RNA–Protein interactions for RNA: ENST00000011898.9

TSPAN9-201, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN9, Length 4,323 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-201ENST00000011898 RNASE7Q9H1E1 156 aaKnown RBP10.18□□□□□ -0.78
TSPAN9-201ENST00000011898 MRPS16Q9Y3D3 137 aaKnown RBP10.18□□□□□ -0.78
TSPAN9-201ENST00000011898 WFDC3Q8IUB2 231 aa10.18□□□□□ -0.78
TSPAN9-201ENST00000011898 STPG3Q8N7X2 389 aa10.18□□□□□ -0.78
TSPAN9-201ENST00000011898 OCC1Q8TAD7 63 aa10.18□□□□□ -0.78
TSPAN9-201ENST00000011898 VSTM2AQ8TAG5 236 aa10.18□□□□□ -0.78
TSPAN9-201ENST00000011898 TIMD4Q96H15 378 aa10.18□□□□□ -0.78
TSPAN9-201ENST00000011898 C18orf12Q96KH6 178 aa10.18□□□□□ -0.78
TSPAN9-201ENST00000011898 PRNDQ9UKY0 176 aa10.18□□□□□ -0.78
TSPAN9-201ENST00000011898 RRHO14718 337 aa10.17□□□□□ -0.78
TSPAN9-201ENST00000011898 MPDU1O75352 247 aa10.17□□□□□ -0.78
TSPAN9-201ENST00000011898 GPX1P07203 203 aa10.17□□□□□ -0.78
TSPAN9-201ENST00000011898 SCGB1A1P11684 91 aa10.17□□□□□ -0.78
TSPAN9-201ENST00000011898 AZU1P20160 251 aa10.17□□□□□ -0.78
TSPAN9-201ENST00000011898 CKS2P33552 79 aa10.17□□□□□ -0.78
TSPAN9-201ENST00000011898 TMPRSS3P57727 454 aa10.17□□□□□ -0.78
TSPAN9-201ENST00000011898 SRSF4Q08170 494 aaKnown RBP10.17□□□□□ -0.78
TSPAN9-201ENST00000011898 NRN1LQ496H8 165 aa10.17□□□□□ -0.78
TSPAN9-201ENST00000011898 HARBI1Q96MB7 349 aa10.17□□□□□ -0.78
TSPAN9-201ENST00000011898 DEPPQ9NTK1 212 aa10.17□□□□□ -0.78
TSPAN9-201ENST00000011898 K7EP13 123 aa10.17□□□□□ -0.78
TSPAN9-201ENST00000011898 WNT9BO14905 357 aa10.17□□□□□ -0.78
TSPAN9-201ENST00000011898 CFPP27918 469 aa10.17□□□□□ -0.78
TSPAN9-201ENST00000011898 GCHFRP30047 84 aa10.17□□□□□ -0.78
TSPAN9-201ENST00000011898 SSTR5P35346 364 aa10.17□□□□□ -0.78
TSPAN9-201ENST00000011898 TMEM249Q2WGJ8 235 aa10.17□□□□□ -0.78
TSPAN9-201ENST00000011898 GAGE13Q4V321 117 aa10.17□□□□□ -0.78
TSPAN9-201ENST00000011898 IGKV1-27A0A075B6S5 117 aa10.17□□□□□ -0.78
TSPAN9-201ENST00000011898 CD5LO43866 347 aa10.17□□□□□ -0.78
TSPAN9-201ENST00000011898 ZNF479Q96JC4 524 aa10.17□□□□□ -0.78
TSPAN9-201ENST00000011898 RAXQ9Y2V3 346 aa10.17□□□□□ -0.78
TSPAN9-201ENST00000011898 AMMECR1Q9Y4X0 333 aaPredicted RBP10.17□□□□□ -0.78
TSPAN9-201ENST00000011898 A0A1B0GW64 132 aa10.16□□□□□ -0.78
TSPAN9-201ENST00000011898 HERVK_113P61574 105 aa10.16□□□□□ -0.78
TSPAN9-201ENST00000011898 CCL8P80075 99 aa10.16□□□□□ -0.78
TSPAN9-201ENST00000011898 OR4F17Q8NGA8 305 aa10.16□□□□□ -0.78
TSPAN9-201ENST00000011898 PAXXQ9BUH6 204 aa10.16□□□□□ -0.78
TSPAN9-201ENST00000011898 IGF2RP11717 2491 aa10.16□□□□□ -0.78
TSPAN9-201ENST00000011898 RBP4P02753 201 aa10.16□□□□□ -0.78
TSPAN9-201ENST00000011898 IL6RP08887 468 aaPredicted RBP10.16□□□□□ -0.78
TSPAN9-201ENST00000011898 ID3Q02535 119 aa10.16□□□□□ -0.78
TSPAN9-201ENST00000011898 KLRB1Q12918 225 aa10.16□□□□□ -0.78
TSPAN9-201ENST00000011898 KRTCAP3Q53RY4 240 aa10.16□□□□□ -0.78
TSPAN9-201ENST00000011898 FAM90A2PQ658T7 463 aa10.16□□□□□ -0.78
TSPAN9-201ENST00000011898 ZNF525Q8N782 197 aa10.16□□□□□ -0.78
TSPAN9-201ENST00000011898 PCNX2A6NKB5 2137 aa10.16□□□□□ -0.78
TSPAN9-201ENST00000011898 NOTCH3Q9UM47 2321 aa10.16□□□□□ -0.78
TSPAN9-201ENST00000011898 FAM231BA6NCW3 169 aa10.16□□□□□ -0.78
TSPAN9-201ENST00000011898 C12orf77C9JDV5 145 aa10.16□□□□□ -0.78
TSPAN9-201ENST00000011898 APOHP02749 345 aaPredicted RBP10.16□□□□□ -0.78
TSPAN9-201ENST00000011898 HBBP68871 147 aa10.16□□□□□ -0.78
TSPAN9-201ENST00000011898 PRNTQ86SH4 94 aa10.16□□□□□ -0.78
TSPAN9-201ENST00000011898 ORM1P02763 201 aa10.16□□□□□ -0.78
TSPAN9-201ENST00000011898 ABHD12Q8N2K0 398 aa10.16□□□□□ -0.78
TSPAN9-201ENST00000011898 LRTM2Q8N967 370 aa10.16□□□□□ -0.78
TSPAN9-201ENST00000011898 FBXL7Q9UJT9 491 aa10.16□□□□□ -0.78
TSPAN9-201ENST00000011898 COL5A1P20908 1838 aaPredicted RBP10.15□□□□□ -0.78
TSPAN9-201ENST00000011898 PFN1P07737 140 aaKnown RBP10.15□□□□□ -0.78
TSPAN9-201ENST00000011898 FOXG1P55316 489 aaPredicted RBP10.15□□□□□ -0.78
TSPAN9-201ENST00000011898 TFF3Q07654 80 aa10.15□□□□□ -0.78
TSPAN9-201ENST00000011898 VKORC1L1Q8N0U8 176 aa10.15□□□□□ -0.78
TSPAN9-201ENST00000011898 TMEM160Q9NX00 188 aa10.15□□□□□ -0.78
TSPAN9-201ENST00000011898 TRAV9-1A0A075B6T8 112 aa10.15□□□□□ -0.78
TSPAN9-201ENST00000011898 REG1BP48304 166 aa10.15□□□□□ -0.78
TSPAN9-201ENST00000011898 CLDN18P56856 261 aa10.15□□□□□ -0.78
TSPAN9-201ENST00000011898 C10orf113Q5VZT2 155 aa10.15□□□□□ -0.78
TSPAN9-201ENST00000011898 DNM1P46Q6ZS02 220 aa10.15□□□□□ -0.78
TSPAN9-201ENST00000011898 NEUROG1Q92886 237 aa10.15□□□□□ -0.78
TSPAN9-201ENST00000011898 NPCDR1Q9BY65 106 aa10.15□□□□□ -0.78
TSPAN9-201ENST00000011898 SEPSECSQ9HD40 501 aaKnown RBP10.15□□□□□ -0.78
TSPAN9-201ENST00000011898 PGPA6NDG6 321 aa10.15□□□□□ -0.79
TSPAN9-201ENST00000011898 PRR31Q5SQ13 230 aa10.15□□□□□ -0.79
TSPAN9-201ENST00000011898 ADAMTSL5Q6ZMM2 481 aa10.15□□□□□ -0.79
TSPAN9-201ENST00000011898 Q6ZWC4 215 aa10.15□□□□□ -0.79
TSPAN9-201ENST00000011898 ITLN1Q8WWA0 313 aa10.15□□□□□ -0.79
TSPAN9-201ENST00000011898 CCL13Q99616 98 aa10.15□□□□□ -0.79
TSPAN9-201ENST00000011898 MCRIP2Q9BUT9 160 aaKnown RBP10.15□□□□□ -0.79
TSPAN9-201ENST00000011898 PLSCR4Q9NRQ2 329 aa10.15□□□□□ -0.79
TSPAN9-201ENST00000011898 ZNF581Q9P0T4 197 aa10.15□□□□□ -0.79
TSPAN9-201ENST00000011898 IFNL4K9M1U5 179 aa10.14□□□□□ -0.79
TSPAN9-201ENST00000011898 LYZP61626 148 aa10.14□□□□□ -0.79
TSPAN9-201ENST00000011898 PSG3Q16557 428 aa10.14□□□□□ -0.79
TSPAN9-201ENST00000011898 LINC01551Q86U37 167 aa10.14□□□□□ -0.79
TSPAN9-201ENST00000011898 SRSF8Q9BRL6 282 aaKnown RBP10.14□□□□□ -0.79
TSPAN9-201ENST00000011898 CGAP01215 116 aa10.14□□□□□ -0.79
TSPAN9-201ENST00000011898 LHX2P50458 406 aa10.14□□□□□ -0.79
TSPAN9-201ENST00000011898 RPL11P62913 178 aaKnown RBP10.14□□□□□ -0.79
TSPAN9-201ENST00000011898 LEAP2Q969E1 77 aa10.14□□□□□ -0.79
TSPAN9-201ENST00000011898 ZDHHC16Q969W1 377 aa10.14□□□□□ -0.79
TSPAN9-201ENST00000011898 CLEC7AQ9BXN2 247 aa10.14□□□□□ -0.79
TSPAN9-201ENST00000011898 LSM4Q9Y4Z0 139 aaKnown RBP10.14□□□□□ -0.79
TSPAN9-201ENST00000011898 OR11H12B2RN74 326 aa10.14□□□□□ -0.79
TSPAN9-201ENST00000011898 COX7A1P24310 79 aa10.14□□□□□ -0.79
TSPAN9-201ENST00000011898 FOXL1Q12952 345 aa10.14□□□□□ -0.79
TSPAN9-201ENST00000011898 PSG7Q13046 419 aa10.14□□□□□ -0.79
TSPAN9-201ENST00000011898 OR11H1Q8NG94 326 aa10.14□□□□□ -0.79
TSPAN9-201ENST00000011898 OR1L8Q8NGR8 309 aa10.14□□□□□ -0.79
TSPAN9-201ENST00000011898 OR11H2Q8NH07 326 aa10.14□□□□□ -0.79
TSPAN9-201ENST00000011898 XIRP2A4UGR9 3374 aa10.14□□□□□ -0.79
TSPAN9-201ENST00000011898 E9PLN8 166 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms