RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 P01803 113 aa8.02□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Defa5P28312 93 aa8.02□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Efnb2P52800 336 aa8.02□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Khdc1aQ3UWR2 166 aa8.02□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Znf511Q6P0X2 227 aa8.02□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Bud31Q6PGH1 103 aa8.02□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 C030005K15RikQ8BQN9 115 aa8.02□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Dusp18Q8VE01 188 aa8.02□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Gpx4Q91XR9 253 aa8.02□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Rab37Q9JKM7 223 aa8.02□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Sfrp4Q9Z1N6 351 aa8.02□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Myo10F8VQB6 2062 aa8.02□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Cst7O89098 144 aa8.02□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 P01806 116 aa8.02□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Mfge8P21956 463 aaKnown RBP8.02□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Klk1b26P36369 261 aa8.02□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Gm20816Q5FWD4 227 aa8.02□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 SepsecsQ6P6M7 504 aa8.02□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Aqp11Q8BHH1 271 aa8.02□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Mmp17Q9R0S3 578 aa8.02□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Ybx2Q9Z2C8 360 aaKnown RBP8.02□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 BcorQ8CGN4 1759 aa8.02□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Gm45753A0A1C7CYU8 86 aa8.01□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Tstd1E9PY03 133 aa8.01□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Olfr905L7N1X5 310 aa8.01□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 P01661 131 aa8.01□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 P01662 111 aa8.01□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 P01663 111 aa8.01□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 P01679 107 aa8.01□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Sf3b6P59708 125 aaKnown RBP8.01□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Tbx6P70327 436 aa8.01□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Ankrd33bQ3U0L2 486 aa8.01□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Olfr147Q60886 317 aa8.01□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Hes3Q61657 175 aa8.01□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Smug1Q6P5C5 279 aa8.01□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Flrt3Q8BGT1 649 aa8.01□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Dmrta1Q8CFG4 490 aa8.01□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Akirin1Q99LF1 191 aa8.01□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Tmem50bQ9D1X9 158 aa8.01□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Dynlrb2Q9DAJ5 96 aa8.01□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Kcne3Q9WTW2 103 aa8.01□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Ighv5-15A0A0A6YWC7 117 aa8.01□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Defa30E9QPZ2 93 aa8.01□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Olfr1331K7N684 317 aa8.01□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 CirbpP60824 172 aaKnown RBP8.01□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Crisp3Q03402 241 aa8.01□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Ctag2Q9D9S4 219 aa8.01□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Olfr1191-ps1A0A1L1STD5 311 aa8.01□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 C3ar1O09047 477 aa8.01□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Ren1P06281 402 aa8.01□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 PpicP30412 212 aaKnown RBP8.01□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 NcanP55066 1268 aa8.01□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Try10Q792Z1 246 aaKnown RBP8.01□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Gpr84Q8CIM5 396 aa8.01□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Tex37Q9DAG4 180 aa8.01□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Znf318Q99PP2 2237 aa8.01□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Ighv9-2A0A0B4J1J4 117 aa8.01□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Gm21874J3QNZ6 232 aa8.01□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Fgf12P61329 243 aa8.01□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Znf503Q7TMA2 652 aa8.01□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Ndufs8Q8K3J1 212 aa8.01□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Ssmem1Q9D9Y8 244 aa8.01□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 HikeshiQ9DD02 197 aa8.01□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 BlnkQ9QUN3 457 aa8.01□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Bcl2l2P70345 193 aa8□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 D1Ertd622eQ8VEB3 207 aa8□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Rhbdd2Q8VEK2 361 aa8□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Olfr1259Q8VEZ1 309 aa8□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Olfr1030Q8VFL5 318 aa8□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Gm44501A8R0T9 150 aa8□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Gm6812B1AXU1 112 aa8□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 1700020N15RikL7MTX3 112 aa8□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Tmem178bM0QWJ9 172 aa8□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 MyadmO35682 320 aaKnown RBP8□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Ascl1Q02067 231 aa8□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Msl2Q69ZF8 577 aa8□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Gm10190Q8BSD7 107 aa8□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 DapQ91XC8 102 aa8□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Gng10Q9CXP8 68 aa8□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Ramp3Q9WUP1 147 aa8□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 AplnrQ9WV08 377 aa8□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Slc25a53A2AF28 346 aa8□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Rag2P21784 527 aa8□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Prss48Q14B25 312 aa8□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Vstm2lQ6PDS0 220 aa8□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Ccsmst1Q6RUT7 136 aa8□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Klk15Q8CGR4 254 aa8□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 9230110F15RikQ9D262 117 aa8□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Olfr632Q9EPN9 317 aa8□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Suclg1Q9WUM5 346 aaKnown RBP8□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Alox12bO70582 701 aa8□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Pebp1P70296 187 aaKnown RBP8□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 A3galt2Q3V1N9 370 aa8□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Olfr823Q7TRH2 315 aa8□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Gltpd2Q8K0R6 321 aa8□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Chst1Q9EQC0 411 aa8□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 PigpQ9JHG1 132 aa8□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Esp4A8R0T8 117 aa7.99□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Dll3O88516 592 aa7.99□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Spsb2O88838 264 aa7.99□□□□□ -1.13
Retrieved 100 of 22,080 RNA–protein pairs in 28.6 ms