RNA–Protein interactions for RNA: ENST00000225983.10

HDAC5-201, Transcript of histone deacetylase 5, humanhuman

APPRIS P3 TSL 5 BASIC

Gene HDAC5, Length 5,326 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-201ENST00000225983 HIST2H2BEQ16778 126 aa13.41□□□□□ -0.26
HDAC5-201ENST00000225983 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.41□□□□□ -0.26
HDAC5-201ENST00000225983 OCC1Q8TAD7 63 aa13.41□□□□□ -0.26
HDAC5-201ENST00000225983 HIST1H2BHQ93079 126 aa13.41□□□□□ -0.26
HDAC5-201ENST00000225983 HIST1H2BNQ99877 126 aa13.41□□□□□ -0.26
HDAC5-201ENST00000225983 HIST1H2BMQ99879 126 aa13.41□□□□□ -0.26
HDAC5-201ENST00000225983 WDR83OSQ9Y284 106 aa13.41□□□□□ -0.26
HDAC5-201ENST00000225983 MPDZO75970 2070 aa13.41□□□□□ -0.26
HDAC5-201ENST00000225983 IGHV3-11P01762 117 aa13.41□□□□□ -0.26
HDAC5-201ENST00000225983 KIR2DL4Q99706 377 aa13.4□□□□□ -0.26
HDAC5-201ENST00000225983 A1L4Q6 167 aa13.4□□□□□ -0.26
HDAC5-201ENST00000225983 TSPOP30536 169 aa13.4□□□□□ -0.26
HDAC5-201ENST00000225983 TMEM170AQ8WVE7 144 aa13.4□□□□□ -0.26
HDAC5-201ENST00000225983 TRAV8-6A0A0B4J262 113 aa13.4□□□□□ -0.26
HDAC5-201ENST00000225983 PLP1P60201 277 aa13.4□□□□□ -0.26
HDAC5-201ENST00000225983 CD69Q07108 199 aa13.4□□□□□ -0.26
HDAC5-201ENST00000225983 LINC00587B1AMM8 73 aa13.4□□□□□ -0.26
HDAC5-201ENST00000225983 TREML4Q6UXN2 200 aa13.4□□□□□ -0.26
HDAC5-201ENST00000225983 THADAQ6YHU6 1953 aa13.4□□□□□ -0.27
HDAC5-201ENST00000225983 IGKV1-5P01602 117 aa13.39□□□□□ -0.27
HDAC5-201ENST00000225983 RSPO3Q9BXY4 272 aaPredicted RBP13.39□□□□□ -0.27
HDAC5-201ENST00000225983 PLAURQ03405 335 aa13.39□□□□□ -0.27
HDAC5-201ENST00000225983 C10orf55Q5SWW7 151 aa13.39□□□□□ -0.27
HDAC5-201ENST00000225983 MBD3L1Q8WWY6 194 aa13.39□□□□□ -0.27
HDAC5-201ENST00000225983 REG4Q9BYZ8 158 aa13.39□□□□□ -0.27
HDAC5-201ENST00000225983 TRAV5A0A0B4J249 113 aa13.39□□□□□ -0.27
HDAC5-201ENST00000225983 SRRM5B3KS81 715 aa13.39□□□□□ -0.27
HDAC5-201ENST00000225983 SRSF7Q16629 238 aaKnown RBP eCLIP13.39□□□□□ -0.27
HDAC5-201ENST00000225983 CD177Q8N6Q3 437 aa13.39□□□□□ -0.27
HDAC5-201ENST00000225983 TCRBV4S1A1TA0A5B7 111 aa13.39□□□□□ -0.27
HDAC5-201ENST00000225983 B3GALT5-AS1P59052 145 aa13.39□□□□□ -0.27
HDAC5-201ENST00000225983 NMSQ5H8A3 153 aa13.38□□□□□ -0.27
HDAC5-201ENST00000225983 RNASE6Q93091 150 aaKnown RBP13.38□□□□□ -0.27
HDAC5-201ENST00000225983 AKAP6Q13023 2319 aa13.38□□□□□ -0.27
HDAC5-201ENST00000225983 E9PLN8 166 aa13.38□□□□□ -0.27
HDAC5-201ENST00000225983 SMAD7O15105 426 aaKnown RBP13.38□□□□□ -0.27
HDAC5-201ENST00000225983 FAM168AQ92567 244 aa13.38□□□□□ -0.27
HDAC5-201ENST00000225983 TRAV9-1A0A075B6T8 112 aa13.38□□□□□ -0.27
HDAC5-201ENST00000225983 CEACAM4O75871 244 aa13.38□□□□□ -0.27
HDAC5-201ENST00000225983 CXCL1P09341 107 aa13.38□□□□□ -0.27
HDAC5-201ENST00000225983 HEPN1Q6WQI6 88 aa13.38□□□□□ -0.27
HDAC5-201ENST00000225983 CIARTQ8N365 385 aaPredicted RBP13.38□□□□□ -0.27
HDAC5-201ENST00000225983 OTORQ9NRC9 128 aa13.38□□□□□ -0.27
HDAC5-201ENST00000225983 IGKV3OR2-268A0A0C4DH90 116 aa13.38□□□□□ -0.27
HDAC5-201ENST00000225983 CA1P00915 261 aaPredicted RBP13.38□□□□□ -0.27
HDAC5-201ENST00000225983 SPATA31B1PQ5VZV4 182 aa13.38□□□□□ -0.27
HDAC5-201ENST00000225983 C7orf69Q9H7B7 122 aa13.38□□□□□ -0.27
HDAC5-201ENST00000225983 FNDC1Q4ZHG4 1894 aaPredicted RBP13.38□□□□□ -0.27
HDAC5-201ENST00000225983 ASIPP42127 132 aa13.37□□□□□ -0.27
HDAC5-201ENST00000225983 TMEM42Q69YG0 159 aa13.37□□□□□ -0.27
HDAC5-201ENST00000225983 KIR3DL3Q8N743 410 aa13.37□□□□□ -0.27
HDAC5-201ENST00000225983 EPDR1Q9UM22 224 aa13.37□□□□□ -0.27
HDAC5-201ENST00000225983 TRAV3A0A0B4J244 114 aa13.37□□□□□ -0.27
HDAC5-201ENST00000225983 SMAGPQ0VAQ4 97 aa13.37□□□□□ -0.27
HDAC5-201ENST00000225983 FER1L6-AS1Q8NA97 138 aa13.37□□□□□ -0.27
HDAC5-201ENST00000225983 PLSCR4Q9NRQ2 329 aa13.37□□□□□ -0.27
HDAC5-201ENST00000225983 BMPERQ8N8U9 685 aa13.37□□□□□ -0.27
HDAC5-201ENST00000225983 RNF125Q96EQ8 232 aa13.37□□□□□ -0.27
HDAC5-201ENST00000225983 NRN1Q9NPD7 142 aa13.37□□□□□ -0.27
HDAC5-201ENST00000225983 TIMM23O14925 209 aa13.37□□□□□ -0.27
HDAC5-201ENST00000225983 LINC00205P59089 165 aa13.37□□□□□ -0.27
HDAC5-201ENST00000225983 SRSF6Q13247 344 aaKnown RBP13.37□□□□□ -0.27
HDAC5-201ENST00000225983 COLCA2A8K830 154 aa13.37□□□□□ -0.27
HDAC5-201ENST00000225983 WISP1O95388 367 aa13.37□□□□□ -0.27
HDAC5-201ENST00000225983 ZNF600Q6ZNG1 722 aa13.37□□□□□ -0.27
HDAC5-201ENST00000225983 CLDN16Q9Y5I7 305 aa13.36□□□□□ -0.27
HDAC5-201ENST00000225983 TEX38Q6PEX7 206 aa13.36□□□□□ -0.27
HDAC5-201ENST00000225983 GLRX5Q86SX6 157 aa13.36□□□□□ -0.27
HDAC5-201ENST00000225983 PMCHL2Q9BQD1 86 aa13.36□□□□□ -0.27
HDAC5-201ENST00000225983 MYLKQ15746 1914 aa13.36□□□□□ -0.27
HDAC5-201ENST00000225983 CSRP1P21291 193 aaKnown RBP13.36□□□□□ -0.27
HDAC5-201ENST00000225983 RNASE4P34096 147 aaKnown RBP13.36□□□□□ -0.27
HDAC5-201ENST00000225983 GGTLC1Q9BX51 225 aa13.36□□□□□ -0.27
HDAC5-201ENST00000225983 RPUSD1Q9UJJ7 312 aaKnown RBP13.36□□□□□ -0.27
HDAC5-201ENST00000225983 SOX21Q9Y651 276 aaPredicted RBP13.36□□□□□ -0.27
HDAC5-201ENST00000225983 FAM90A9PA6NNJ1 464 aa13.35□□□□□ -0.27
HDAC5-201ENST00000225983 OR11H12B2RN74 326 aa13.35□□□□□ -0.27
HDAC5-201ENST00000225983 MLNRO43193 412 aa13.35□□□□□ -0.27
HDAC5-201ENST00000225983 ADIPOQQ15848 244 aa13.35□□□□□ -0.27
HDAC5-201ENST00000225983 GFI1BQ5VTD9 330 aa13.35□□□□□ -0.27
HDAC5-201ENST00000225983 OR11H1Q8NG94 326 aa13.35□□□□□ -0.27
HDAC5-201ENST00000225983 OR11H2Q8NH07 326 aa13.35□□□□□ -0.27
HDAC5-201ENST00000225983 FOXC2Q99958 501 aa13.35□□□□□ -0.27
HDAC5-201ENST00000225983 A0A1W2PRE2 83 aa13.35□□□□□ -0.27
HDAC5-201ENST00000225983 COX6CP09669 75 aa13.35□□□□□ -0.27
HDAC5-201ENST00000225983 TMEM170BQ5T4T1 132 aa13.35□□□□□ -0.27
HDAC5-201ENST00000225983 CYB5R2Q6BCY4 276 aa13.35□□□□□ -0.27
HDAC5-201ENST00000225983 RPP25LQ8N5L8 163 aaKnown RBP13.35□□□□□ -0.27
HDAC5-201ENST00000225983 MYOD1P15172 320 aa13.35□□□□□ -0.27
HDAC5-201ENST00000225983 FAM71F2Q6NXP2 309 aa13.35□□□□□ -0.27
HDAC5-201ENST00000225983 SPACA3Q8IXA5 215 aa13.35□□□□□ -0.27
HDAC5-201ENST00000225983 PRR31Q5SQ13 230 aa13.34□□□□□ -0.27
HDAC5-201ENST00000225983 ORMDL3Q8N138 153 aa13.34□□□□□ -0.27
HDAC5-201ENST00000225983 MDS2Q8NDY4 140 aa13.34□□□□□ -0.27
HDAC5-201ENST00000225983 GLMPQ8WWB7 406 aa13.34□□□□□ -0.27
HDAC5-201ENST00000225983 LINC00473A8K010 186 aa13.34□□□□□ -0.27
HDAC5-201ENST00000225983 TIMP3P35625 211 aa13.34□□□□□ -0.27
HDAC5-201ENST00000225983 DERL1Q9BUN8 251 aa13.34□□□□□ -0.27
HDAC5-201ENST00000225983 OSTCQ9NRP0 149 aa13.34□□□□□ -0.27
HDAC5-201ENST00000225983 POLEQ07864 2286 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms