RNA–Protein interactions for RNA: ENST00000220562.8

EXTL3-201, Transcript of exostosin like glycosyltransferase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXTL3, Length 6,483 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-201ENST00000220562 CHD5Q8TDI0 1954 aa14.85□□□□□ -0.03
EXTL3-201ENST00000220562 GREB1LQ9C091 1923 aaPredicted RBP14.85□□□□□ -0.03
EXTL3-201ENST00000220562 WFDC12Q8WWY7 111 aa14.85□□□□□ -0.03
EXTL3-201ENST00000220562 EVI2AP22794 236 aa14.84□□□□□ -0.03
EXTL3-201ENST00000220562 PAQR4Q8N4S7 273 aaPredicted RBP14.84□□□□□ -0.03
EXTL3-201ENST00000220562 MESP1Q9BRJ9 268 aa14.84□□□□□ -0.03
EXTL3-201ENST00000220562 MYOD1P15172 320 aa14.84□□□□□ -0.03
EXTL3-201ENST00000220562 PPIFP30405 207 aaKnown RBP14.84□□□□□ -0.03
EXTL3-201ENST00000220562 SAMD13Q5VXD3 122 aa14.84□□□□□ -0.03
EXTL3-201ENST00000220562 VSIRQ9H7M9 311 aa14.84□□□□□ -0.03
EXTL3-201ENST00000220562 ZNF257Q9Y2Q1 563 aa14.84□□□□□ -0.03
EXTL3-201ENST00000220562 ARID1AO14497 2285 aa14.84□□□□□ -0.03
EXTL3-201ENST00000220562 C19orf67A6NJJ6 358 aa14.84□□□□□ -0.03
EXTL3-201ENST00000220562 C1QL4Q86Z23 238 aa14.84□□□□□ -0.03
EXTL3-201ENST00000220562 IGKV1D-8A0A087WSZ0 117 aa14.84□□□□□ -0.03
EXTL3-201ENST00000220562 PRCDQ00LT1 54 aa14.84□□□□□ -0.03
EXTL3-201ENST00000220562 NUDT10Q8NFP7 164 aa14.84□□□□□ -0.03
EXTL3-201ENST00000220562 PGPEP1LA6NFU8 196 aa14.83□□□□□ -0.03
EXTL3-201ENST00000220562 NPFFR1Q9GZQ6 430 aa14.83□□□□□ -0.03
EXTL3-201ENST00000220562 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.83□□□□□ -0.04
EXTL3-201ENST00000220562 PSG8Q9UQ74 426 aa14.83□□□□□ -0.04
EXTL3-201ENST00000220562 TIMM23O14925 209 aa14.83□□□□□ -0.04
EXTL3-201ENST00000220562 SRD5A1P18405 259 aa14.83□□□□□ -0.04
EXTL3-201ENST00000220562 DUTP33316 252 aaKnown RBP14.83□□□□□ -0.04
EXTL3-201ENST00000220562 SIPA1L1O43166 1804 aa14.83□□□□□ -0.04
EXTL3-201ENST00000220562 IGHV1-46P01743 117 aa14.83□□□□□ -0.04
EXTL3-201ENST00000220562 EFNB3Q15768 340 aa14.83□□□□□ -0.04
EXTL3-201ENST00000220562 PRSS22Q9GZN4 317 aa14.83□□□□□ -0.04
EXTL3-201ENST00000220562 IGHV4-39P01824 125 aa14.83□□□□□ -0.04
EXTL3-201ENST00000220562 OR10W1Q8NGF6 305 aa14.83□□□□□ -0.04
EXTL3-201ENST00000220562 VCX2Q9H322 139 aa14.83□□□□□ -0.04
EXTL3-201ENST00000220562 NIT1Q86X76 327 aa14.82□□□□□ -0.04
EXTL3-201ENST00000220562 NEUROG3Q9Y4Z2 214 aa14.82□□□□□ -0.04
EXTL3-201ENST00000220562 LOC105371267A0A1B0GV96 52 aa14.82□□□□□ -0.04
EXTL3-201ENST00000220562 F8VVB4 439 aa14.82□□□□□ -0.04
EXTL3-201ENST00000220562 F8VWA3 439 aa14.82□□□□□ -0.04
EXTL3-201ENST00000220562 IFI27P40305 119 aaPredicted RBP14.82□□□□□ -0.04
EXTL3-201ENST00000220562 SRSF1Q07955 248 aaKnown RBP eCLIP14.82□□□□□ -0.04
EXTL3-201ENST00000220562 FAM89BQ8N5H3 189 aa14.82□□□□□ -0.04
EXTL3-201ENST00000220562 H0YIZ8 118 aa14.82□□□□□ -0.04
EXTL3-201ENST00000220562 CA1P00915 261 aaPredicted RBP14.82□□□□□ -0.04
EXTL3-201ENST00000220562 FBLN5Q9UBX5 448 aa14.82□□□□□ -0.04
EXTL3-201ENST00000220562 OR5A1Q8NGJ0 315 aa14.82□□□□□ -0.04
EXTL3-201ENST00000220562 COQ2Q96H96 371 aa14.82□□□□□ -0.04
EXTL3-201ENST00000220562 TRAV21A0A0B4J279 112 aa14.82□□□□□ -0.04
EXTL3-201ENST00000220562 LINC00614P0C842 121 aa14.81□□□□□ -0.04
EXTL3-201ENST00000220562 TRAV5A0A0B4J249 113 aa14.81□□□□□ -0.04
EXTL3-201ENST00000220562 FOXF2Q12947 444 aa14.81□□□□□ -0.04
EXTL3-201ENST00000220562 TMEM95Q3KNT9 176 aa14.81□□□□□ -0.04
EXTL3-201ENST00000220562 SELENOKQ9Y6D0 94 aa14.81□□□□□ -0.04
EXTL3-201ENST00000220562 ZFP36L1Q07352 338 aaKnown RBP14.81□□□□□ -0.04
EXTL3-201ENST00000220562 MTURNQ8N3F0 131 aa14.81□□□□□ -0.04
EXTL3-201ENST00000220562 LOC285556D6RIA3 1793 aa14.81□□□□□ -0.04
EXTL3-201ENST00000220562 A0A0G2JMZ2 1700 aa14.81□□□□□ -0.04
EXTL3-201ENST00000220562 LRRC37A2A6NM11 1700 aa14.81□□□□□ -0.04
EXTL3-201ENST00000220562 OCC1Q8TAD7 63 aa14.81□□□□□ -0.04
EXTL3-201ENST00000220562 PRDM13Q9H4Q3 707 aa14.81□□□□□ -0.04
EXTL3-201ENST00000220562 FAM90A9PA6NNJ1 464 aa14.8□□□□□ -0.04
EXTL3-201ENST00000220562 H3BUT2 72 aa14.8□□□□□ -0.04
EXTL3-201ENST00000220562 PCP4P48539 62 aa14.8□□□□□ -0.04
EXTL3-201ENST00000220562 ZNF585BQ52M93 769 aa14.8□□□□□ -0.04
EXTL3-201ENST00000220562 C8orf46Q8TAG6 207 aa14.8□□□□□ -0.04
EXTL3-201ENST00000220562 OSTCQ9NRP0 149 aa14.8□□□□□ -0.04
EXTL3-201ENST00000220562 MLNRO43193 412 aa14.8□□□□□ -0.04
EXTL3-201ENST00000220562 CHTOPQ9Y3Y2 248 aaKnown RBP14.8□□□□□ -0.04
EXTL3-201ENST00000220562 TRAV12-3A0A0B4J271 114 aa14.79□□□□□ -0.04
EXTL3-201ENST00000220562 DUSP14O95147 198 aaKnown RBP14.79□□□□□ -0.04
EXTL3-201ENST00000220562 NSUN5P1Q3KNT7 163 aa14.79□□□□□ -0.04
EXTL3-201ENST00000220562 SIGLEC15Q6ZMC9 328 aa14.79□□□□□ -0.04
EXTL3-201ENST00000220562 HBDP02042 147 aa14.79□□□□□ -0.04
EXTL3-201ENST00000220562 CRYGSP22914 178 aa14.79□□□□□ -0.04
EXTL3-201ENST00000220562 JMJD8Q96S16 334 aa14.79□□□□□ -0.04
EXTL3-201ENST00000220562 TRAV40A0A0B4J280 105 aa14.79□□□□□ -0.04
EXTL3-201ENST00000220562 MPZP25189 248 aa14.79□□□□□ -0.04
EXTL3-201ENST00000220562 IGKV1-12A0A0C4DH73 117 aa14.79□□□□□ -0.04
EXTL3-201ENST00000220562 IGKV1D-12P01611 117 aa14.79□□□□□ -0.04
EXTL3-201ENST00000220562 LY6DQ14210 128 aa14.79□□□□□ -0.04
EXTL3-201ENST00000220562 LINC00527Q9UJ94 153 aa14.79□□□□□ -0.04
EXTL3-201ENST00000220562 A0A1W2PRE2 83 aa14.78□□□□□ -0.04
EXTL3-201ENST00000220562 DPM2O94777 84 aa14.78□□□□□ -0.04
EXTL3-201ENST00000220562 SFTA2Q6UW10 78 aa14.78□□□□□ -0.04
EXTL3-201ENST00000220562 KIR3DL3Q8N743 410 aa14.78□□□□□ -0.04
EXTL3-201ENST00000220562 NAPSAO96009 420 aa14.78□□□□□ -0.04
EXTL3-201ENST00000220562 VMO1Q7Z5L0 202 aa14.78□□□□□ -0.04
EXTL3-201ENST00000220562 GTF3AQ92664 365 aaKnown RBP14.78□□□□□ -0.04
EXTL3-201ENST00000220562 VKORC1Q9BQB6 163 aa14.78□□□□□ -0.04
EXTL3-201ENST00000220562 PAX8Q06710 450 aa14.78□□□□□ -0.04
EXTL3-201ENST00000220562 CD33P20138 364 aa14.78□□□□□ -0.04
EXTL3-201ENST00000220562 ID3Q02535 119 aa14.78□□□□□ -0.04
EXTL3-201ENST00000220562 STAG3L3P0CL85 134 aa14.78□□□□□ -0.04
EXTL3-201ENST00000220562 GGNQ86UU5 652 aa14.77□□□□□ -0.04
EXTL3-201ENST00000220562 CD28P10747 220 aa14.77□□□□□ -0.04
EXTL3-201ENST00000220562 GNB1LQ9BYB4 327 aa14.77□□□□□ -0.04
EXTL3-201ENST00000220562 FNDC4Q9H6D8 234 aaPredicted RBP14.77□□□□□ -0.04
EXTL3-201ENST00000220562 FAM169BQ8N8A8 192 aa14.77□□□□□ -0.04
EXTL3-201ENST00000220562 C11orf44Q8N8P7 122 aa14.77□□□□□ -0.04
EXTL3-201ENST00000220562 NHP2Q9NX24 153 aaKnown RBP14.77□□□□□ -0.04
EXTL3-201ENST00000220562 LAMTOR2Q9Y2Q5 125 aa14.77□□□□□ -0.04
EXTL3-201ENST00000220562 IGHV2-26A0A0B4J1V2 119 aa14.77□□□□□ -0.05
EXTL3-201ENST00000220562 WNT2P09544 360 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms