RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 SPATA31B1PQ5VZV4 182 aa11.13□□□□□ -0.63
NEK4-201ENST00000233027 FAM169BQ8N8A8 192 aa11.13□□□□□ -0.63
NEK4-201ENST00000233027 C19orf67A6NJJ6 358 aa11.13□□□□□ -0.63
NEK4-201ENST00000233027 LYNX1G3V0Z9 82 aa11.13□□□□□ -0.63
NEK4-201ENST00000233027 LYNX1P0DP58 116 aa11.13□□□□□ -0.63
NEK4-201ENST00000233027 MPZP25189 248 aa11.13□□□□□ -0.63
NEK4-201ENST00000233027 NHP2Q9NX24 153 aaKnown RBP11.13□□□□□ -0.63
NEK4-201ENST00000233027 TOMM7Q9P0U1 55 aa11.13□□□□□ -0.63
NEK4-201ENST00000233027 SPRR3Q9UBC9 169 aa11.13□□□□□ -0.63
NEK4-201ENST00000233027 RP1P56715 2156 aa11.13□□□□□ -0.63
NEK4-201ENST00000233027 COLCA2A8K830 154 aa11.13□□□□□ -0.63
NEK4-201ENST00000233027 IGHV4-39P01824 125 aa11.13□□□□□ -0.63
NEK4-201ENST00000233027 CD5P06127 495 aa11.13□□□□□ -0.63
NEK4-201ENST00000233027 GZMBP10144 247 aa11.13□□□□□ -0.63
NEK4-201ENST00000233027 CDKN1AP38936 164 aa11.13□□□□□ -0.63
NEK4-201ENST00000233027 FAM90A1Q86YD7 464 aa11.13□□□□□ -0.63
NEK4-201ENST00000233027 OR5AN1Q8NGI8 311 aa11.13□□□□□ -0.63
NEK4-201ENST00000233027 FAM57AQ8TBR7 257 aa11.13□□□□□ -0.63
NEK4-201ENST00000233027 WFDC12Q8WWY7 111 aa11.13□□□□□ -0.63
NEK4-201ENST00000233027 IGKV1-27A0A075B6S5 117 aa11.12□□□□□ -0.63
NEK4-201ENST00000233027 TCRBV4S1A1TA0A5B7 111 aa11.12□□□□□ -0.63
NEK4-201ENST00000233027 LINC00469Q8N7U9 141 aa11.12□□□□□ -0.63
NEK4-201ENST00000233027 DNAJC13O75165 2243 aa11.12□□□□□ -0.63
NEK4-201ENST00000233027 SUPT4H1P63272 117 aaKnown RBP11.12□□□□□ -0.63
NEK4-201ENST00000233027 RNF144BQ7Z419 303 aa11.12□□□□□ -0.63
NEK4-201ENST00000233027 HIST3H2BBQ8N257 126 aa11.12□□□□□ -0.63
NEK4-201ENST00000233027 KLHDC3Q9BQ90 382 aa11.12□□□□□ -0.63
NEK4-201ENST00000233027 SEC16AO15027 2179 aa11.12□□□□□ -0.63
NEK4-201ENST00000233027 A0A1B0GW15 77 aa11.12□□□□□ -0.63
NEK4-201ENST00000233027 RIPPLY3P57055 190 aa11.12□□□□□ -0.63
NEK4-201ENST00000233027 FBLN7Q53RD9 439 aa11.12□□□□□ -0.63
NEK4-201ENST00000233027 ABHD17AQ96GS6 310 aa11.12□□□□□ -0.63
NEK4-201ENST00000233027 COQ2Q96H96 371 aa11.12□□□□□ -0.63
NEK4-201ENST00000233027 A0A1W2PRX2 142 aa11.12□□□□□ -0.63
NEK4-201ENST00000233027 NBR2O15453 112 aa11.12□□□□□ -0.63
NEK4-201ENST00000233027 EFNA2O43921 213 aa11.12□□□□□ -0.63
NEK4-201ENST00000233027 FOXG1P55316 489 aaPredicted RBP11.12□□□□□ -0.63
NEK4-201ENST00000233027 TMEM95Q3KNT9 176 aa11.12□□□□□ -0.63
NEK4-201ENST00000233027 Q6AWC8 147 aa11.12□□□□□ -0.63
NEK4-201ENST00000233027 H7C1H1 209 aa11.12□□□□□ -0.63
NEK4-201ENST00000233027 IGLV3-19P01714 112 aa11.12□□□□□ -0.63
NEK4-201ENST00000233027 DUTP33316 252 aaKnown RBP11.12□□□□□ -0.63
NEK4-201ENST00000233027 TIMP3P35625 211 aa11.12□□□□□ -0.63
NEK4-201ENST00000233027 MEGF9Q9H1U4 602 aa11.12□□□□□ -0.63
NEK4-201ENST00000233027 MRPS18CQ9Y3D5 142 aaKnown RBP11.12□□□□□ -0.63
NEK4-201ENST00000233027 IGHV1-18A0A0C4DH31 117 aa11.11□□□□□ -0.63
NEK4-201ENST00000233027 PF4P02776 101 aa11.11□□□□□ -0.63
NEK4-201ENST00000233027 LINC01587Q99440 93 aa11.11□□□□□ -0.63
NEK4-201ENST00000233027 REG4Q9BYZ8 158 aa11.11□□□□□ -0.63
NEK4-201ENST00000233027 C5orf63A6NC05 138 aa11.11□□□□□ -0.63
NEK4-201ENST00000233027 TEX38Q6PEX7 206 aa11.11□□□□□ -0.63
NEK4-201ENST00000233027 IGLV3-12A0A075B6K2 115 aa11.11□□□□□ -0.63
NEK4-201ENST00000233027 LTBRP36941 435 aa11.11□□□□□ -0.63
NEK4-201ENST00000233027 RNF125Q96EQ8 232 aa11.11□□□□□ -0.63
NEK4-201ENST00000233027 JMJD8Q96S16 334 aa11.11□□□□□ -0.63
NEK4-201ENST00000233027 OSTCQ9NRP0 149 aa11.11□□□□□ -0.63
NEK4-201ENST00000233027 ZNF257Q9Y2Q1 563 aa11.11□□□□□ -0.63
NEK4-201ENST00000233027 TRAV9-2A0A087WT02 112 aa11.11□□□□□ -0.63
NEK4-201ENST00000233027 A0A1B0GV72 72 aa11.11□□□□□ -0.63
NEK4-201ENST00000233027 CACNG7P62955 275 aa11.11□□□□□ -0.63
NEK4-201ENST00000233027 DPH3Q96FX2 82 aa11.11□□□□□ -0.63
NEK4-201ENST00000233027 KNTC1P50748 2209 aa11.11□□□□□ -0.63
NEK4-201ENST00000233027 CD7P09564 240 aa11.1□□□□□ -0.63
NEK4-201ENST00000233027 GNB1LQ9BYB4 327 aa11.1□□□□□ -0.63
NEK4-201ENST00000233027 NUDT10Q8NFP7 164 aa11.1□□□□□ -0.63
NEK4-201ENST00000233027 PSG8Q9UQ74 426 aa11.1□□□□□ -0.63
NEK4-201ENST00000233027 TRAV12-3A0A0B4J271 114 aa11.1□□□□□ -0.63
NEK4-201ENST00000233027 AMBPP02760 352 aa11.1□□□□□ -0.63
NEK4-201ENST00000233027 CACNA1IQ9P0X4 2223 aa11.1□□□□□ -0.63
NEK4-201ENST00000233027 CRYGSP22914 178 aa11.1□□□□□ -0.63
NEK4-201ENST00000233027 OR5A1Q8NGJ0 315 aa11.1□□□□□ -0.63
NEK4-201ENST00000233027 VKORC1Q9BQB6 163 aa11.1□□□□□ -0.63
NEK4-201ENST00000233027 FABP5P3A8MUU1 101 aa11.1□□□□□ -0.63
NEK4-201ENST00000233027 ZIC4Q8N9L1 334 aa11.1□□□□□ -0.63
NEK4-201ENST00000233027 DEFB104AQ8WTQ1 72 aa11.1□□□□□ -0.63
NEK4-201ENST00000233027 CRIM1Q9NZV1 1036 aa11.1□□□□□ -0.63
NEK4-201ENST00000233027 PRCDQ00LT1 54 aa11.09□□□□□ -0.63
NEK4-201ENST00000233027 FOXL1Q12952 345 aa11.09□□□□□ -0.63
NEK4-201ENST00000233027 TREML4Q6UXN2 200 aa11.09□□□□□ -0.63
NEK4-201ENST00000233027 C5orf30Q96GV9 206 aa11.09□□□□□ -0.63
NEK4-201ENST00000233027 MBD3L1Q8WWY6 194 aa11.09□□□□□ -0.63
NEK4-201ENST00000233027 HBDP02042 147 aa11.09□□□□□ -0.63
NEK4-201ENST00000233027 SRD5A1P18405 259 aa11.09□□□□□ -0.63
NEK4-201ENST00000233027 TMEM133Q9H2Q1 129 aa11.09□□□□□ -0.63
NEK4-201ENST00000233027 ZNF581Q9P0T4 197 aa11.09□□□□□ -0.63
NEK4-201ENST00000233027 IGLV3-32A0A0A0MS00 114 aa11.09□□□□□ -0.63
NEK4-201ENST00000233027 Q5PR19 223 aa11.09□□□□□ -0.63
NEK4-201ENST00000233027 SAMD13Q5VXD3 122 aa11.09□□□□□ -0.63
NEK4-201ENST00000233027 COLCA1Q6ZS62 124 aa11.09□□□□□ -0.63
NEK4-201ENST00000233027 DMRTC2Q8IXT2 367 aaPredicted RBP11.09□□□□□ -0.63
NEK4-201ENST00000233027 NEU4Q8WWR8 484 aaPredicted RBP11.09□□□□□ -0.63
NEK4-201ENST00000233027 NABP1Q96AH0 204 aa11.09□□□□□ -0.63
NEK4-201ENST00000233027 HEATR5BQ9P2D3 2071 aa11.08□□□□□ -0.64
NEK4-201ENST00000233027 NUP37Q8NFH4 326 aa11.08□□□□□ -0.64
NEK4-201ENST00000233027 IGHV3-64A0A075B6Q5 118 aa11.08□□□□□ -0.64
NEK4-201ENST00000233027 H3BRM9 83 aa11.08□□□□□ -0.64
NEK4-201ENST00000233027 SELLP14151 372 aa11.08□□□□□ -0.64
NEK4-201ENST00000233027 CFHR1Q03591 330 aa11.08□□□□□ -0.64
NEK4-201ENST00000233027 LHFPL1Q86WI0 220 aa11.08□□□□□ -0.64
NEK4-201ENST00000233027 ST20Q9HBF5 79 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms