RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 A0A1B0GW64 132 aa11.39□□□□□ -0.59
NFKB1-201ENST00000226574 TWIST1Q15672 202 aa11.39□□□□□ -0.59
NFKB1-201ENST00000226574 TBR1Q16650 682 aa11.39□□□□□ -0.59
NFKB1-201ENST00000226574 MBNL2Q5VZF2 373 aaKnown RBP11.39□□□□□ -0.59
NFKB1-201ENST00000226574 TMEM116Q8NCL8 245 aa11.39□□□□□ -0.59
NFKB1-201ENST00000226574 HSPB8Q9UJY1 196 aa11.39□□□□□ -0.59
NFKB1-201ENST00000226574 CEP295Q9C0D2 2601 aa11.39□□□□□ -0.59
NFKB1-201ENST00000226574 TICRRQ7Z2Z1 1910 aa11.39□□□□□ -0.59
NFKB1-201ENST00000226574 PRUNE2Q8WUY3 3088 aa11.39□□□□□ -0.59
NFKB1-201ENST00000226574 KBTBD11-OT1A0A1B0GTJ5 212 aa11.39□□□□□ -0.59
NFKB1-201ENST00000226574 C15orf62A8K5M9 175 aa11.39□□□□□ -0.59
NFKB1-201ENST00000226574 AHRRA9YTQ3 701 aa11.39□□□□□ -0.59
NFKB1-201ENST00000226574 LYNX1G3V0Z9 82 aa11.39□□□□□ -0.59
NFKB1-201ENST00000226574 CD3EP07766 207 aa11.39□□□□□ -0.59
NFKB1-201ENST00000226574 LYNX1P0DP58 116 aa11.39□□□□□ -0.59
NFKB1-201ENST00000226574 HTN1P15515 57 aa11.39□□□□□ -0.59
NFKB1-201ENST00000226574 SETD2Q9BYW2 2564 aaPredicted RBP11.39□□□□□ -0.59
NFKB1-201ENST00000226574 GAGE10A6NGK3 116 aa11.39□□□□□ -0.59
NFKB1-201ENST00000226574 PEX7O00628 323 aa11.39□□□□□ -0.59
NFKB1-201ENST00000226574 CKS2P33552 79 aa11.39□□□□□ -0.59
NFKB1-201ENST00000226574 KHDC1LQ5JSQ8 128 aa11.39□□□□□ -0.59
NFKB1-201ENST00000226574 UNQ5815/PRO19632Q6UWF5 114 aa11.39□□□□□ -0.59
NFKB1-201ENST00000226574 STAG3L2P0CL84 134 aa11.38□□□□□ -0.59
NFKB1-201ENST00000226574 STAG3L3P0CL85 134 aa11.38□□□□□ -0.59
NFKB1-201ENST00000226574 RNFT1Q5M7Z0 435 aa11.38□□□□□ -0.59
NFKB1-201ENST00000226574 ASCL4Q6XD76 172 aa11.38□□□□□ -0.59
NFKB1-201ENST00000226574 ZNF841Q6ZN19 808 aa11.38□□□□□ -0.59
NFKB1-201ENST00000226574 TMEM70Q9BUB7 260 aa11.38□□□□□ -0.59
NFKB1-201ENST00000226574 PRDM13Q9H4Q3 707 aa11.38□□□□□ -0.59
NFKB1-201ENST00000226574 ELOVL5Q9NYP7 299 aa11.38□□□□□ -0.59
NFKB1-201ENST00000226574 SONP18583 2426 aaKnown RBP11.38□□□□□ -0.59
NFKB1-201ENST00000226574 IGKV3D-15A0A087WSY6 115 aa11.38□□□□□ -0.59
NFKB1-201ENST00000226574 MLNRO43193 412 aa11.38□□□□□ -0.59
NFKB1-201ENST00000226574 BTF3P20290 206 aaKnown RBP11.38□□□□□ -0.59
NFKB1-201ENST00000226574 GCSHP23434 173 aa11.38□□□□□ -0.59
NFKB1-201ENST00000226574 TMEM144Q7Z5S9 345 aa11.38□□□□□ -0.59
NFKB1-201ENST00000226574 NAA38Q9BRA0 125 aaKnown RBP11.38□□□□□ -0.59
NFKB1-201ENST00000226574 A8MWP6 167 aa11.38□□□□□ -0.59
NFKB1-201ENST00000226574 NTN3O00634 580 aaPredicted RBP11.38□□□□□ -0.59
NFKB1-201ENST00000226574 GLRXP35754 106 aa11.38□□□□□ -0.59
NFKB1-201ENST00000226574 NUTF2P61970 127 aaKnown RBP11.38□□□□□ -0.59
NFKB1-201ENST00000226574 CD177Q8N6Q3 437 aa11.38□□□□□ -0.59
NFKB1-201ENST00000226574 IL4P05112 153 aa11.37□□□□□ -0.59
NFKB1-201ENST00000226574 ZNF138P52744 262 aa11.37□□□□□ -0.59
NFKB1-201ENST00000226574 BPTFQ12830 3046 aa11.37□□□□□ -0.59
NFKB1-201ENST00000226574 SNHG12Q9BXW3 62 aa11.37□□□□□ -0.59
NFKB1-201ENST00000226574 AP5S1Q9NUS5 200 aa11.37□□□□□ -0.59
NFKB1-201ENST00000226574 IGHV3-66A0A0C4DH42 116 aa11.37□□□□□ -0.59
NFKB1-201ENST00000226574 ZNF324O75467 553 aaPredicted RBP11.37□□□□□ -0.59
NFKB1-201ENST00000226574 CDKN1AP38936 164 aa11.37□□□□□ -0.59
NFKB1-201ENST00000226574 DMRTC2Q8IXT2 367 aaPredicted RBP11.37□□□□□ -0.59
NFKB1-201ENST00000226574 THYN1Q9P016 225 aa11.37□□□□□ -0.59
NFKB1-201ENST00000226574 OR52E5Q8NH55 327 aa11.36□□□□□ -0.59
NFKB1-201ENST00000226574 C15orf61A6NNL5 157 aa11.36□□□□□ -0.59
NFKB1-201ENST00000226574 HBBP68871 147 aa11.36□□□□□ -0.59
NFKB1-201ENST00000226574 FXYD7P58549 80 aa11.36□□□□□ -0.59
NFKB1-201ENST00000226574 SCNM1Q9BWG6 230 aa11.36□□□□□ -0.59
NFKB1-201ENST00000226574 TRAV8-1A0A0A6YYK1 113 aa11.35□□□□□ -0.59
NFKB1-201ENST00000226574 TMEM189A5PLL7 270 aa11.35□□□□□ -0.59
NFKB1-201ENST00000226574 SCGB1C2P0DMR2 95 aa11.35□□□□□ -0.59
NFKB1-201ENST00000226574 C19orf35Q6ZS72 473 aa11.35□□□□□ -0.59
NFKB1-201ENST00000226574 SLC25A33Q9BSK2 321 aa11.35□□□□□ -0.59
NFKB1-201ENST00000226574 MRPL37Q9BZE1 423 aaKnown RBP11.35□□□□□ -0.59
NFKB1-201ENST00000226574 IGF2RP11717 2491 aa11.35□□□□□ -0.59
NFKB1-201ENST00000226574 IGKV1-16P04430 117 aa11.35□□□□□ -0.59
NFKB1-201ENST00000226574 SCGB1D4Q6XE38 83 aa11.35□□□□□ -0.59
NFKB1-201ENST00000226574 FOXL2NBQ6ZUU3 175 aa11.35□□□□□ -0.59
NFKB1-201ENST00000226574 KLF2Q9Y5W3 355 aaPredicted RBP11.35□□□□□ -0.59
NFKB1-201ENST00000226574 KIF26AQ9ULI4 1882 aaPredicted RBP11.35□□□□□ -0.59
NFKB1-201ENST00000226574 GFRA3O60609 400 aa11.35□□□□□ -0.59
NFKB1-201ENST00000226574 HLA-DRB1P01911 266 aa11.35□□□□□ -0.59
NFKB1-201ENST00000226574 C1orf194Q5T5A4 169 aa11.35□□□□□ -0.59
NFKB1-201ENST00000226574 TMEM136Q6ZRR5 245 aa11.35□□□□□ -0.59
NFKB1-201ENST00000226574 ARL6IP6Q8N6S5 226 aa11.35□□□□□ -0.59
NFKB1-201ENST00000226574 ETV2O00321 342 aaPredicted RBP11.35□□□□□ -0.59
NFKB1-201ENST00000226574 CA7P43166 264 aa11.35□□□□□ -0.59
NFKB1-201ENST00000226574 C1orf185Q5T7R7 199 aa11.35□□□□□ -0.59
NFKB1-201ENST00000226574 LURAP1LQ8IV03 231 aa11.35□□□□□ -0.59
NFKB1-201ENST00000226574 PNKDQ8N490 385 aa11.35□□□□□ -0.59
NFKB1-201ENST00000226574 CFAP54Q96N23 3096 aa11.34□□□□□ -0.59
NFKB1-201ENST00000226574 IGHV1-18A0A0C4DH31 117 aa11.34□□□□□ -0.59
NFKB1-201ENST00000226574 K7ERU9 68 aa11.34□□□□□ -0.59
NFKB1-201ENST00000226574 APOHP02749 345 aaPredicted RBP11.34□□□□□ -0.59
NFKB1-201ENST00000226574 SP9P0CG40 484 aa11.34□□□□□ -0.59
NFKB1-201ENST00000226574 DLX1P56177 255 aa11.34□□□□□ -0.59
NFKB1-201ENST00000226574 WDR86Q86TI4 376 aa11.34□□□□□ -0.59
NFKB1-201ENST00000226574 LSM4Q9Y4Z0 139 aaKnown RBP11.34□□□□□ -0.59
NFKB1-201ENST00000226574 ZNF207O43670 478 aaKnown RBP11.34□□□□□ -0.59
NFKB1-201ENST00000226574 YPEL1O60688 119 aa11.34□□□□□ -0.59
NFKB1-201ENST00000226574 RPL7P18124 248 aaKnown RBP11.34□□□□□ -0.59
NFKB1-201ENST00000226574 MC5RP33032 325 aa11.34□□□□□ -0.59
NFKB1-201ENST00000226574 ACTL10Q5JWF8 245 aa11.34□□□□□ -0.59
NFKB1-201ENST00000226574 COLCA1Q6ZS62 124 aa11.34□□□□□ -0.59
NFKB1-201ENST00000226574 FAM90A1Q86YD7 464 aa11.34□□□□□ -0.59
NFKB1-201ENST00000226574 RAB1CQ92928 201 aa11.34□□□□□ -0.59
NFKB1-201ENST00000226574 YPEL2Q96QA6 119 aa11.34□□□□□ -0.59
NFKB1-201ENST00000226574 POLR3KQ9Y2Y1 108 aaPredicted RBP11.34□□□□□ -0.59
NFKB1-201ENST00000226574 FOXI3A8MTJ6 420 aaPredicted RBP11.34□□□□□ -0.59
NFKB1-201ENST00000226574 C12orf54Q6X4T0 127 aa11.34□□□□□ -0.59
NFKB1-201ENST00000226574 OR4A5Q8NH83 315 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms