RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 IGFBPL1Q8WX77 278 aa11.84□□□□□ -0.51
CNOT3-201ENST00000221232 SLC35E1Q96K37 410 aa11.84□□□□□ -0.51
CNOT3-201ENST00000221232 TXNDC17Q9BRA2 123 aa11.84□□□□□ -0.51
CNOT3-201ENST00000221232 SSBP3Q9BWW4 388 aaPredicted RBP11.84□□□□□ -0.51
CNOT3-201ENST00000221232 FKBP11Q9NYL4 201 aa11.84□□□□□ -0.51
CNOT3-201ENST00000221232 ZNF705FA8MVS1 300 aaPredicted RBP11.83□□□□□ -0.52
CNOT3-201ENST00000221232 ZNF705DP0CH99 300 aaPredicted RBP11.83□□□□□ -0.52
CNOT3-201ENST00000221232 ZNF705BP0CI00 300 aaPredicted RBP11.83□□□□□ -0.52
CNOT3-201ENST00000221232 LRRC10Q5BKY1 277 aa11.83□□□□□ -0.52
CNOT3-201ENST00000221232 Q8NA96 180 aa11.83□□□□□ -0.52
CNOT3-201ENST00000221232 OR5AU1Q8NGC0 362 aa11.83□□□□□ -0.52
CNOT3-201ENST00000221232 OR5R1Q8NH85 324 aa11.83□□□□□ -0.52
CNOT3-201ENST00000221232 RNASEH2CQ8TDP1 164 aaKnown RBP11.83□□□□□ -0.52
CNOT3-201ENST00000221232 CGB1A6NKQ9 187 aa11.83□□□□□ -0.52
CNOT3-201ENST00000221232 H3BTX0 84 aa11.83□□□□□ -0.52
CNOT3-201ENST00000221232 AREGP15514 252 aa11.83□□□□□ -0.52
CNOT3-201ENST00000221232 CNTFRP26992 372 aa11.83□□□□□ -0.52
CNOT3-201ENST00000221232 UBE2L3P68036 154 aaKnown RBP11.83□□□□□ -0.52
CNOT3-201ENST00000221232 MRPL54Q6P161 138 aaKnown RBP11.83□□□□□ -0.52
CNOT3-201ENST00000221232 ST6GALNAC3Q8NDV1 305 aa11.83□□□□□ -0.52
CNOT3-201ENST00000221232 OSR1Q8TAX0 266 aaPredicted RBP11.83□□□□□ -0.52
CNOT3-201ENST00000221232 MS4A10Q96PG2 267 aa11.83□□□□□ -0.52
CNOT3-201ENST00000221232 SLC25A33Q9BSK2 321 aa11.83□□□□□ -0.52
CNOT3-201ENST00000221232 LINC00574Q9H8X3 128 aa11.83□□□□□ -0.52
CNOT3-201ENST00000221232 TMEM167BQ9NRX6 74 aa11.83□□□□□ -0.52
CNOT3-201ENST00000221232 RPH3ALQ9UNE2 315 aa11.83□□□□□ -0.52
CNOT3-201ENST00000221232 MALRD1Q5VYJ5 2156 aa11.83□□□□□ -0.52
CNOT3-201ENST00000221232 MOSP00540 346 aa11.82□□□□□ -0.52
CNOT3-201ENST00000221232 ORM2P19652 201 aa11.82□□□□□ -0.52
CNOT3-201ENST00000221232 SSX2Q16385 188 aa11.82□□□□□ -0.52
CNOT3-201ENST00000221232 RPEL1Q2QD12 228 aa11.82□□□□□ -0.52
CNOT3-201ENST00000221232 BAGE3Q86Y29 109 aa11.82□□□□□ -0.52
CNOT3-201ENST00000221232 BAGE2Q86Y30 109 aa11.82□□□□□ -0.52
CNOT3-201ENST00000221232 PRSS33Q8NF86 280 aa11.82□□□□□ -0.52
CNOT3-201ENST00000221232 OR5AN1Q8NGI8 311 aa11.82□□□□□ -0.52
CNOT3-201ENST00000221232 MISP3Q96FF7 219 aa11.82□□□□□ -0.52
CNOT3-201ENST00000221232 FAM103A1Q9BTL3 118 aaKnown RBP11.82□□□□□ -0.52
CNOT3-201ENST00000221232 V9GYV3 84 aa11.82□□□□□ -0.52
CNOT3-201ENST00000221232 C8orf88P0DMB2 117 aa11.82□□□□□ -0.52
CNOT3-201ENST00000221232 TIGITQ495A1 244 aa11.82□□□□□ -0.52
CNOT3-201ENST00000221232 OR4C13Q8NGP0 309 aa11.82□□□□□ -0.52
CNOT3-201ENST00000221232 BLNKQ8WV28 456 aa11.82□□□□□ -0.52
CNOT3-201ENST00000221232 RNASE6Q93091 150 aaKnown RBP11.82□□□□□ -0.52
CNOT3-201ENST00000221232 GSX1Q9H4S2 264 aaPredicted RBP11.82□□□□□ -0.52
CNOT3-201ENST00000221232 DNAJC4Q9NNZ3 241 aa11.82□□□□□ -0.52
CNOT3-201ENST00000221232 E7EQL1 145 aa11.81□□□□□ -0.52
CNOT3-201ENST00000221232 DLL1O00548 723 aa11.81□□□□□ -0.52
CNOT3-201ENST00000221232 COX7A2P2O60397 106 aa11.81□□□□□ -0.52
CNOT3-201ENST00000221232 CRISP2P16562 243 aa11.81□□□□□ -0.52
CNOT3-201ENST00000221232 PRR27Q6MZM9 219 aa11.81□□□□□ -0.52
CNOT3-201ENST00000221232 TGIF2LXQ8IUE1 241 aa11.81□□□□□ -0.52
CNOT3-201ENST00000221232 CMTM2Q8TAZ6 248 aa11.81□□□□□ -0.52
CNOT3-201ENST00000221232 FAM168AQ92567 244 aa11.81□□□□□ -0.52
CNOT3-201ENST00000221232 ZNF355PQ9NSJ1 428 aa11.81□□□□□ -0.52
CNOT3-201ENST00000221232 TP53TG3Q9ULZ0 132 aa11.81□□□□□ -0.52
CNOT3-201ENST00000221232 SERF1AO75920 110 aa11.81□□□□□ -0.52
CNOT3-201ENST00000221232 GCGP01275 180 aa11.81□□□□□ -0.52
CNOT3-201ENST00000221232 TDGF1P3P51864 188 aa11.81□□□□□ -0.52
CNOT3-201ENST00000221232 TAS2R45P59539 299 aa11.81□□□□□ -0.52
CNOT3-201ENST00000221232 FOXC1Q12948 553 aa11.81□□□□□ -0.52
CNOT3-201ENST00000221232 REC114Q7Z4M0 266 aa11.81□□□□□ -0.52
CNOT3-201ENST00000221232 ATG101Q9BSB4 218 aa11.81□□□□□ -0.52
CNOT3-201ENST00000221232 SLC25A2Q9BXI2 301 aa11.81□□□□□ -0.52
CNOT3-201ENST00000221232 NAT8BQ9UHF3 227 aa11.81□□□□□ -0.52
CNOT3-201ENST00000221232 RANP62826 216 aaKnown RBP11.81□□□□□ -0.52
CNOT3-201ENST00000221232 LINC01560Q8TB33 94 aa11.81□□□□□ -0.52
CNOT3-201ENST00000221232 C11orf52Q96A22 123 aa11.81□□□□□ -0.52
CNOT3-201ENST00000221232 BTF3L4Q96K17 158 aa11.81□□□□□ -0.52
CNOT3-201ENST00000221232 CUL9Q8IWT3 2517 aa11.8□□□□□ -0.52
CNOT3-201ENST00000221232 A8MWP6 167 aa11.8□□□□□ -0.52
CNOT3-201ENST00000221232 LOXP28300 417 aaPredicted RBP11.8□□□□□ -0.52
CNOT3-201ENST00000221232 GNG5P63218 68 aa11.8□□□□□ -0.52
CNOT3-201ENST00000221232 MEF2CQ06413 473 aaPredicted RBP11.8□□□□□ -0.52
CNOT3-201ENST00000221232 DCHS2Q6V1P9 2916 aa11.8□□□□□ -0.52
CNOT3-201ENST00000221232 FAM87AP0C7U9 286 aa11.8□□□□□ -0.52
CNOT3-201ENST00000221232 TDRG1Q3Y452 100 aa11.8□□□□□ -0.52
CNOT3-201ENST00000221232 LEMD1Q68G75 181 aa11.8□□□□□ -0.52
CNOT3-201ENST00000221232 PATE2Q6UY27 113 aa11.8□□□□□ -0.52
CNOT3-201ENST00000221232 USF1P22415 310 aaPredicted RBP11.79□□□□□ -0.52
CNOT3-201ENST00000221232 COX7A1P24310 79 aa11.79□□□□□ -0.52
CNOT3-201ENST00000221232 YPEL3P61236 119 aaPredicted RBP11.79□□□□□ -0.52
CNOT3-201ENST00000221232 TNXAQ16473 311 aa11.79□□□□□ -0.52
CNOT3-201ENST00000221232 TMEM177Q53S58 311 aa11.79□□□□□ -0.52
CNOT3-201ENST00000221232 C10orf113Q5VZT2 155 aa11.79□□□□□ -0.52
CNOT3-201ENST00000221232 OR1B1Q8NGR6 318 aa11.79□□□□□ -0.52
CNOT3-201ENST00000221232 FAM167A-AS1Q96KT0 104 aa11.79□□□□□ -0.52
CNOT3-201ENST00000221232 RALYQ9UKM9 306 aaKnown RBP11.79□□□□□ -0.52
CNOT3-201ENST00000221232 MED13LQ71F56 2210 aa11.79□□□□□ -0.52
CNOT3-201ENST00000221232 A0A1W2PPI3 338 aa11.79□□□□□ -0.52
CNOT3-201ENST00000221232 C9JCJ5 164 aa11.79□□□□□ -0.52
CNOT3-201ENST00000221232 LY6HO94772 140 aa11.79□□□□□ -0.52
CNOT3-201ENST00000221232 IGLV2-23P01705 113 aa11.79□□□□□ -0.52
CNOT3-201ENST00000221232 WASHC3Q9Y3C0 194 aa11.79□□□□□ -0.52
CNOT3-201ENST00000221232 LINC00310P59036 64 aa11.78□□□□□ -0.52
CNOT3-201ENST00000221232 IBA57Q5T440 356 aaKnown RBP11.78□□□□□ -0.52
CNOT3-201ENST00000221232 TBX15Q96SF7 602 aa11.78□□□□□ -0.52
CNOT3-201ENST00000221232 HSPB9Q9BQS6 159 aa11.78□□□□□ -0.52
CNOT3-201ENST00000221232 PAXXQ9BUH6 204 aa11.78□□□□□ -0.52
CNOT3-201ENST00000221232 SAMD10Q9BYL1 202 aa11.78□□□□□ -0.52
CNOT3-201ENST00000221232 TOX4O94842 621 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 117.9 ms