RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 MORN5Q5VZ52 161 aa11.27□□□□□ -0.61
PHGDH-233ENST00000642021 STUMQ69YW2 141 aa11.27□□□□□ -0.61
PHGDH-233ENST00000642021 BAGE3Q86Y29 109 aa11.27□□□□□ -0.61
PHGDH-233ENST00000642021 BAGE2Q86Y30 109 aa11.27□□□□□ -0.61
PHGDH-233ENST00000642021 SLC25A10Q9UBX3 287 aaPredicted RBP11.27□□□□□ -0.61
PHGDH-233ENST00000642021 IL19Q9UHD0 177 aa11.27□□□□□ -0.61
PHGDH-233ENST00000642021 MAP1BP46821 2468 aaKnown RBP11.27□□□□□ -0.61
PHGDH-233ENST00000642021 IGLV3-9A0A075B6K5 115 aa11.27□□□□□ -0.61
PHGDH-233ENST00000642021 TRAV9-1A0A075B6T8 112 aa11.27□□□□□ -0.61
PHGDH-233ENST00000642021 MBD3L4A6NDZ8 208 aaPredicted RBP11.27□□□□□ -0.61
PHGDH-233ENST00000642021 MBD3L3A6NE82 208 aaPredicted RBP11.27□□□□□ -0.61
PHGDH-233ENST00000642021 MBD3L5A6NJ08 208 aaPredicted RBP11.27□□□□□ -0.61
PHGDH-233ENST00000642021 TCL1AP56279 114 aa11.27□□□□□ -0.61
PHGDH-233ENST00000642021 SUMO1P63165 101 aaKnown RBP11.27□□□□□ -0.61
PHGDH-233ENST00000642021 PAFAH1B2P68402 229 aa11.27□□□□□ -0.61
PHGDH-233ENST00000642021 DEFB109BQ30KR1 87 aa11.27□□□□□ -0.61
PHGDH-233ENST00000642021 MBD3L2Q8NHZ7 208 aaPredicted RBP11.27□□□□□ -0.61
PHGDH-233ENST00000642021 RNF7Q9UBF6 113 aa11.27□□□□□ -0.61
PHGDH-233ENST00000642021 PRNDQ9UKY0 176 aa11.27□□□□□ -0.61
PHGDH-233ENST00000642021 YLPM1P49750 1951 aaKnown RBP11.27□□□□□ -0.61
PHGDH-233ENST00000642021 CNOT1A5YKK6 2376 aaKnown RBP11.26□□□□□ -0.61
PHGDH-233ENST00000642021 A6NNC1 897 aa11.26□□□□□ -0.61
PHGDH-233ENST00000642021 TCF21O43680 179 aa11.26□□□□□ -0.61
PHGDH-233ENST00000642021 IGLV2-8P01709 118 aa11.26□□□□□ -0.61
PHGDH-233ENST00000642021 Q5PR19 223 aa11.26□□□□□ -0.61
PHGDH-233ENST00000642021 GNB4Q9HAV0 340 aa11.26□□□□□ -0.61
PHGDH-233ENST00000642021 SLC35D1Q9NTN3 355 aa11.26□□□□□ -0.61
PHGDH-233ENST00000642021 ROS1P08922 2347 aa11.26□□□□□ -0.61
PHGDH-233ENST00000642021 TRAV5A0A0B4J249 113 aa11.26□□□□□ -0.61
PHGDH-233ENST00000642021 E7EUB6 86 aa11.26□□□□□ -0.61
PHGDH-233ENST00000642021 M0R143 59 aa11.26□□□□□ -0.61
PHGDH-233ENST00000642021 IGHV1-46P01743 117 aa11.26□□□□□ -0.61
PHGDH-233ENST00000642021 COMPP49747 757 aaPredicted RBP11.26□□□□□ -0.61
PHGDH-233ENST00000642021 TIMM23BQ5SRD1 257 aa11.26□□□□□ -0.61
PHGDH-233ENST00000642021 TMEM167BQ9NRX6 74 aa11.26□□□□□ -0.61
PHGDH-233ENST00000642021 TECRQ9NZ01 308 aaKnown RBP11.26□□□□□ -0.61
PHGDH-233ENST00000642021 SPAARA0A1B0GVQ0 90 aa11.25□□□□□ -0.61
PHGDH-233ENST00000642021 TMEM238C9JI98 176 aa11.25□□□□□ -0.61
PHGDH-233ENST00000642021 FNDC10F2Z333 226 aa11.25□□□□□ -0.61
PHGDH-233ENST00000642021 SAA1P0DJI8 122 aaPredicted RBP11.25□□□□□ -0.61
PHGDH-233ENST00000642021 GATA4P43694 442 aa11.25□□□□□ -0.61
PHGDH-233ENST00000642021 Q0VG73 95 aa11.25□□□□□ -0.61
PHGDH-233ENST00000642021 ZNF705AQ6ZN79 300 aaPredicted RBP11.25□□□□□ -0.61
PHGDH-233ENST00000642021 TEX43Q6ZNM6 134 aa11.25□□□□□ -0.61
PHGDH-233ENST00000642021 SLC25A48Q6ZT89 311 aaKnown RBP11.25□□□□□ -0.61
PHGDH-233ENST00000642021 NUDT10Q8NFP7 164 aa11.25□□□□□ -0.61
PHGDH-233ENST00000642021 OR5AU1Q8NGC0 362 aa11.25□□□□□ -0.61
PHGDH-233ENST00000642021 VN1R17PQ8TDU5 208 aa11.25□□□□□ -0.61
PHGDH-233ENST00000642021 CORO2AQ92828 525 aa11.25□□□□□ -0.61
PHGDH-233ENST00000642021 ADTRPQ96IZ2 230 aa11.25□□□□□ -0.61
PHGDH-233ENST00000642021 LINC00479Q96M42 142 aa11.25□□□□□ -0.61
PHGDH-233ENST00000642021 SFXN3Q9BWM7 321 aa11.25□□□□□ -0.61
PHGDH-233ENST00000642021 NAT8BQ9UHF3 227 aa11.25□□□□□ -0.61
PHGDH-233ENST00000642021 ZNF257Q9Y2Q1 563 aa11.25□□□□□ -0.61
PHGDH-233ENST00000642021 FAM215AQ9Y5M1 114 aa11.25□□□□□ -0.61
PHGDH-233ENST00000642021 RNASE2P10153 161 aaKnown RBP11.25□□□□□ -0.61
PHGDH-233ENST00000642021 TDGF1P3P51864 188 aa11.25□□□□□ -0.61
PHGDH-233ENST00000642021 CX3CL1P78423 397 aa11.25□□□□□ -0.61
PHGDH-233ENST00000642021 TNFAIP6P98066 277 aaPredicted RBP11.25□□□□□ -0.61
PHGDH-233ENST00000642021 OR2T6Q8NHC8 308 aa11.25□□□□□ -0.61
PHGDH-233ENST00000642021 DMXL2Q8TDJ6 3036 aa11.25□□□□□ -0.61
PHGDH-233ENST00000642021 FAM103A1Q9BTL3 118 aaKnown RBP11.25□□□□□ -0.61
PHGDH-233ENST00000642021 GNB1LQ9BYB4 327 aa11.25□□□□□ -0.61
PHGDH-233ENST00000642021 RPUSD1Q9UJJ7 312 aaKnown RBP11.25□□□□□ -0.61
PHGDH-233ENST00000642021 PAM16Q9Y3D7 125 aa11.25□□□□□ -0.61
PHGDH-233ENST00000642021 CA1P00915 261 aaPredicted RBP11.24□□□□□ -0.61
PHGDH-233ENST00000642021 SSBP2P81877 361 aaPredicted RBP11.24□□□□□ -0.61
PHGDH-233ENST00000642021 ZNF788Q6ZQV5 615 aa11.24□□□□□ -0.61
PHGDH-233ENST00000642021 NHLRC2Q8NBF2 726 aa11.24□□□□□ -0.61
PHGDH-233ENST00000642021 SLC25A33Q9BSK2 321 aa11.24□□□□□ -0.61
PHGDH-233ENST00000642021 FBXL7Q9UJT9 491 aa11.24□□□□□ -0.61
PHGDH-233ENST00000642021 CEP250Q9BV73 2442 aa11.24□□□□□ -0.61
PHGDH-233ENST00000642021 OR5G3P0C626 314 aa11.24□□□□□ -0.61
PHGDH-233ENST00000642021 RANP62826 216 aaKnown RBP11.24□□□□□ -0.61
PHGDH-233ENST00000642021 C2orf83Q53S99 150 aa11.24□□□□□ -0.61
PHGDH-233ENST00000642021 TMEM136Q6ZRR5 245 aa11.24□□□□□ -0.61
PHGDH-233ENST00000642021 SMIM15Q7Z3B0 74 aa11.24□□□□□ -0.61
PHGDH-233ENST00000642021 DEFB124Q8NES8 71 aa11.24□□□□□ -0.61
PHGDH-233ENST00000642021 RCHY1Q96PM5 261 aa11.24□□□□□ -0.61
PHGDH-233ENST00000642021 SAMD10Q9BYL1 202 aa11.24□□□□□ -0.61
PHGDH-233ENST00000642021 GSX1Q9H4S2 264 aaPredicted RBP11.24□□□□□ -0.61
PHGDH-233ENST00000642021 ADGRG4Q8IZF6 3080 aa11.24□□□□□ -0.61
PHGDH-233ENST00000642021 FAM27E3Q08E93 113 aa11.23□□□□□ -0.61
PHGDH-233ENST00000642021 FAM168AQ92567 244 aa11.23□□□□□ -0.61
PHGDH-233ENST00000642021 LINC00574Q9H8X3 128 aa11.23□□□□□ -0.61
PHGDH-233ENST00000642021 M0QZK8 103 aa11.23□□□□□ -0.61
PHGDH-233ENST00000642021 IGHV3-48P01763 117 aa11.23□□□□□ -0.61
PHGDH-233ENST00000642021 GPX1P07203 203 aa11.23□□□□□ -0.61
PHGDH-233ENST00000642021 TIGITQ495A1 244 aa11.23□□□□□ -0.61
PHGDH-233ENST00000642021 MRPL54Q6P161 138 aaKnown RBP11.23□□□□□ -0.61
PHGDH-233ENST00000642021 ZCCHC24Q8N2G6 241 aaKnown RBP11.23□□□□□ -0.61
PHGDH-233ENST00000642021 FAM167A-AS1Q96KT0 104 aa11.23□□□□□ -0.61
PHGDH-233ENST00000642021 OSTCQ9NRP0 149 aa11.23□□□□□ -0.61
PHGDH-233ENST00000642021 ARL2-SNX15V9GYD0 113 aa11.23□□□□□ -0.61
PHGDH-233ENST00000642021 CBY3A6NI87 242 aa11.22□□□□□ -0.61
PHGDH-233ENST00000642021 MGST1P10620 155 aaKnown RBP11.22□□□□□ -0.61
PHGDH-233ENST00000642021 CD69Q07108 199 aa11.22□□□□□ -0.61
PHGDH-233ENST00000642021 RTL8BQ17RB0 113 aa11.22□□□□□ -0.61
PHGDH-233ENST00000642021 RNF151Q2KHN1 245 aa11.22□□□□□ -0.61
PHGDH-233ENST00000642021 TNFRSF14Q92956 283 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms