RNA–Protein interactions for RNA: ENST00000225441.11

RUNDC3A-201, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-201ENST00000225441 MYOD1P15172 320 aa20.16■□□□□ 0.82
RUNDC3A-201ENST00000225441 RAB4BP61018 213 aa20.16■□□□□ 0.82
RUNDC3A-201ENST00000225441 RANP62826 216 aaKnown RBP20.16■□□□□ 0.82
RUNDC3A-201ENST00000225441 Q0VG73 95 aa20.16■□□□□ 0.82
RUNDC3A-201ENST00000225441 HLA-DRB5Q30154 266 aa20.16■□□□□ 0.82
RUNDC3A-201ENST00000225441 MMD2Q8IY49 270 aa20.16■□□□□ 0.82
RUNDC3A-201ENST00000225441 FLYWCH2Q96CP2 140 aaKnown RBP20.16■□□□□ 0.82
RUNDC3A-201ENST00000225441 HARBI1Q96MB7 349 aa20.16■□□□□ 0.82
RUNDC3A-201ENST00000225441 IGKV1OR2-108A0A075B7D4 117 aa20.16■□□□□ 0.82
RUNDC3A-201ENST00000225441 B9A039 149 aa20.16■□□□□ 0.82
RUNDC3A-201ENST00000225441 ISLRO14498 428 aa20.16■□□□□ 0.82
RUNDC3A-201ENST00000225441 RNF224P0DH78 156 aa20.16■□□□□ 0.82
RUNDC3A-201ENST00000225441 ERVFC1-1P60608 527 aa20.16■□□□□ 0.82
RUNDC3A-201ENST00000225441 OR4C13Q8NGP0 309 aa20.16■□□□□ 0.82
RUNDC3A-201ENST00000225441 MRPL20Q9BYC9 149 aaKnown RBP20.16■□□□□ 0.82
RUNDC3A-201ENST00000225441 ACTL6BO94805 426 aa20.15■□□□□ 0.82
RUNDC3A-201ENST00000225441 TPPP2P59282 170 aa20.15■□□□□ 0.82
RUNDC3A-201ENST00000225441 TAS2R60P59551 318 aa20.15■□□□□ 0.82
RUNDC3A-201ENST00000225441 SSTP61278 116 aa20.15■□□□□ 0.82
RUNDC3A-201ENST00000225441 CENPWQ5EE01 88 aa20.15■□□□□ 0.82
RUNDC3A-201ENST00000225441 OR1L4Q8NGR5 311 aa20.15■□□□□ 0.82
RUNDC3A-201ENST00000225441 CMTM2Q8TAZ6 248 aa20.15■□□□□ 0.82
RUNDC3A-201ENST00000225441 ZNF503Q96F45 646 aa20.15■□□□□ 0.82
RUNDC3A-201ENST00000225441 C2orf88Q9BSF0 95 aa20.15■□□□□ 0.82
RUNDC3A-201ENST00000225441 DYSFO75923 2080 aa20.14■□□□□ 0.81
RUNDC3A-201ENST00000225441 PPIAL4EA0A075B759 164 aa20.14■□□□□ 0.81
RUNDC3A-201ENST00000225441 PPIAL4DF5H284 164 aa20.14■□□□□ 0.81
RUNDC3A-201ENST00000225441 PPIAL4FP0DN26 164 aa20.14■□□□□ 0.81
RUNDC3A-201ENST00000225441 PRSS8Q16651 343 aa20.14■□□□□ 0.81
RUNDC3A-201ENST00000225441 MRPL18Q9H0U6 180 aaKnown RBP20.14■□□□□ 0.81
RUNDC3A-201ENST00000225441 PPIAL4AQ9Y536 164 aa20.14■□□□□ 0.81
RUNDC3A-201ENST00000225441 SPTBN1Q01082 2364 aaKnown RBP20.14■□□□□ 0.81
RUNDC3A-201ENST00000225441 OR7C2O60412 319 aa20.13■□□□□ 0.81
RUNDC3A-201ENST00000225441 ZNF137PP52743 207 aa20.13■□□□□ 0.81
RUNDC3A-201ENST00000225441 OR1L6Q8NGR2 347 aa20.13■□□□□ 0.81
RUNDC3A-201ENST00000225441 MS4A10Q96PG2 267 aa20.13■□□□□ 0.81
RUNDC3A-201ENST00000225441 DNAJC4Q9NNZ3 241 aa20.13■□□□□ 0.81
RUNDC3A-201ENST00000225441 DYNLRB1Q9NP97 96 aa20.13■□□□□ 0.81
RUNDC3A-201ENST00000225441 TMEM178BH3BS89 294 aa20.13■□□□□ 0.81
RUNDC3A-201ENST00000225441 TNFRSF13BO14836 293 aaPredicted RBP20.13■□□□□ 0.81
RUNDC3A-201ENST00000225441 CRISP2P16562 243 aa20.13■□□□□ 0.81
RUNDC3A-201ENST00000225441 CRYBB3P26998 211 aa20.13■□□□□ 0.81
RUNDC3A-201ENST00000225441 PPOXP50336 477 aa20.13■□□□□ 0.81
RUNDC3A-201ENST00000225441 MUC15Q8N387 334 aa20.13■□□□□ 0.81
RUNDC3A-201ENST00000225441 PSMB11A5LHX3 300 aa20.12■□□□□ 0.81
RUNDC3A-201ENST00000225441 CX3CL1P78423 397 aa20.12■□□□□ 0.81
RUNDC3A-201ENST00000225441 TMEM200BQ69YZ2 307 aa20.12■□□□□ 0.81
RUNDC3A-201ENST00000225441 RALYQ9UKM9 306 aaKnown RBP20.12■□□□□ 0.81
RUNDC3A-201ENST00000225441 NDUFB3O43676 98 aa20.11■□□□□ 0.81
RUNDC3A-201ENST00000225441 HNF1AP20823 631 aa20.11■□□□□ 0.81
RUNDC3A-201ENST00000225441 MC5RP33032 325 aa20.11■□□□□ 0.81
RUNDC3A-201ENST00000225441 CCL8P80075 99 aa20.11■□□□□ 0.81
RUNDC3A-201ENST00000225441 LRRC10Q5BKY1 277 aa20.11■□□□□ 0.81
RUNDC3A-201ENST00000225441 ZNF600Q6ZNG1 722 aa20.11■□□□□ 0.81
RUNDC3A-201ENST00000225441 ZCCHC24Q8N2G6 241 aaKnown RBP20.11■□□□□ 0.81
RUNDC3A-201ENST00000225441 TMEM256Q8N2U0 113 aa20.11■□□□□ 0.81
RUNDC3A-201ENST00000225441 NAGKQ9UJ70 344 aa20.11■□□□□ 0.81
RUNDC3A-201ENST00000225441 SLC17A3O00476 420 aa20.11■□□□□ 0.81
RUNDC3A-201ENST00000225441 C1orf194Q5T5A4 169 aa20.11■□□□□ 0.81
RUNDC3A-201ENST00000225441 THAP8Q8NA92 274 aa20.11■□□□□ 0.81
RUNDC3A-201ENST00000225441 OR9G1Q8NH87 305 aa20.11■□□□□ 0.81
RUNDC3A-201ENST00000225441 KAAG1Q9UBP8 84 aa20.11■□□□□ 0.81
RUNDC3A-201ENST00000225441 WASHC3Q9Y3C0 194 aa20.11■□□□□ 0.81
RUNDC3A-201ENST00000225441 FCN1O00602 326 aa20.1■□□□□ 0.81
RUNDC3A-201ENST00000225441 CBLN1P23435 193 aa20.1■□□□□ 0.81
RUNDC3A-201ENST00000225441 ZNF430Q9H8G1 570 aaPredicted RBP20.1■□□□□ 0.81
RUNDC3A-201ENST00000225441 SAP30LQ9HAJ7 183 aa20.1■□□□□ 0.81
RUNDC3A-201ENST00000225441 CDC42EP3Q9UKI2 254 aa20.1■□□□□ 0.81
RUNDC3A-201ENST00000225441 GGTLC3B5MD39 225 aa20.09■□□□□ 0.81
RUNDC3A-201ENST00000225441 SCGB1D1O95968 90 aa20.09■□□□□ 0.81
RUNDC3A-201ENST00000225441 BPIFB3P59826 476 aa20.09■□□□□ 0.81
RUNDC3A-201ENST00000225441 SRSF1Q07955 248 aaKnown RBP eCLIP20.09■□□□□ 0.81
RUNDC3A-201ENST00000225441 OR10X1Q8NGY0 326 aa20.09■□□□□ 0.81
RUNDC3A-201ENST00000225441 ST6GALNAC6Q969X2 333 aa20.09■□□□□ 0.81
RUNDC3A-201ENST00000225441 FAM167A-AS1Q96KT0 104 aa20.09■□□□□ 0.81
RUNDC3A-201ENST00000225441 IGF2BP2-AS1Q96M15 143 aa20.09■□□□□ 0.81
RUNDC3A-201ENST00000225441 ICE1Q9Y2F5 2266 aa20.09■□□□□ 0.81
RUNDC3A-201ENST00000225441 ROS1P08922 2347 aa20.09■□□□□ 0.81
RUNDC3A-201ENST00000225441 VMA21Q3ZAQ7 101 aa20.09■□□□□ 0.81
RUNDC3A-201ENST00000225441 MOB3BQ86TA1 216 aa20.09■□□□□ 0.81
RUNDC3A-201ENST00000225441 DCAF16Q9NXF7 216 aa20.09■□□□□ 0.81
RUNDC3A-201ENST00000225441 LGALS7P47929 136 aa20.08■□□□□ 0.8
RUNDC3A-201ENST00000225441 ETFRF1Q6IPR1 90 aa20.08■□□□□ 0.8
RUNDC3A-201ENST00000225441 RASL11AQ6T310 242 aa20.08■□□□□ 0.8
RUNDC3A-201ENST00000225441 OR10W1Q8NGF6 305 aa20.08■□□□□ 0.8
RUNDC3A-201ENST00000225441 TMEM106BQ9NUM4 274 aa20.08■□□□□ 0.8
RUNDC3A-201ENST00000225441 DOPEY1Q5JWR5 2465 aa20.08■□□□□ 0.8
RUNDC3A-201ENST00000225441 TCRBV4S1A1TA0A5B7 111 aa20.07■□□□□ 0.8
RUNDC3A-201ENST00000225441 A6NNC1 897 aa20.07■□□□□ 0.8
RUNDC3A-201ENST00000225441 UBR5O95071 2799 aaPredicted RBP20.07■□□□□ 0.8
RUNDC3A-201ENST00000225441 SUMO1P63165 101 aaKnown RBP20.07■□□□□ 0.8
RUNDC3A-201ENST00000225441 STXBP6Q8NFX7 210 aa20.07■□□□□ 0.8
RUNDC3A-201ENST00000225441 SLC25A2Q9BXI2 301 aa20.07■□□□□ 0.8
RUNDC3A-201ENST00000225441 FLNCQ14315 2725 aa20.07■□□□□ 0.8
RUNDC3A-201ENST00000225441 KIR2DL5BA0A0G2JN68 375 aa20.06■□□□□ 0.8
RUNDC3A-201ENST00000225441 KIR2DL5BA0A0G2JPC4 375 aa20.06■□□□□ 0.8
RUNDC3A-201ENST00000225441 SMIM27A0A1W2PRY6 76 aa20.06■□□□□ 0.8
RUNDC3A-201ENST00000225441 SNURFLB1AK76 121 aa20.06■□□□□ 0.8
RUNDC3A-201ENST00000225441 IER3P46695 156 aa20.06■□□□□ 0.8
RUNDC3A-201ENST00000225441 OR10J3Q5JRS4 329 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms