RNA–Protein interactions for RNA: ENST00000229387.6

RFX4-201, Transcript of regulatory factor X4, humanhuman

TSL 1 (best) BASIC

Gene RFX4, Length 3,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-201ENST00000229387 BMPR1BO00238 502 aa4.71□□□□□ -1.66
RFX4-201ENST00000229387 ASAH2BP0C7U1 165 aa4.71□□□□□ -1.66
RFX4-201ENST00000229387 FAM106CPP0CH98 169 aa4.71□□□□□ -1.66
RFX4-201ENST00000229387 FGF6P10767 208 aa4.71□□□□□ -1.66
RFX4-201ENST00000229387 IFITM1P13164 125 aa4.71□□□□□ -1.66
RFX4-201ENST00000229387 GLRXP35754 106 aa4.71□□□□□ -1.66
RFX4-201ENST00000229387 CLRN1P58418 232 aa4.71□□□□□ -1.66
RFX4-201ENST00000229387 RPS18P62269 152 aaKnown RBP4.71□□□□□ -1.66
RFX4-201ENST00000229387 FHL3Q13643 280 aa4.71□□□□□ -1.66
RFX4-201ENST00000229387 FAM106AQ4KMX7 169 aa4.71□□□□□ -1.66
RFX4-201ENST00000229387 C1QL2Q7Z5L3 287 aa4.71□□□□□ -1.66
RFX4-201ENST00000229387 RPEQ96AT9 228 aa4.71□□□□□ -1.66
RFX4-201ENST00000229387 ZNF501Q96CX3 271 aaPredicted RBP4.71□□□□□ -1.66
RFX4-201ENST00000229387 RAB40CQ96S21 281 aa4.71□□□□□ -1.66
RFX4-201ENST00000229387 SLC39A9Q9NUM3 307 aa4.71□□□□□ -1.66
RFX4-201ENST00000229387 DKK4Q9UBT3 224 aa4.71□□□□□ -1.66
RFX4-201ENST00000229387 THADAQ6YHU6 1953 aa4.71□□□□□ -1.66
RFX4-201ENST00000229387 TMEM262E9PQX1 116 aa4.71□□□□□ -1.66
RFX4-201ENST00000229387 H3BMG7 143 aa4.71□□□□□ -1.66
RFX4-201ENST00000229387 APOA2P02652 100 aa4.71□□□□□ -1.66
RFX4-201ENST00000229387 ORM1P02763 201 aa4.71□□□□□ -1.66
RFX4-201ENST00000229387 C8orf88P0DMB2 117 aa4.71□□□□□ -1.66
RFX4-201ENST00000229387 VSIG8P0DPA2 414 aa4.71□□□□□ -1.66
RFX4-201ENST00000229387 NTF3P20783 257 aa4.71□□□□□ -1.66
RFX4-201ENST00000229387 NPPCP23582 126 aa4.71□□□□□ -1.66
RFX4-201ENST00000229387 G6PCP35575 357 aa4.71□□□□□ -1.66
RFX4-201ENST00000229387 NKX2-1P43699 371 aaPredicted RBP4.71□□□□□ -1.66
RFX4-201ENST00000229387 MYBPHQ13203 477 aa4.71□□□□□ -1.66
RFX4-201ENST00000229387 TRIP6Q15654 476 aaKnown RBP4.71□□□□□ -1.66
RFX4-201ENST00000229387 PRR31Q5SQ13 230 aa4.71□□□□□ -1.66
RFX4-201ENST00000229387 RASL11AQ6T310 242 aa4.71□□□□□ -1.66
RFX4-201ENST00000229387 SH2D6Q7Z4S9 175 aa4.71□□□□□ -1.66
RFX4-201ENST00000229387 SCGB1C1Q8TD33 95 aa4.71□□□□□ -1.66
RFX4-201ENST00000229387 ADAT3Q96EY9 351 aaPredicted RBP4.71□□□□□ -1.66
RFX4-201ENST00000229387 ST6GALNAC5Q9BVH7 336 aa4.71□□□□□ -1.66
RFX4-201ENST00000229387 VSIRQ9H7M9 311 aa4.71□□□□□ -1.66
RFX4-201ENST00000229387 LOC107986453A0A1B0GWG9 222 aa4.7□□□□□ -1.66
RFX4-201ENST00000229387 LILRA5A6NI73 299 aa4.7□□□□□ -1.66
RFX4-201ENST00000229387 E9PLD3 99 aa4.7□□□□□ -1.66
RFX4-201ENST00000229387 J3KT08 172 aa4.7□□□□□ -1.66
RFX4-201ENST00000229387 ANGPTL7O43827 346 aa4.7□□□□□ -1.66
RFX4-201ENST00000229387 HSBP1O75506 76 aa4.7□□□□□ -1.66
RFX4-201ENST00000229387 OR7C1O76099 320 aaPredicted RBP4.7□□□□□ -1.66
RFX4-201ENST00000229387 CSN3P07498 182 aa4.7□□□□□ -1.66
RFX4-201ENST00000229387 GLI4P10075 376 aa4.7□□□□□ -1.66
RFX4-201ENST00000229387 PPIFP30405 207 aaKnown RBP4.7□□□□□ -1.66
RFX4-201ENST00000229387 IGLV3-21P80748 117 aaPredicted RBP4.7□□□□□ -1.66
RFX4-201ENST00000229387 CEACAM16Q2WEN9 425 aa4.7□□□□□ -1.66
RFX4-201ENST00000229387 GAGE13Q4V321 117 aa4.7□□□□□ -1.66
RFX4-201ENST00000229387 MEIG1Q5JSS6 88 aa4.7□□□□□ -1.66
RFX4-201ENST00000229387 ZNF695Q8IW36 515 aa4.7□□□□□ -1.66
RFX4-201ENST00000229387 RBMXL3Q8N7X1 1067 aaKnown RBP4.7□□□□□ -1.66
RFX4-201ENST00000229387 Q8NA96 180 aa4.7□□□□□ -1.66
RFX4-201ENST00000229387 OTOSQ8NHW6 89 aa4.7□□□□□ -1.66
RFX4-201ENST00000229387 GPX7Q96SL4 187 aaPredicted RBP4.7□□□□□ -1.66
RFX4-201ENST00000229387 CDX2Q99626 313 aaPredicted RBP4.7□□□□□ -1.66
RFX4-201ENST00000229387 NAA38Q9BRA0 125 aaKnown RBP4.7□□□□□ -1.66
RFX4-201ENST00000229387 R4GN57 208 aa4.7□□□□□ -1.66
RFX4-201ENST00000229387 CNOT1A5YKK6 2376 aaKnown RBP4.7□□□□□ -1.66
RFX4-201ENST00000229387 PHF3Q92576 2039 aaKnown RBP4.7□□□□□ -1.66
RFX4-201ENST00000229387 CTXND1A0A1B0GTU2 59 aa4.7□□□□□ -1.66
RFX4-201ENST00000229387 FRG2CA6NGY1 282 aa4.7□□□□□ -1.66
RFX4-201ENST00000229387 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.7□□□□□ -1.66
RFX4-201ENST00000229387 APOMO95445 188 aa4.7□□□□□ -1.66
RFX4-201ENST00000229387 IGLV3-19P01714 112 aa4.7□□□□□ -1.66
RFX4-201ENST00000229387 APCSP02743 223 aa4.7□□□□□ -1.66
RFX4-201ENST00000229387 FCGR2BP31994 310 aaPredicted RBP4.7□□□□□ -1.66
RFX4-201ENST00000229387 INSL3P51460 131 aa4.7□□□□□ -1.66
RFX4-201ENST00000229387 FAM120AOSQ5T036 256 aa4.7□□□□□ -1.66
RFX4-201ENST00000229387 UTF1Q5T230 341 aa4.7□□□□□ -1.66
RFX4-201ENST00000229387 FAM19A5Q7Z5A7 132 aaPredicted RBP4.7□□□□□ -1.66
RFX4-201ENST00000229387 ZNF645Q8N7E2 425 aa4.7□□□□□ -1.66
RFX4-201ENST00000229387 ZNRF2Q8NHG8 242 aa4.7□□□□□ -1.66
RFX4-201ENST00000229387 CLDN23Q96B33 292 aa4.7□□□□□ -1.66
RFX4-201ENST00000229387 KCNIP2Q9NS61 270 aa4.7□□□□□ -1.66
RFX4-201ENST00000229387 LOXL2Q9Y4K0 774 aa4.7□□□□□ -1.66
RFX4-201ENST00000229387 IGKV3D-11A0A0A0MRZ8 115 aa4.7□□□□□ -1.66
RFX4-201ENST00000229387 CGB1A6NKQ9 187 aa4.7□□□□□ -1.66
RFX4-201ENST00000229387 EFNA2O43921 213 aa4.7□□□□□ -1.66
RFX4-201ENST00000229387 OR5AL1P0C617 328 aa4.7□□□□□ -1.66
RFX4-201ENST00000229387 ZNF474Q6S9Z5 364 aaPredicted RBP4.7□□□□□ -1.66
RFX4-201ENST00000229387 TMEM178AQ8NBL3 297 aa4.7□□□□□ -1.66
RFX4-201ENST00000229387 WIPF2Q8TF74 440 aaPredicted RBP4.7□□□□□ -1.66
RFX4-201ENST00000229387 ARPC1AQ92747 370 aa4.7□□□□□ -1.66
RFX4-201ENST00000229387 IFI27L2Q9H2X8 130 aa4.7□□□□□ -1.66
RFX4-201ENST00000229387 C5orf63A6NC05 138 aa4.69□□□□□ -1.66
RFX4-201ENST00000229387 MBD3L4A6NDZ8 208 aaPredicted RBP4.69□□□□□ -1.66
RFX4-201ENST00000229387 MBD3L3A6NE82 208 aaPredicted RBP4.69□□□□□ -1.66
RFX4-201ENST00000229387 BGLAPP02818 100 aa4.69□□□□□ -1.66
RFX4-201ENST00000229387 RPL7P18124 248 aaKnown RBP4.69□□□□□ -1.66
RFX4-201ENST00000229387 SNU13P55769 128 aaKnown RBP4.69□□□□□ -1.66
RFX4-201ENST00000229387 SEC61GP60059 68 aa4.69□□□□□ -1.66
RFX4-201ENST00000229387 NMSQ5H8A3 153 aa4.69□□□□□ -1.66
RFX4-201ENST00000229387 RHBDD2Q6NTF9 364 aa4.69□□□□□ -1.66
RFX4-201ENST00000229387 SLC22A24Q8N4F4 322 aa4.69□□□□□ -1.66
RFX4-201ENST00000229387 OR10G7Q8NGN6 311 aa4.69□□□□□ -1.66
RFX4-201ENST00000229387 PHLDA1Q8WV24 401 aaPredicted RBP4.69□□□□□ -1.66
RFX4-201ENST00000229387 RASL10AQ92737 203 aa4.69□□□□□ -1.66
RFX4-201ENST00000229387 ENY2Q9NPA8 101 aa4.69□□□□□ -1.66
RFX4-201ENST00000229387 NBEAQ8NFP9 2946 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 115 ms