RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 E7EQL1 145 aa10.67□□□□□ -0.7
CTNS-201ENST00000046640 TMEM178BH3BS89 294 aa10.67□□□□□ -0.7
CTNS-201ENST00000046640 CA1P00915 261 aaPredicted RBP10.67□□□□□ -0.7
CTNS-201ENST00000046640 CD99P14209 185 aa10.67□□□□□ -0.7
CTNS-201ENST00000046640 PMCHP20382 165 aa10.67□□□□□ -0.7
CTNS-201ENST00000046640 ST6GALNAC3Q8NDV1 305 aa10.67□□□□□ -0.7
CTNS-201ENST00000046640 RAB1CQ92928 201 aa10.67□□□□□ -0.7
CTNS-201ENST00000046640 IL36BQ9NZH7 164 aa10.67□□□□□ -0.7
CTNS-201ENST00000046640 NAT8BQ9UHF3 227 aa10.67□□□□□ -0.7
CTNS-201ENST00000046640 LINC00312Q9Y6C7 94 aa10.67□□□□□ -0.7
CTNS-201ENST00000046640 SPTBN1Q01082 2364 aaKnown RBP10.67□□□□□ -0.7
CTNS-201ENST00000046640 RHOBP62745 196 aa10.67□□□□□ -0.7
CTNS-201ENST00000046640 RNASE6Q93091 150 aaKnown RBP10.67□□□□□ -0.7
CTNS-201ENST00000046640 EAF1Q96JC9 268 aaPredicted RBP10.67□□□□□ -0.7
CTNS-201ENST00000046640 FAM90A27PA6NNH2 459 aa10.66□□□□□ -0.7
CTNS-201ENST00000046640 UPK2O00526 184 aa10.66□□□□□ -0.7
CTNS-201ENST00000046640 NDUFB3O43676 98 aa10.66□□□□□ -0.7
CTNS-201ENST00000046640 RPEL1Q2QD12 228 aa10.66□□□□□ -0.7
CTNS-201ENST00000046640 CENPWQ5EE01 88 aa10.66□□□□□ -0.7
CTNS-201ENST00000046640 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.66□□□□□ -0.7
CTNS-201ENST00000046640 GAL3ST2Q9H3Q3 398 aa10.66□□□□□ -0.7
CTNS-201ENST00000046640 IGKV1OR2-108A0A075B7D4 117 aa10.66□□□□□ -0.7
CTNS-201ENST00000046640 HELTA6NFD8 242 aa10.66□□□□□ -0.7
CTNS-201ENST00000046640 MPDU1O75352 247 aa10.66□□□□□ -0.7
CTNS-201ENST00000046640 TFPI2P48307 235 aa10.66□□□□□ -0.7
CTNS-201ENST00000046640 GNG4P50150 75 aa10.66□□□□□ -0.7
CTNS-201ENST00000046640 OR5AU1Q8NGC0 362 aa10.66□□□□□ -0.7
CTNS-201ENST00000046640 OR9G1Q8NH87 305 aa10.66□□□□□ -0.7
CTNS-201ENST00000046640 ADTRPQ96IZ2 230 aa10.66□□□□□ -0.7
CTNS-201ENST00000046640 RITA1Q96K30 269 aa10.66□□□□□ -0.7
CTNS-201ENST00000046640 CBY1Q9Y3M2 126 aa10.66□□□□□ -0.7
CTNS-201ENST00000046640 LSM4Q9Y4Z0 139 aaKnown RBP10.66□□□□□ -0.7
CTNS-201ENST00000046640 ENSAO43768 121 aaKnown RBP10.65□□□□□ -0.7
CTNS-201ENST00000046640 PCP4P48539 62 aa10.65□□□□□ -0.7
CTNS-201ENST00000046640 SUMO1P63165 101 aaKnown RBP10.65□□□□□ -0.7
CTNS-201ENST00000046640 KIR2DL5BA0A0G2JN68 375 aa10.65□□□□□ -0.7
CTNS-201ENST00000046640 KIR2DL5BA0A0G2JPC4 375 aa10.65□□□□□ -0.7
CTNS-201ENST00000046640 SHISA9B4DS77 424 aa10.65□□□□□ -0.7
CTNS-201ENST00000046640 ITGB1BP1O14713 200 aa10.65□□□□□ -0.7
CTNS-201ENST00000046640 RPLP1P05386 114 aaKnown RBP10.65□□□□□ -0.7
CTNS-201ENST00000046640 REG1AP05451 166 aa10.65□□□□□ -0.7
CTNS-201ENST00000046640 YPEL3P61236 119 aaPredicted RBP10.65□□□□□ -0.7
CTNS-201ENST00000046640 LHFPL4Q7Z7J7 247 aa10.65□□□□□ -0.7
CTNS-201ENST00000046640 KIR2DL5AQ8N109 375 aa10.65□□□□□ -0.7
CTNS-201ENST00000046640 FAM19A2Q8N3H0 131 aa10.65□□□□□ -0.7
CTNS-201ENST00000046640 OR2T6Q8NHC8 308 aa10.65□□□□□ -0.7
CTNS-201ENST00000046640 CORO2AQ92828 525 aa10.65□□□□□ -0.7
CTNS-201ENST00000046640 VAMP8Q9BV40 100 aa10.65□□□□□ -0.7
CTNS-201ENST00000046640 SSBP3Q9BWW4 388 aaPredicted RBP10.65□□□□□ -0.7
CTNS-201ENST00000046640 GNB4Q9HAV0 340 aa10.65□□□□□ -0.7
CTNS-201ENST00000046640 PRNDQ9UKY0 176 aa10.65□□□□□ -0.7
CTNS-201ENST00000046640 AKAP6Q13023 2319 aa10.64□□□□□ -0.71
CTNS-201ENST00000046640 BTF3L4Q96K17 158 aa10.64□□□□□ -0.71
CTNS-201ENST00000046640 LINC00479Q96M42 142 aa10.64□□□□□ -0.71
CTNS-201ENST00000046640 COMMD5Q9GZQ3 224 aa10.64□□□□□ -0.71
CTNS-201ENST00000046640 LY6HO94772 140 aa10.64□□□□□ -0.71
CTNS-201ENST00000046640 LGALS4P56470 323 aa10.64□□□□□ -0.71
CTNS-201ENST00000046640 TMPRSS3P57727 454 aa10.64□□□□□ -0.71
CTNS-201ENST00000046640 RAB31Q13636 194 aa10.64□□□□□ -0.71
CTNS-201ENST00000046640 LRRC10Q5BKY1 277 aa10.64□□□□□ -0.71
CTNS-201ENST00000046640 TPTE2P1Q5T6R2 138 aa10.64□□□□□ -0.71
CTNS-201ENST00000046640 ATOH7Q8N100 152 aa10.64□□□□□ -0.71
CTNS-201ENST00000046640 SIGLECL1Q8N7X8 197 aa10.64□□□□□ -0.71
CTNS-201ENST00000046640 RCHY1Q96PM5 261 aa10.64□□□□□ -0.71
CTNS-201ENST00000046640 NABP2Q9BQ15 211 aa10.64□□□□□ -0.71
CTNS-201ENST00000046640 NCOR1P1Q9H4R4 102 aa10.64□□□□□ -0.71
CTNS-201ENST00000046640 TRAV5A0A0B4J249 113 aa10.63□□□□□ -0.71
CTNS-201ENST00000046640 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.63□□□□□ -0.71
CTNS-201ENST00000046640 H0YJW9 148 aa10.63□□□□□ -0.71
CTNS-201ENST00000046640 APOA2P02652 100 aa10.63□□□□□ -0.71
CTNS-201ENST00000046640 NTF3P20783 257 aa10.63□□□□□ -0.71
CTNS-201ENST00000046640 PRCDQ00LT1 54 aa10.63□□□□□ -0.71
CTNS-201ENST00000046640 FLYWCH2Q96CP2 140 aaKnown RBP10.63□□□□□ -0.71
CTNS-201ENST00000046640 SGK494Q96LW2 274 aa10.63□□□□□ -0.71
CTNS-201ENST00000046640 TPSG1Q9NRR2 321 aa10.63□□□□□ -0.71
CTNS-201ENST00000046640 FBXL7Q9UJT9 491 aa10.63□□□□□ -0.71
CTNS-201ENST00000046640 ARHGAP32A7KAX9 2087 aa10.63□□□□□ -0.71
CTNS-201ENST00000046640 TRAV34A0A0B4J273 112 aa10.63□□□□□ -0.71
CTNS-201ENST00000046640 MT-CO2P00403 227 aa10.63□□□□□ -0.71
CTNS-201ENST00000046640 AMTP48728 403 aa10.63□□□□□ -0.71
CTNS-201ENST00000046640 SSBP2P81877 361 aaPredicted RBP10.63□□□□□ -0.71
CTNS-201ENST00000046640 C19orf35Q6ZS72 473 aa10.63□□□□□ -0.71
CTNS-201ENST00000046640 JKAMPQ9P055 326 aa10.63□□□□□ -0.71
CTNS-201ENST00000046640 V9GYV3 84 aa10.63□□□□□ -0.71
CTNS-201ENST00000046640 K7ENP7 123 aa10.63□□□□□ -0.71
CTNS-201ENST00000046640 ZNF833PQ6ZTB9 187 aa10.63□□□□□ -0.71
CTNS-201ENST00000046640 IGFBPL1Q8WX77 278 aa10.63□□□□□ -0.71
CTNS-201ENST00000046640 WNT10AQ9GZT5 417 aa10.63□□□□□ -0.71
CTNS-201ENST00000046640 IGHV3-21A0A0B4J1V1 117 aa10.62□□□□□ -0.71
CTNS-201ENST00000046640 SLC25A17O43808 307 aa10.62□□□□□ -0.71
CTNS-201ENST00000046640 LINC00869P0C866 280 aa10.62□□□□□ -0.71
CTNS-201ENST00000046640 LOXP28300 417 aaPredicted RBP10.62□□□□□ -0.71
CTNS-201ENST00000046640 DMRTA1Q5VZB9 504 aa10.62□□□□□ -0.71
CTNS-201ENST00000046640 LINC00574Q9H8X3 128 aa10.62□□□□□ -0.71
CTNS-201ENST00000046640 ZNF835Q9Y2P0 537 aa10.62□□□□□ -0.71
CTNS-201ENST00000046640 TBL2Q9Y4P3 447 aaKnown RBP10.62□□□□□ -0.71
CTNS-201ENST00000046640 COL12A1Q99715 3063 aa10.62□□□□□ -0.71
CTNS-201ENST00000046640 VSTM5A8MXK1 200 aa10.62□□□□□ -0.71
CTNS-201ENST00000046640 ZNF253O75346 499 aa10.62□□□□□ -0.71
CTNS-201ENST00000046640 RPL8P62917 257 aaKnown RBP10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms