RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 RPL19P84098 196 aaKnown RBP13.18□□□□□ -0.3
LTBR-201ENST00000228918 DMRTA1Q5VZB9 504 aa13.18□□□□□ -0.3
LTBR-201ENST00000228918 TMEM200BQ69YZ2 307 aa13.18□□□□□ -0.3
LTBR-201ENST00000228918 WDR73Q6P4I2 378 aa13.18□□□□□ -0.3
LTBR-201ENST00000228918 BAGE3Q86Y29 109 aa13.18□□□□□ -0.3
LTBR-201ENST00000228918 BAGE2Q86Y30 109 aa13.18□□□□□ -0.3
LTBR-201ENST00000228918 ZCCHC24Q8N2G6 241 aaKnown RBP13.18□□□□□ -0.3
LTBR-201ENST00000228918 FLYWCH2Q96CP2 140 aaKnown RBP13.18□□□□□ -0.3
LTBR-201ENST00000228918 TRAV5A0A0B4J249 113 aa13.17□□□□□ -0.3
LTBR-201ENST00000228918 A0A1W2PN81 502 aa13.17□□□□□ -0.3
LTBR-201ENST00000228918 CGB1A6NKQ9 187 aa13.17□□□□□ -0.3
LTBR-201ENST00000228918 SSBP2P81877 361 aaPredicted RBP13.17□□□□□ -0.3
LTBR-201ENST00000228918 TMEM136Q6ZRR5 245 aa13.17□□□□□ -0.3
LTBR-201ENST00000228918 HSPB9Q9BQS6 159 aa13.17□□□□□ -0.3
LTBR-201ENST00000228918 NAV3Q8IVL0 2385 aa13.17□□□□□ -0.3
LTBR-201ENST00000228918 WT1-ASQ06250 92 aa13.16□□□□□ -0.3
LTBR-201ENST00000228918 TDRG1Q3Y452 100 aa13.16□□□□□ -0.3
LTBR-201ENST00000228918 COX19Q49B96 90 aa13.16□□□□□ -0.3
LTBR-201ENST00000228918 IBA57Q5T440 356 aaKnown RBP13.16□□□□□ -0.3
LTBR-201ENST00000228918 TPTE2P1Q5T6R2 138 aa13.16□□□□□ -0.3
LTBR-201ENST00000228918 TOMM20LQ6UXN7 152 aa13.16□□□□□ -0.3
LTBR-201ENST00000228918 PDPNQ86YL7 162 aa13.16□□□□□ -0.3
LTBR-201ENST00000228918 OR4C13Q8NGP0 309 aa13.16□□□□□ -0.3
LTBR-201ENST00000228918 OR4A5Q8NH83 315 aa13.16□□□□□ -0.3
LTBR-201ENST00000228918 DNAJC4Q9NNZ3 241 aa13.16□□□□□ -0.3
LTBR-201ENST00000228918 NAT8BQ9UHF3 227 aa13.16□□□□□ -0.3
LTBR-201ENST00000228918 LAMA5O15230 3695 aa13.16□□□□□ -0.3
LTBR-201ENST00000228918 DPRXA6NFQ7 191 aa13.16□□□□□ -0.3
LTBR-201ENST00000228918 SPINK4O60575 86 aa13.16□□□□□ -0.3
LTBR-201ENST00000228918 FAM71F2Q6NXP2 309 aa13.16□□□□□ -0.3
LTBR-201ENST00000228918 WFDC8Q8IUA0 241 aa13.16□□□□□ -0.3
LTBR-201ENST00000228918 OR5AU1Q8NGC0 362 aa13.16□□□□□ -0.3
LTBR-201ENST00000228918 VSTM2AQ8TAG5 236 aa13.16□□□□□ -0.3
LTBR-201ENST00000228918 FNDC4Q9H6D8 234 aaPredicted RBP13.16□□□□□ -0.3
LTBR-201ENST00000228918 GNB4Q9HAV0 340 aa13.16□□□□□ -0.3
LTBR-201ENST00000228918 SMG1Q96Q15 3661 aaKnown RBP13.16□□□□□ -0.3
LTBR-201ENST00000228918 SMIM27A0A1W2PRY6 76 aa13.15□□□□□ -0.3
LTBR-201ENST00000228918 MGST1P10620 155 aaKnown RBP13.15□□□□□ -0.3
LTBR-201ENST00000228918 TCL1AP56279 114 aa13.15□□□□□ -0.3
LTBR-201ENST00000228918 DIAPH2-AS1Q14236 149 aa13.15□□□□□ -0.3
LTBR-201ENST00000228918 C10orf55Q5SWW7 151 aa13.15□□□□□ -0.3
LTBR-201ENST00000228918 OR10X1Q8NGY0 326 aa13.15□□□□□ -0.3
LTBR-201ENST00000228918 ZNF596Q8TC21 504 aa13.15□□□□□ -0.3
LTBR-201ENST00000228918 ZNF430Q9H8G1 570 aaPredicted RBP13.15□□□□□ -0.3
LTBR-201ENST00000228918 CDC42EP3Q9UKI2 254 aa13.15□□□□□ -0.3
LTBR-201ENST00000228918 ARFGEF3Q5TH69 2177 aa13.15□□□□□ -0.3
LTBR-201ENST00000228918 PPIAL4EA0A075B759 164 aa13.15□□□□□ -0.3
LTBR-201ENST00000228918 A0A0G2JNJ9 132 aa13.15□□□□□ -0.3
LTBR-201ENST00000228918 PPIAL4DF5H284 164 aa13.15□□□□□ -0.3
LTBR-201ENST00000228918 TMEM178BH3BS89 294 aa13.15□□□□□ -0.3
LTBR-201ENST00000228918 IGLV2-23P01705 113 aa13.15□□□□□ -0.3
LTBR-201ENST00000228918 PPIAL4FP0DN26 164 aa13.15□□□□□ -0.3
LTBR-201ENST00000228918 SLC35B1P78383 322 aa13.15□□□□□ -0.3
LTBR-201ENST00000228918 LINC00311Q8N616 119 aa13.15□□□□□ -0.3
LTBR-201ENST00000228918 SAP30LQ9HAJ7 183 aa13.15□□□□□ -0.3
LTBR-201ENST00000228918 Q9UFV3 132 aa13.15□□□□□ -0.3
LTBR-201ENST00000228918 PPIAL4AQ9Y536 164 aa13.15□□□□□ -0.3
LTBR-201ENST00000228918 C16orf97H3BN30 126 aa13.14□□□□□ -0.31
LTBR-201ENST00000228918 COX7A2P2O60397 106 aa13.14□□□□□ -0.31
LTBR-201ENST00000228918 AMY1AP04745 511 aa13.14□□□□□ -0.31
LTBR-201ENST00000228918 CDKN1AP38936 164 aa13.14□□□□□ -0.31
LTBR-201ENST00000228918 H1FXQ92522 213 aaKnown RBP13.14□□□□□ -0.31
LTBR-201ENST00000228918 TMEM186Q96B77 213 aa13.14□□□□□ -0.31
LTBR-201ENST00000228918 SAMD10Q9BYL1 202 aa13.14□□□□□ -0.31
LTBR-201ENST00000228918 ZNF355PQ9NSJ1 428 aa13.14□□□□□ -0.31
LTBR-201ENST00000228918 ZFP30Q9Y2G7 519 aa13.14□□□□□ -0.31
LTBR-201ENST00000228918 CEP250Q9BV73 2442 aa13.14□□□□□ -0.31
LTBR-201ENST00000228918 ZNF318Q5VUA4 2279 aa13.14□□□□□ -0.31
LTBR-201ENST00000228918 IGKV1D-37A0A075B6S9 117 aa13.14□□□□□ -0.31
LTBR-201ENST00000228918 TCRBV4S1A1TA0A5B7 111 aa13.14□□□□□ -0.31
LTBR-201ENST00000228918 PYYP10082 97 aa13.14□□□□□ -0.31
LTBR-201ENST00000228918 BSPH1Q075Z2 132 aa13.14□□□□□ -0.31
LTBR-201ENST00000228918 C8orf31Q8N9H6 132 aa13.14□□□□□ -0.31
LTBR-201ENST00000228918 THAP8Q8NA92 274 aa13.14□□□□□ -0.31
LTBR-201ENST00000228918 OR1L4Q8NGR5 311 aa13.14□□□□□ -0.31
LTBR-201ENST00000228918 ST6GALNAC6Q969X2 333 aa13.14□□□□□ -0.31
LTBR-201ENST00000228918 MGAQ8IWI9 3026 aa13.14□□□□□ -0.31
LTBR-201ENST00000228918 TMEM183BQ1AE95 376 aa13.13□□□□□ -0.31
LTBR-201ENST00000228918 OR10J3Q5JRS4 329 aa13.13□□□□□ -0.31
LTBR-201ENST00000228918 C10orf113Q5VZT2 155 aa13.13□□□□□ -0.31
LTBR-201ENST00000228918 LYPD2Q6UXB3 125 aa13.13□□□□□ -0.31
LTBR-201ENST00000228918 PATE2Q6UY27 113 aa13.13□□□□□ -0.31
LTBR-201ENST00000228918 NHLRC2Q8NBF2 726 aa13.13□□□□□ -0.31
LTBR-201ENST00000228918 NPIPB3Q92617 1050 aa13.13□□□□□ -0.31
LTBR-201ENST00000228918 WASHC3Q9Y3C0 194 aa13.13□□□□□ -0.31
LTBR-201ENST00000228918 TNFRSF13BO14836 293 aaPredicted RBP13.13□□□□□ -0.31
LTBR-201ENST00000228918 HLA-DQA1P01909 254 aa13.13□□□□□ -0.31
LTBR-201ENST00000228918 THBDP07204 575 aa13.13□□□□□ -0.31
LTBR-201ENST00000228918 BPIFB3P59826 476 aa13.13□□□□□ -0.31
LTBR-201ENST00000228918 COL5A1-AS1Q5SY13 56 aa13.13□□□□□ -0.31
LTBR-201ENST00000228918 MRPL54Q6P161 138 aaKnown RBP13.13□□□□□ -0.31
LTBR-201ENST00000228918 LINC00479Q96M42 142 aa13.13□□□□□ -0.31
LTBR-201ENST00000228918 PAXXQ9BUH6 204 aa13.13□□□□□ -0.31
LTBR-201ENST00000228918 SERTAD4Q9NUC0 356 aa13.13□□□□□ -0.31
LTBR-201ENST00000228918 MRPL36Q9P0J6 103 aaKnown RBP13.13□□□□□ -0.31
LTBR-201ENST00000228918 ROS1P08922 2347 aa13.12□□□□□ -0.31
LTBR-201ENST00000228918 SIAH2O43255 324 aa13.12□□□□□ -0.31
LTBR-201ENST00000228918 NDUFB3O43676 98 aa13.12□□□□□ -0.31
LTBR-201ENST00000228918 FSTL3O95633 263 aa13.12□□□□□ -0.31
LTBR-201ENST00000228918 COMPP49747 757 aaPredicted RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms