244302 CYB5R2Q6BCY4 276 aa10.27□□□□□ -0.77
HIF3A-201ENST00000244302 Q8N6K4 173 aa10.27□□□□□ -0.77
HIF3A-201ENST00000244302 CTDSP1Q9GZU7 261 aa10.27□□□□□ -0.77
HIF3A-201ENST00000244302 HEYLQ9NQ87 328 aaPredicted RBP10.27□□□□□ -0.77
HIF3A-201ENST00000244302 TNFRSF19Q9NS68 423 aa10.27□□□□□ -0.77
HIF3A-201ENST00000244302 GNG13Q9P2W3 67 aa10.27□□□□□ -0.77
HIF3A-201ENST00000244302 TIMM9Q9Y5J7 89 aa10.27□□□□□ -0.77
HIF3A-201ENST00000244302 C15orf62A8K5M9 175 aa10.27□□□□□ -0.77
HIF3A-201ENST00000244302 PMS2P5A8MQ11 134 aa10.27□□□□□ -0.77
HIF3A-201ENST00000244302 CLDN34H7C241 214 aa10.27□□□□□ -0.77
HIF3A-201ENST00000244302 GATCO43716 136 aaKnown RBP10.27□□□□□ -0.77
HIF3A-201ENST00000244302 CXCL1P09341 107 aa10.27□□□□□ -0.77
HIF3A-201ENST00000244302 TMEM11P17152 192 aa10.27□□□□□ -0.77
HIF3A-201ENST00000244302 TMEM41BQ5BJD5 291 aa10.27□□□□□ -0.77
HIF3A-201ENST00000244302 PPP1R27Q86WC6 154 aa10.27□□□□□ -0.77
HIF3A-201ENST00000244302 SSX3Q99909 188 aa10.27□□□□□ -0.77
HIF3A-201ENST00000244302 NDUFA4L2Q9NRX3 87 aa10.27□□□□□ -0.77
HIF3A-201ENST00000244302 RPRMQ9NS64 109 aa10.27□□□□□ -0.77
HIF3A-201ENST00000244302 VAX2Q9UIW0 290 aa10.27□□□□□ -0.77
HIF3A-201ENST00000244302 NBR2O15453 112 aa10.26□□□□□ -0.77
HIF3A-201ENST00000244302 CA2P00918 260 aa10.26□□□□□ -0.77
HIF3A-201ENST00000244302 AREGP15514 252 aa10.26□□□□□ -0.77
HIF3A-201ENST00000244302 NDUFA6P56556 154 aa10.26□□□□□ -0.77
HIF3A-201ENST00000244302 RAB11AP62491 216 aa10.26□□□□□ -0.77
HIF3A-201ENST00000244302 NDPQ00604 133 aa10.26□□□□□ -0.77
HIF3A-201ENST00000244302 PLGLAQ15195 96 aa10.26□□□□□ -0.77
HIF3A-201ENST00000244302 DEFB112Q30KQ8 113 aa10.26□□□□□ -0.77
HIF3A-201ENST00000244302 CCDC144NLQ6NUI1 221 aa10.26□□□□□ -0.77
HIF3A-201ENST00000244302 OR2T10Q8NGZ9 312 aa10.26□□□□□ -0.77
HIF3A-201ENST00000244302 COMMD5Q9GZQ3 224 aa10.26□□□□□ -0.77
HIF3A-201ENST00000244302 PRNDQ9UKY0 176 aa10.26□□□□□ -0.77
HIF3A-201ENST00000244302 TRBV24-1A0A075B6N3 115 aa10.25□□□□□ -0.77
HIF3A-201ENST00000244302 HIST1H2BKO60814 126 aa10.25□□□□□ -0.77
HIF3A-201ENST00000244302 YIF1AO95070 293 aa10.25□□□□□ -0.77
HIF3A-201ENST00000244302 IGHV3-48P01763 117 aa10.25□□□□□ -0.77
HIF3A-201ENST00000244302 HIST1H2BJP06899 126 aa10.25□□□□□ -0.77
HIF3A-201ENST00000244302 HIST1H2BOP23527 126 aa10.25□□□□□ -0.77
HIF3A-201ENST00000244302 HIST1H2BBP33778 126 aa10.25□□□□□ -0.77
HIF3A-201ENST00000244302 HIST1H2BDP58876 126 aa10.25□□□□□ -0.77
HIF3A-201ENST00000244302 HIST1H2BCP62807 126 aa10.25□□□□□ -0.77
HIF3A-201ENST00000244302 PRCDQ00LT1 54 aa10.25□□□□□ -0.77
HIF3A-201ENST00000244302 EBI3Q14213 229 aa10.25□□□□□ -0.77
HIF3A-201ENST00000244302 HIST2H2BEQ16778 126 aa10.25□□□□□ -0.77
HIF3A-201ENST00000244302 FAM209BQ5JX69 171 aa10.25□□□□□ -0.77
HIF3A-201ENST00000244302 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.25□□□□□ -0.77
HIF3A-201ENST00000244302 ZNF343Q6P1L6 599 aa10.25□□□□□ -0.77
HIF3A-201ENST00000244302 TMEM14EPQ6UXP3 125 aa10.25□□□□□ -0.77
HIF3A-201ENST00000244302 LILRB2Q8N423 598 aa10.25□□□□□ -0.77
HIF3A-201ENST00000244302 TEX45Q8NA69 505 aa10.25□□□□□ -0.77
HIF3A-201ENST00000244302 OR52E5Q8NH55 327 aa10.25□□□□□ -0.77
HIF3A-201ENST00000244302 HIST1H2BHQ93079 126 aa10.25□□□□□ -0.77
HIF3A-201ENST00000244302 RCC1LQ96I51 464 aaKnown RBP10.25□□□□□ -0.77
HIF3A-201ENST00000244302 HIST1H2BNQ99877 126 aa10.25□□□□□ -0.77
HIF3A-201ENST00000244302 HIST1H2BMQ99879 126 aa10.25□□□□□ -0.77
HIF3A-201ENST00000244302 RSG1Q9BU20 258 aa10.25□□□□□ -0.77
HIF3A-201ENST00000244302 CYSRT1A8MQ03 144 aa10.25□□□□□ -0.77
HIF3A-201ENST00000244302 H3BUX3 64 aa10.25□□□□□ -0.77
HIF3A-201ENST00000244302 PPP1R2P9O14990 202 aa10.25□□□□□ -0.77
HIF3A-201ENST00000244302 CYB5BO43169 146 aa10.25□□□□□ -0.77
HIF3A-201ENST00000244302 IFNA10P01566 189 aa10.25□□□□□ -0.77
HIF3A-201ENST00000244302 GATA3P23771 443 aa10.25□□□□□ -0.77
HIF3A-201ENST00000244302 Q8N9W7 124 aa10.25□□□□□ -0.77
HIF3A-201ENST00000244302 NPBQ8NG41 125 aa10.25□□□□□ -0.77
HIF3A-201ENST00000244302 FAM210BQ96KR6 192 aa10.25□□□□□ -0.77
HIF3A-201ENST00000244302 HSPB9Q9BQS6 159 aa10.25□□□□□ -0.77
HIF3A-201ENST00000244302 WDR61Q9GZS3 305 aaKnown RBP10.25□□□□□ -0.77
HIF3A-201ENST00000244302 SDF2L1Q9HCN8 221 aa10.25□□□□□ -0.77
HIF3A-201ENST00000244302 TGIF2-C20orf24A0A0A6YYL0 155 aa10.24□□□□□ -0.77
HIF3A-201ENST00000244302 OOSP1A8MZH6 123 aa10.24□□□□□ -0.77
HIF3A-201ENST00000244302 NDUFA3O95167 84 aa10.24□□□□□ -0.77
HIF3A-201ENST00000244302 FAM106CPP0CH98 169 aa10.24□□□□□ -0.77
HIF3A-201ENST00000244302 ATP6V1FQ16864 119 aa10.24□□□□□ -0.77
HIF3A-201ENST00000244302 C5orf64Q2M2E5 130 aa10.24□□□□□ -0.77
HIF3A-201ENST00000244302 PDLIM3Q53GG5 364 aaPredicted RBP10.24□□□□□ -0.77
HIF3A-201ENST00000244302 Q6ZS46 218 aa10.24□□□□□ -0.77
HIF3A-201ENST00000244302 CENPVQ7Z7K6 275 aaPredicted RBP10.24□□□□□ -0.77
HIF3A-201ENST00000244302 TAF15Q92804 592 aaKnown RBP eCLIP10.24□□□□□ -0.77
HIF3A-201ENST00000244302 ZNF48Q96MX3 618 aaPredicted RBP10.24□□□□□ -0.77
HIF3A-201ENST00000244302 MEGF9Q9H1U4 602 aa10.24□□□□□ -0.77
HIF3A-201ENST00000244302 ZFP92A6NM28 416 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms