RNA–Protein interactions for RNA: ENST00000229265.10

CDCA3-201, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-201ENST00000229265 ONECUT1Q9UBC0 465 aa8.54□□□□□ -1.04
CDCA3-201ENST00000229265 ELOA3CA0A087WX78 387 aaPredicted RBP8.53□□□□□ -1.04
CDCA3-201ENST00000229265 IGHV2-70DA0A0C4DH43 119 aa8.53□□□□□ -1.04
CDCA3-201ENST00000229265 A0A1W2PPI3 338 aa8.53□□□□□ -1.04
CDCA3-201ENST00000229265 H3BQ15 152 aa8.53□□□□□ -1.04
CDCA3-201ENST00000229265 SLC25A17O43808 307 aa8.53□□□□□ -1.04
CDCA3-201ENST00000229265 CD5LO43866 347 aa8.53□□□□□ -1.04
CDCA3-201ENST00000229265 MT-ND4LP03901 98 aa8.53□□□□□ -1.04
CDCA3-201ENST00000229265 LINC00869P0C866 280 aa8.53□□□□□ -1.04
CDCA3-201ENST00000229265 OR13C7P0DN81 318 aa8.53□□□□□ -1.04
CDCA3-201ENST00000229265 FOLR2P14207 255 aa8.53□□□□□ -1.04
CDCA3-201ENST00000229265 AREGP15514 252 aa8.53□□□□□ -1.04
CDCA3-201ENST00000229265 NPBWR1P48145 328 aa8.53□□□□□ -1.04
CDCA3-201ENST00000229265 REG1BP48304 166 aa8.53□□□□□ -1.04
CDCA3-201ENST00000229265 ELLP55199 621 aaPredicted RBP8.53□□□□□ -1.04
CDCA3-201ENST00000229265 LMO4P61968 165 aa8.53□□□□□ -1.04
CDCA3-201ENST00000229265 DIAPH2-AS1Q14236 149 aa8.53□□□□□ -1.04
CDCA3-201ENST00000229265 MRGPRG-AS1Q2M3A8 158 aa8.53□□□□□ -1.04
CDCA3-201ENST00000229265 SPINK9Q5DT21 86 aa8.53□□□□□ -1.04
CDCA3-201ENST00000229265 ZNF562Q6V9R5 426 aa8.53□□□□□ -1.04
CDCA3-201ENST00000229265 PQLC2Q6ZP29 291 aa8.53□□□□□ -1.04
CDCA3-201ENST00000229265 THAP8Q8NA92 274 aa8.53□□□□□ -1.04
CDCA3-201ENST00000229265 TMEM116Q8NCL8 245 aa8.53□□□□□ -1.04
CDCA3-201ENST00000229265 STXBP6Q8NFX7 210 aa8.53□□□□□ -1.04
CDCA3-201ENST00000229265 OR1L4Q8NGR5 311 aa8.53□□□□□ -1.04
CDCA3-201ENST00000229265 C22orf15Q8WYQ4 148 aa8.53□□□□□ -1.04
CDCA3-201ENST00000229265 C1orf159Q96HA4 380 aa8.53□□□□□ -1.04
CDCA3-201ENST00000229265 PFDN5Q99471 154 aa8.53□□□□□ -1.04
CDCA3-201ENST00000229265 MRPL32Q9BYC8 188 aaKnown RBP8.53□□□□□ -1.04
CDCA3-201ENST00000229265 BPESC1Q9GZL8 116 aa8.53□□□□□ -1.04
CDCA3-201ENST00000229265 YAE1D1Q9NRH1 226 aa8.53□□□□□ -1.04
CDCA3-201ENST00000229265 TMEM167BQ9NRX6 74 aa8.53□□□□□ -1.04
CDCA3-201ENST00000229265 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.53□□□□□ -1.049e-7■■■□□ 17.4
CDCA3-201ENST00000229265 CGB1A6NKQ9 187 aa8.52□□□□□ -1.05
CDCA3-201ENST00000229265 TSPAN4O14817 238 aa8.52□□□□□ -1.05
CDCA3-201ENST00000229265 TGOLN2O43493 480 aa8.52□□□□□ -1.05
CDCA3-201ENST00000229265 YIF1AO95070 293 aa8.52□□□□□ -1.05
CDCA3-201ENST00000229265 FABP1P07148 127 aa8.52□□□□□ -1.05
CDCA3-201ENST00000229265 BRS3P32247 399 aa8.52□□□□□ -1.05
CDCA3-201ENST00000229265 WT1-ASQ06250 92 aa8.52□□□□□ -1.05
CDCA3-201ENST00000229265 TMEM241Q24JQ0 296 aa8.52□□□□□ -1.05
CDCA3-201ENST00000229265 HCP5Q6MZN7 132 aa8.52□□□□□ -1.05
CDCA3-201ENST00000229265 FAM122CQ6P4D5 195 aa8.52□□□□□ -1.05
CDCA3-201ENST00000229265 S100A7AQ86SG5 101 aa8.52□□□□□ -1.05
CDCA3-201ENST00000229265 C17orf50Q8WW18 174 aa8.52□□□□□ -1.05
CDCA3-201ENST00000229265 CFHR4Q92496 578 aa8.52□□□□□ -1.05
CDCA3-201ENST00000229265 TMEM68Q96MH6 324 aa8.52□□□□□ -1.05
CDCA3-201ENST00000229265 SIRPDQ9H106 197 aa8.52□□□□□ -1.05
CDCA3-201ENST00000229265 SDF2L1Q9HCN8 221 aa8.52□□□□□ -1.05
CDCA3-201ENST00000229265 RPS10P5Q9NQ39 176 aa8.52□□□□□ -1.05
CDCA3-201ENST00000229265 TECRQ9NZ01 308 aaKnown RBP8.52□□□□□ -1.05
CDCA3-201ENST00000229265 ZNRD1Q9P1U0 126 aa8.52□□□□□ -1.05
CDCA3-201ENST00000229265 METTL1Q9UBP6 276 aaKnown RBP8.52□□□□□ -1.05
CDCA3-201ENST00000229265 IGLC7A0M8Q6 106 aa8.51□□□□□ -1.05
CDCA3-201ENST00000229265 ZFP92A6NM28 416 aa8.51□□□□□ -1.05
CDCA3-201ENST00000229265 M0R036 132 aa8.51□□□□□ -1.05
CDCA3-201ENST00000229265 HMGB3O15347 200 aaKnown RBP8.51□□□□□ -1.05
CDCA3-201ENST00000229265 NBR2O15453 112 aa8.51□□□□□ -1.05
CDCA3-201ENST00000229265 FAM106CPP0CH98 169 aa8.51□□□□□ -1.05
CDCA3-201ENST00000229265 CD81P60033 236 aa8.51□□□□□ -1.05
CDCA3-201ENST00000229265 PLP1P60201 277 aa8.51□□□□□ -1.05
CDCA3-201ENST00000229265 KLK9Q2XQG4 91 aa8.51□□□□□ -1.05
CDCA3-201ENST00000229265 FAM90A2PQ658T7 463 aa8.51□□□□□ -1.05
CDCA3-201ENST00000229265 STPG3Q8N7X2 389 aa8.51□□□□□ -1.05
CDCA3-201ENST00000229265 OR10W1Q8NGF6 305 aa8.51□□□□□ -1.05
CDCA3-201ENST00000229265 RPUSD4Q96CM3 377 aaKnown RBP8.51□□□□□ -1.05
CDCA3-201ENST00000229265 TRGV9Q99603 122 aa8.51□□□□□ -1.05
CDCA3-201ENST00000229265 TCEAL7Q9BRU2 100 aa8.51□□□□□ -1.05
CDCA3-201ENST00000229265 DNAJC4Q9NNZ3 241 aa8.51□□□□□ -1.05
CDCA3-201ENST00000229265 NAT8Q9UHE5 227 aa8.51□□□□□ -1.05
CDCA3-201ENST00000229265 KLK9Q9UKQ9 250 aa8.51□□□□□ -1.05
CDCA3-201ENST00000229265 RNF24Q9Y225 148 aa8.51□□□□□ -1.05
CDCA3-201ENST00000229265 FUT9Q9Y231 359 aa8.51□□□□□ -1.05
CDCA3-201ENST00000229265 F11RQ9Y624 299 aaKnown RBP8.51□□□□□ -1.05
CDCA3-201ENST00000229265 TRAV30A0A087WSZ9 112 aa8.5□□□□□ -1.05
CDCA3-201ENST00000229265 TCRBV4S1A1TA0A5B7 111 aa8.5□□□□□ -1.05
CDCA3-201ENST00000229265 FAM74A7A6NL05 159 aa8.5□□□□□ -1.05
CDCA3-201ENST00000229265 COLCA2A8K830 154 aa8.5□□□□□ -1.05
CDCA3-201ENST00000229265 HAX1O00165 279 aa8.5□□□□□ -1.05
CDCA3-201ENST00000229265 TOX4O94842 621 aa8.5□□□□□ -1.05
CDCA3-201ENST00000229265 OR5G3P0C626 314 aa8.5□□□□□ -1.05
CDCA3-201ENST00000229265 GATA3P23771 443 aa8.5□□□□□ -1.05
CDCA3-201ENST00000229265 PAX8Q06710 450 aa8.5□□□□□ -1.05
CDCA3-201ENST00000229265 LOXL1Q08397 574 aaPredicted RBP8.5□□□□□ -1.05
CDCA3-201ENST00000229265 AWAT1Q58HT5 328 aa8.5□□□□□ -1.05
CDCA3-201ENST00000229265 MIC13Q5XKP0 118 aa8.5□□□□□ -1.05
CDCA3-201ENST00000229265 CYP2G1PQ6ZSU1 146 aa8.5□□□□□ -1.05
CDCA3-201ENST00000229265 SLC16A13Q7RTY0 426 aa8.5□□□□□ -1.05
CDCA3-201ENST00000229265 CYB561D1Q8N8Q1 229 aa8.5□□□□□ -1.05
CDCA3-201ENST00000229265 FAM168AQ92567 244 aa8.5□□□□□ -1.05
CDCA3-201ENST00000229265 BTF3L4Q96K17 158 aa8.5□□□□□ -1.05
CDCA3-201ENST00000229265 PIMREGQ9BSJ6 248 aa8.5□□□□□ -1.05
CDCA3-201ENST00000229265 DOK5Q9P104 306 aa8.5□□□□□ -1.05
CDCA3-201ENST00000229265 PUS1Q9Y606 427 aaKnown RBP eCLIP8.5□□□□□ -1.05
CDCA3-201ENST00000229265 LY96Q9Y6Y9 160 aa8.5□□□□□ -1.05
CDCA3-201ENST00000229265 ZNF727A8MUV8 499 aa8.49□□□□□ -1.05
CDCA3-201ENST00000229265 E7EUB6 86 aa8.49□□□□□ -1.05
CDCA3-201ENST00000229265 TIMM23O14925 209 aa8.49□□□□□ -1.05
CDCA3-201ENST00000229265 C8orf88P0DMB2 117 aa8.49□□□□□ -1.05
CDCA3-201ENST00000229265 COX7A1P24310 79 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms