RNA–Protein interactions for RNA: ENST00000234668.6

SYDE2-201, Transcript of synapse defective Rho GTPase homolog 2, humanhuman

TSL 1 (best)

Gene SYDE2, Length 3,000 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE2-201ENST00000234668 TMEM106BQ9NUM4 274 aa7.4□□□□□ -1.23
SYDE2-201ENST00000234668 TP53TG3Q9ULZ0 132 aa7.4□□□□□ -1.23
SYDE2-201ENST00000234668 TYMSP04818 313 aa7.39□□□□□ -1.23
SYDE2-201ENST00000234668 GNG5P63218 68 aa7.39□□□□□ -1.23
SYDE2-201ENST00000234668 CD69Q07108 199 aa7.39□□□□□ -1.23
SYDE2-201ENST00000234668 TEX36Q5VZQ5 186 aa7.39□□□□□ -1.23
SYDE2-201ENST00000234668 GBGT1Q8N5D6 347 aa7.39□□□□□ -1.23
SYDE2-201ENST00000234668 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.39□□□□□ -1.23
SYDE2-201ENST00000234668 OR5AU1Q8NGC0 362 aa7.39□□□□□ -1.23
SYDE2-201ENST00000234668 MISP3Q96FF7 219 aa7.39□□□□□ -1.23
SYDE2-201ENST00000234668 A0A1W2PRD5 423 aa7.39□□□□□ -1.23
SYDE2-201ENST00000234668 A0A1W2PRF3 423 aa7.39□□□□□ -1.23
SYDE2-201ENST00000234668 A0A1W2PRM7 423 aa7.39□□□□□ -1.23
SYDE2-201ENST00000234668 E7EQL1 145 aa7.39□□□□□ -1.23
SYDE2-201ENST00000234668 SERF1AO75920 110 aa7.39□□□□□ -1.23
SYDE2-201ENST00000234668 COX7A1P24310 79 aa7.39□□□□□ -1.23
SYDE2-201ENST00000234668 CD24P25063 80 aa7.39□□□□□ -1.23
SYDE2-201ENST00000234668 RANP62826 216 aaKnown RBP7.39□□□□□ -1.23
SYDE2-201ENST00000234668 UBE2L3P68036 154 aaKnown RBP7.39□□□□□ -1.23
SYDE2-201ENST00000234668 ERHP84090 104 aaKnown RBP7.39□□□□□ -1.23
SYDE2-201ENST00000234668 KIR3DL3Q8N743 410 aa7.39□□□□□ -1.23
SYDE2-201ENST00000234668 MS4A10Q96PG2 267 aa7.39□□□□□ -1.23
SYDE2-201ENST00000234668 GAL3ST2Q9H3Q3 398 aa7.39□□□□□ -1.23
SYDE2-201ENST00000234668 NDUFA4L2Q9NRX3 87 aa7.39□□□□□ -1.23
SYDE2-201ENST00000234668 TECRQ9NZ01 308 aaKnown RBP7.39□□□□□ -1.23
SYDE2-201ENST00000234668 ZMAT5Q9UDW3 170 aaKnown RBP7.39□□□□□ -1.23
SYDE2-201ENST00000234668 VPS13CQ709C8 3753 aa7.39□□□□□ -1.23
SYDE2-201ENST00000234668 MT-CO2P00403 227 aa7.38□□□□□ -1.23
SYDE2-201ENST00000234668 AREGP15514 252 aa7.38□□□□□ -1.23
SYDE2-201ENST00000234668 LCN2P80188 198 aa7.38□□□□□ -1.23
SYDE2-201ENST00000234668 ZNF833PQ6ZTB9 187 aa7.38□□□□□ -1.23
SYDE2-201ENST00000234668 BAGE3Q86Y29 109 aa7.38□□□□□ -1.23
SYDE2-201ENST00000234668 BAGE2Q86Y30 109 aa7.38□□□□□ -1.23
SYDE2-201ENST00000234668 DMRTC2Q8IXT2 367 aaPredicted RBP7.38□□□□□ -1.23
SYDE2-201ENST00000234668 OR1L8Q8NGR8 309 aa7.38□□□□□ -1.23
SYDE2-201ENST00000234668 CORO2AQ92828 525 aa7.38□□□□□ -1.23
SYDE2-201ENST00000234668 RNASE6Q93091 150 aaKnown RBP7.38□□□□□ -1.23
SYDE2-201ENST00000234668 ASCL2Q99929 193 aa7.38□□□□□ -1.23
SYDE2-201ENST00000234668 ATG101Q9BSB4 218 aa7.38□□□□□ -1.23
SYDE2-201ENST00000234668 SLC25A33Q9BSK2 321 aa7.38□□□□□ -1.23
SYDE2-201ENST00000234668 ZNF355PQ9NSJ1 428 aa7.38□□□□□ -1.23
SYDE2-201ENST00000234668 FKBP11Q9NYL4 201 aa7.38□□□□□ -1.23
SYDE2-201ENST00000234668 IL36BQ9NZH7 164 aa7.38□□□□□ -1.23
SYDE2-201ENST00000234668 V9GYV3 84 aa7.38□□□□□ -1.23
SYDE2-201ENST00000234668 HRNRQ86YZ3 2850 aaPredicted RBP7.38□□□□□ -1.23
SYDE2-201ENST00000234668 ITGB1BP1O14713 200 aa7.38□□□□□ -1.23
SYDE2-201ENST00000234668 LINC00310P59036 64 aa7.38□□□□□ -1.23
SYDE2-201ENST00000234668 COA6Q5JTJ3 125 aaKnown RBP7.38□□□□□ -1.23
SYDE2-201ENST00000234668 PATE2Q6UY27 113 aa7.38□□□□□ -1.23
SYDE2-201ENST00000234668 LINC00469Q8N7U9 141 aa7.38□□□□□ -1.23
SYDE2-201ENST00000234668 SLC35E1Q96K37 410 aa7.38□□□□□ -1.23
SYDE2-201ENST00000234668 RAB9BQ9NP90 201 aa7.38□□□□□ -1.23
SYDE2-201ENST00000234668 CBLN4Q9NTU7 201 aa7.38□□□□□ -1.23
SYDE2-201ENST00000234668 A0A1W2PPI3 338 aa7.38□□□□□ -1.23
SYDE2-201ENST00000234668 C8orf88P0DMB2 117 aa7.38□□□□□ -1.23
SYDE2-201ENST00000234668 CRISP2P16562 243 aa7.38□□□□□ -1.23
SYDE2-201ENST00000234668 LOXP28300 417 aaPredicted RBP7.38□□□□□ -1.23
SYDE2-201ENST00000234668 PDLIM4P50479 330 aa7.38□□□□□ -1.23
SYDE2-201ENST00000234668 POU2AF1Q16633 256 aa7.38□□□□□ -1.23
SYDE2-201ENST00000234668 TMEM249Q2WGJ8 235 aa7.38□□□□□ -1.23
SYDE2-201ENST00000234668 C2orf83Q53S99 150 aa7.38□□□□□ -1.23
SYDE2-201ENST00000234668 LRRC10Q5BKY1 277 aa7.38□□□□□ -1.23
SYDE2-201ENST00000234668 TGIF2LXQ8IUE1 241 aa7.38□□□□□ -1.23
SYDE2-201ENST00000234668 OR5AN1Q8NGI8 311 aa7.38□□□□□ -1.23
SYDE2-201ENST00000234668 SLC25A2Q9BXI2 301 aa7.38□□□□□ -1.23
SYDE2-201ENST00000234668 DNAJC4Q9NNZ3 241 aa7.38□□□□□ -1.23
SYDE2-201ENST00000234668 BET1LQ9NYM9 111 aa7.38□□□□□ -1.23
SYDE2-201ENST00000234668 NAT8BQ9UHF3 227 aa7.38□□□□□ -1.23
SYDE2-201ENST00000234668 RNF114Q9Y508 228 aa7.38□□□□□ -1.23
SYDE2-201ENST00000234668 S4R3C0 116 aa7.38□□□□□ -1.23
SYDE2-201ENST00000234668 SPG11Q96JI7 2443 aa7.37□□□□□ -1.23
SYDE2-201ENST00000234668 FAM90A27PA6NNH2 459 aa7.37□□□□□ -1.23
SYDE2-201ENST00000234668 A8MWP6 167 aa7.37□□□□□ -1.23
SYDE2-201ENST00000234668 COX7A2P2O60397 106 aa7.37□□□□□ -1.23
SYDE2-201ENST00000234668 CD99P14209 185 aa7.37□□□□□ -1.23
SYDE2-201ENST00000234668 CDKN1AP38936 164 aa7.37□□□□□ -1.23
SYDE2-201ENST00000234668 TDGF1P3P51864 188 aa7.37□□□□□ -1.23
SYDE2-201ENST00000234668 TNXAQ16473 311 aa7.37□□□□□ -1.23
SYDE2-201ENST00000234668 RPEL1Q2QD12 228 aa7.37□□□□□ -1.23
SYDE2-201ENST00000234668 TIGITQ495A1 244 aa7.37□□□□□ -1.23
SYDE2-201ENST00000234668 NUP37Q8NFH4 326 aa7.37□□□□□ -1.23
SYDE2-201ENST00000234668 OR1B1Q8NGR6 318 aa7.37□□□□□ -1.23
SYDE2-201ENST00000234668 OR5B3Q8NH48 314 aa7.37□□□□□ -1.23
SYDE2-201ENST00000234668 CMTM2Q8TAZ6 248 aa7.37□□□□□ -1.23
SYDE2-201ENST00000234668 FAM167A-AS1Q96KT0 104 aa7.37□□□□□ -1.23
SYDE2-201ENST00000234668 ZNF257Q9Y2Q1 563 aa7.37□□□□□ -1.23
SYDE2-201ENST00000234668 REC114Q7Z4M0 266 aa7.37□□□□□ -1.23
SYDE2-201ENST00000234668 OR4C13Q8NGP0 309 aa7.37□□□□□ -1.23
SYDE2-201ENST00000234668 TBX15Q96SF7 602 aa7.37□□□□□ -1.23
SYDE2-201ENST00000234668 HSPB9Q9BQS6 159 aa7.37□□□□□ -1.23
SYDE2-201ENST00000234668 CORTO00230 105 aa7.36□□□□□ -1.23
SYDE2-201ENST00000234668 IGLV2-23P01705 113 aa7.36□□□□□ -1.23
SYDE2-201ENST00000234668 IGLV2-8P01709 118 aa7.36□□□□□ -1.23
SYDE2-201ENST00000234668 MFAP2P55001 183 aa7.36□□□□□ -1.23
SYDE2-201ENST00000234668 Q6ZWC4 215 aa7.36□□□□□ -1.23
SYDE2-201ENST00000234668 Q71RC1 249 aaPredicted RBP7.36□□□□□ -1.23
SYDE2-201ENST00000234668 OR5R1Q8NH85 324 aa7.36□□□□□ -1.23
SYDE2-201ENST00000234668 OSR1Q8TAX0 266 aaPredicted RBP7.36□□□□□ -1.23
SYDE2-201ENST00000234668 RNASEH2CQ8TDP1 164 aaKnown RBP7.36□□□□□ -1.23
SYDE2-201ENST00000234668 LINC00574Q9H8X3 128 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms