RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 NDUFA4O00483 81 aa9.59□□□□□ -0.87
LSM5-201ENST00000223084 NUPL2O15504 423 aaKnown RBP9.59□□□□□ -0.87
LSM5-201ENST00000223084 ZNF207O43670 478 aaKnown RBP9.59□□□□□ -0.87
LSM5-201ENST00000223084 GNG7O60262 68 aa9.59□□□□□ -0.87
LSM5-201ENST00000223084 FCGR2BP31994 310 aaPredicted RBP9.59□□□□□ -0.87
LSM5-201ENST00000223084 OPRK1P41145 380 aa9.59□□□□□ -0.87
LSM5-201ENST00000223084 IFITM3Q01628 133 aa9.59□□□□□ -0.87
LSM5-201ENST00000223084 C2orf83Q53S99 150 aa9.59□□□□□ -0.87
LSM5-201ENST00000223084 UXS1Q8NBZ7 420 aa9.59□□□□□ -0.87
LSM5-201ENST00000223084 DUSP18Q8NEJ0 188 aa9.59□□□□□ -0.87
LSM5-201ENST00000223084 SLC24A4Q8NFF2 622 aa9.59□□□□□ -0.87
LSM5-201ENST00000223084 DTD1Q8TEA8 209 aa9.59□□□□□ -0.87
LSM5-201ENST00000223084 TMEM190Q8WZ59 177 aa9.59□□□□□ -0.87
LSM5-201ENST00000223084 TXN2Q99757 166 aa9.59□□□□□ -0.87
LSM5-201ENST00000223084 C20orf24Q9BUV8 137 aa9.59□□□□□ -0.87
LSM5-201ENST00000223084 HIPK2Q9H2X6 1198 aa9.59□□□□□ -0.87
LSM5-201ENST00000223084 TMED3Q9Y3Q3 217 aa9.59□□□□□ -0.87
LSM5-201ENST00000223084 PIGBOS1A0A0B4J2F0 54 aa9.58□□□□□ -0.88
LSM5-201ENST00000223084 MPTX1A8MV57 137 aa9.58□□□□□ -0.88
LSM5-201ENST00000223084 CORTO00230 105 aa9.58□□□□□ -0.88
LSM5-201ENST00000223084 UPK1BO75841 260 aa9.58□□□□□ -0.88
LSM5-201ENST00000223084 IFNA10P01566 189 aa9.58□□□□□ -0.88
LSM5-201ENST00000223084 IAPPP10997 89 aa9.58□□□□□ -0.88
LSM5-201ENST00000223084 SLC25A6P12236 298 aa9.58□□□□□ -0.88
LSM5-201ENST00000223084 NPY1RP25929 384 aa9.58□□□□□ -0.88
LSM5-201ENST00000223084 NPBWR1P48145 328 aa9.58□□□□□ -0.88
LSM5-201ENST00000223084 LCN12Q6JVE5 192 aa9.58□□□□□ -0.88
LSM5-201ENST00000223084 COQ8AQ8NI60 647 aa9.58□□□□□ -0.88
LSM5-201ENST00000223084 MAGT1Q9H0U3 335 aa9.58□□□□□ -0.88
LSM5-201ENST00000223084 PALMDQ9NP74 551 aa9.58□□□□□ -0.88
LSM5-201ENST00000223084 NUDT15Q9NV35 164 aa9.58□□□□□ -0.88
LSM5-201ENST00000223084 GAR1Q9NY12 217 aaKnown RBP9.58□□□□□ -0.88
LSM5-201ENST00000223084 CACFD1Q9UGQ2 172 aa9.58□□□□□ -0.88
LSM5-201ENST00000223084 MLXQ9UH92 298 aa9.58□□□□□ -0.88
LSM5-201ENST00000223084 UFC1Q9Y3C8 167 aa9.58□□□□□ -0.88
LSM5-201ENST00000223084 FAM240BA0A1B0GVZ2 78 aa9.57□□□□□ -0.88
LSM5-201ENST00000223084 ZNF785A8K8V0 405 aa9.57□□□□□ -0.88
LSM5-201ENST00000223084 YIF1AO95070 293 aa9.57□□□□□ -0.88
LSM5-201ENST00000223084 TMEM50AO95807 157 aa9.57□□□□□ -0.88
LSM5-201ENST00000223084 C8orf88P0DMB2 117 aa9.57□□□□□ -0.88
LSM5-201ENST00000223084 ASAH1Q13510 395 aa9.57□□□□□ -0.88
LSM5-201ENST00000223084 BTNL8Q6UX41 500 aa9.57□□□□□ -0.88
LSM5-201ENST00000223084 WDR89Q96FK6 387 aaPredicted RBP9.57□□□□□ -0.88
LSM5-201ENST00000223084 SEC22CQ9BRL7 303 aa9.57□□□□□ -0.88
LSM5-201ENST00000223084 TECRQ9NZ01 308 aaKnown RBP9.57□□□□□ -0.88
LSM5-201ENST00000223084 SMAD5-AS1Q9Y6J3 95 aa9.57□□□□□ -0.88
LSM5-201ENST00000223084 DNAH9Q9NYC9 4486 aa9.57□□□□□ -0.88
LSM5-201ENST00000223084 CLN5O75503 358 aa9.56□□□□□ -0.88
LSM5-201ENST00000223084 H2AFB2P0C5Z0 115 aa9.56□□□□□ -0.88
LSM5-201ENST00000223084 ELLP55199 621 aaPredicted RBP9.56□□□□□ -0.88
LSM5-201ENST00000223084 RELQ04864 619 aaPredicted RBP9.56□□□□□ -0.88
LSM5-201ENST00000223084 DCTN2Q13561 401 aaKnown RBP9.56□□□□□ -0.88
LSM5-201ENST00000223084 GUCA2BQ16661 112 aa9.56□□□□□ -0.88
LSM5-201ENST00000223084 MZT2BQ6NZ67 158 aa9.56□□□□□ -0.88
LSM5-201ENST00000223084 TMEM61Q8N0U2 210 aa9.56□□□□□ -0.88
LSM5-201ENST00000223084 Q8N1Y9 231 aa9.56□□□□□ -0.88
LSM5-201ENST00000223084 OR2K2Q8NGT1 345 aa9.56□□□□□ -0.88
LSM5-201ENST00000223084 OR4X1Q8NH49 305 aa9.56□□□□□ -0.88
LSM5-201ENST00000223084 RNASEH2CQ8TDP1 164 aaKnown RBP9.56□□□□□ -0.88
LSM5-201ENST00000223084 DAZ1Q9NQZ3 744 aaKnown RBP9.56□□□□□ -0.88
LSM5-201ENST00000223084 MRPL27Q9P0M9 148 aaKnown RBP9.56□□□□□ -0.88
LSM5-201ENST00000223084 U3KQ87 197 aa9.56□□□□□ -0.88
LSM5-201ENST00000223084 IGHV3-49A0A0A0MS15 119 aa9.55□□□□□ -0.88
LSM5-201ENST00000223084 RPS10-NUDT3A0A1W2PQS6 291 aa9.55□□□□□ -0.88
LSM5-201ENST00000223084 C15orf62A8K5M9 175 aa9.55□□□□□ -0.88
LSM5-201ENST00000223084 FAM90A26D6RGX4 464 aa9.55□□□□□ -0.88
LSM5-201ENST00000223084 SCAF4O95104 1147 aaKnown RBP9.55□□□□□ -0.88
LSM5-201ENST00000223084 IFNA21P01568 189 aa9.55□□□□□ -0.88
LSM5-201ENST00000223084 RND2P52198 227 aa9.55□□□□□ -0.88
LSM5-201ENST00000223084 CD69Q07108 199 aa9.55□□□□□ -0.88
LSM5-201ENST00000223084 TIGITQ495A1 244 aa9.55□□□□□ -0.88
LSM5-201ENST00000223084 PRSS54Q6PEW0 395 aa9.55□□□□□ -0.88
LSM5-201ENST00000223084 TOMM20LQ6UXN7 152 aa9.55□□□□□ -0.88
LSM5-201ENST00000223084 MITD1Q8WV92 249 aa9.55□□□□□ -0.88
LSM5-201ENST00000223084 MARC2Q969Z3 335 aa9.55□□□□□ -0.88
LSM5-201ENST00000223084 ASCL2Q99929 193 aa9.55□□□□□ -0.88
LSM5-201ENST00000223084 B9D2Q9BPU9 175 aa9.55□□□□□ -0.88
LSM5-201ENST00000223084 PAIP2BQ9ULR5 123 aaKnown RBP9.55□□□□□ -0.88
LSM5-201ENST00000223084 K7EMT4 169 aa9.54□□□□□ -0.88
LSM5-201ENST00000223084 WRBO00258 174 aa9.54□□□□□ -0.88
LSM5-201ENST00000223084 CCSO14618 274 aa9.54□□□□□ -0.88
LSM5-201ENST00000223084 SYNGR2O43760 224 aa9.54□□□□□ -0.88
LSM5-201ENST00000223084 MED6O75586 246 aa9.54□□□□□ -0.88
LSM5-201ENST00000223084 IGKV1-17P01599 117 aa9.54□□□□□ -0.88
LSM5-201ENST00000223084 IFNA4P05014 189 aa9.54□□□□□ -0.88
LSM5-201ENST00000223084 CD7P09564 240 aa9.54□□□□□ -0.88
LSM5-201ENST00000223084 ZNF600Q6ZNG1 722 aa9.54□□□□□ -0.88
LSM5-201ENST00000223084 SLC16A13Q7RTY0 426 aa9.54□□□□□ -0.88
LSM5-201ENST00000223084 NOXA1Q86UR1 476 aa9.54□□□□□ -0.88
LSM5-201ENST00000223084 OR4D5Q8NGN0 318 aa9.54□□□□□ -0.88
LSM5-201ENST00000223084 OR10C1Q96KK4 312 aa9.54□□□□□ -0.88
LSM5-201ENST00000223084 PUS1Q9Y606 427 aaKnown RBP eCLIP9.54□□□□□ -0.88
LSM5-201ENST00000223084 IGHV3OR16-13A0A075B7E8 117 aa9.53□□□□□ -0.88
LSM5-201ENST00000223084 IGHV3-74A0A0B4J1X5 117 aa9.53□□□□□ -0.88
LSM5-201ENST00000223084 FRMD6-AS1P0C7T7 363 aa9.53□□□□□ -0.88
LSM5-201ENST00000223084 IGHV4-30-4P0DP06 118 aa9.53□□□□□ -0.88
LSM5-201ENST00000223084 SLC25A4P12235 298 aa9.53□□□□□ -0.88
LSM5-201ENST00000223084 CD81P60033 236 aa9.53□□□□□ -0.88
LSM5-201ENST00000223084 POLR2GP62487 172 aaKnown RBP eCLIP9.53□□□□□ -0.88
LSM5-201ENST00000223084 ID3Q02535 119 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms