RNA–Protein interactions for RNA: ENST00000641899.1

SRRM4-204, Transcript of serine/arginine repetitive matrix 4, humanhuman

Gene SRRM4, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-204ENST00000641899 CCL28Q9NRJ3 127 aa10.93□□□□□ -0.66
SRRM4-204ENST00000641899 CCDC59Q9P031 241 aaKnown RBP10.93□□□□□ -0.66
SRRM4-204ENST00000641899 DNAH6Q9C0G6 4158 aa10.93□□□□□ -0.66
SRRM4-204ENST00000641899 IGHV3-49A0A0A0MS15 119 aa10.92□□□□□ -0.66
SRRM4-204ENST00000641899 TRAV3A0A0B4J244 114 aa10.92□□□□□ -0.66
SRRM4-204ENST00000641899 TEX50A0A1B0GTY4 177 aa10.92□□□□□ -0.66
SRRM4-204ENST00000641899 RBMY1A1P0DJD3 496 aaKnown RBP10.92□□□□□ -0.66
SRRM4-204ENST00000641899 RBMY1CP0DJD4 496 aa10.92□□□□□ -0.66
SRRM4-204ENST00000641899 FCGR2CP31995 323 aa10.92□□□□□ -0.66
SRRM4-204ENST00000641899 RBMY1FQ15415 496 aaKnown RBP10.92□□□□□ -0.66
SRRM4-204ENST00000641899 AADACL3Q5VUY0 350 aa10.92□□□□□ -0.66
SRRM4-204ENST00000641899 TPRA1Q86W33 373 aa10.92□□□□□ -0.66
SRRM4-204ENST00000641899 OR1P1Q8NH06 330 aa10.92□□□□□ -0.66
SRRM4-204ENST00000641899 SLC5A7Q9GZV3 580 aa10.92□□□□□ -0.66
SRRM4-204ENST00000641899 MS4A6AQ9H2W1 248 aa10.92□□□□□ -0.66
SRRM4-204ENST00000641899 NDUFA4L2Q9NRX3 87 aa10.92□□□□□ -0.66
SRRM4-204ENST00000641899 TMEM14BQ9NUH8 114 aa10.92□□□□□ -0.66
SRRM4-204ENST00000641899 NDUFB11Q9NX14 153 aa10.92□□□□□ -0.66
SRRM4-204ENST00000641899 PRNDQ9UKY0 176 aa10.92□□□□□ -0.66
SRRM4-204ENST00000641899 TBC1D24Q9ULP9 559 aa10.92□□□□□ -0.66
SRRM4-204ENST00000641899 SSR3Q9UNL2 185 aa10.92□□□□□ -0.66
SRRM4-204ENST00000641899 PKHD1P08F94 4074 aa10.91□□□□□ -0.66
SRRM4-204ENST00000641899 FAT2Q9NYQ8 4349 aa10.91□□□□□ -0.66
SRRM4-204ENST00000641899 A0A1B0GVG6 124 aa10.91□□□□□ -0.66
SRRM4-204ENST00000641899 A0A1W2PS18 150 aa10.91□□□□□ -0.66
SRRM4-204ENST00000641899 ZNF705EA8MWA4 302 aaPredicted RBP10.91□□□□□ -0.66
SRRM4-204ENST00000641899 K7EIM0 57 aa10.91□□□□□ -0.66
SRRM4-204ENST00000641899 GNG7O60262 68 aa10.91□□□□□ -0.66
SRRM4-204ENST00000641899 PPYP01298 95 aa10.91□□□□□ -0.66
SRRM4-204ENST00000641899 OR51H1Q8NH63 302 aa10.91□□□□□ -0.66
SRRM4-204ENST00000641899 NUDCD2Q8WVJ2 157 aa10.91□□□□□ -0.66
SRRM4-204ENST00000641899 SLC25A46Q96AG3 418 aa10.91□□□□□ -0.66
SRRM4-204ENST00000641899 NARS2Q96I59 477 aaKnown RBP10.91□□□□□ -0.66
SRRM4-204ENST00000641899 GPHA2Q96T91 129 aa10.91□□□□□ -0.66
SRRM4-204ENST00000641899 SLIRPQ9GZT3 109 aaKnown RBP10.91□□□□□ -0.66
SRRM4-204ENST00000641899 NXF2Q9GZY0 626 aaKnown RBP10.91□□□□□ -0.66
SRRM4-204ENST00000641899 RABAC1Q9UI14 185 aa10.91□□□□□ -0.66
SRRM4-204ENST00000641899 ELF5Q9UKW6 265 aaPredicted RBP10.91□□□□□ -0.66
SRRM4-204ENST00000641899 OR51B2Q9Y5P1 312 aa10.91□□□□□ -0.66
SRRM4-204ENST00000641899 TMEM235A6NFC5 223 aa10.9□□□□□ -0.66
SRRM4-204ENST00000641899 MARCH11A6NNE9 402 aa10.9□□□□□ -0.66
SRRM4-204ENST00000641899 F8W735 103 aaPredicted RBP10.9□□□□□ -0.66
SRRM4-204ENST00000641899 SCGB2A1O75556 95 aa10.9□□□□□ -0.66
SRRM4-204ENST00000641899 OR10A3P58181 314 aa10.9□□□□□ -0.66
SRRM4-204ENST00000641899 NUTF2P61970 127 aaKnown RBP10.9□□□□□ -0.66
SRRM4-204ENST00000641899 CADM3Q8N126 398 aa10.9□□□□□ -0.66
SRRM4-204ENST00000641899 BEST4Q8NFU0 473 aa10.9□□□□□ -0.66
SRRM4-204ENST00000641899 MISP3Q96FF7 219 aa10.9□□□□□ -0.66
SRRM4-204ENST00000641899 FAM210BQ96KR6 192 aa10.9□□□□□ -0.66
SRRM4-204ENST00000641899 C1QTNF4Q9BXJ3 329 aa10.9□□□□□ -0.66
SRRM4-204ENST00000641899 RNF167Q9H6Y7 350 aa10.9□□□□□ -0.66
SRRM4-204ENST00000641899 DNAH2Q9P225 4427 aa10.9□□□□□ -0.66
SRRM4-204ENST00000641899 IGHV3OR16-13A0A075B7E8 117 aa10.89□□□□□ -0.67
SRRM4-204ENST00000641899 IGHV3-74A0A0B4J1X5 117 aa10.89□□□□□ -0.67
SRRM4-204ENST00000641899 S100A5P33763 92 aa10.89□□□□□ -0.67
SRRM4-204ENST00000641899 EIF2B2P49770 351 aaKnown RBP10.89□□□□□ -0.67
SRRM4-204ENST00000641899 FXYD4P59646 89 aa10.89□□□□□ -0.67
SRRM4-204ENST00000641899 GRAMD2BQ96HH9 432 aa10.89□□□□□ -0.67
SRRM4-204ENST00000641899 VSIRQ9H7M9 311 aa10.89□□□□□ -0.67
SRRM4-204ENST00000641899 DNAH11Q96DT5 4516 aa10.88□□□□□ -0.67
SRRM4-204ENST00000641899 NPBWR1P48145 328 aa10.88□□□□□ -0.67
SRRM4-204ENST00000641899 HERV-K104P61576 105 aa10.88□□□□□ -0.67
SRRM4-204ENST00000641899 C1orf134Q5TEV5 83 aa10.88□□□□□ -0.67
SRRM4-204ENST00000641899 TRPT1Q86TN4 253 aaKnown RBP10.88□□□□□ -0.67
SRRM4-204ENST00000641899 ST8SIA2Q92186 375 aa10.88□□□□□ -0.67
SRRM4-204ENST00000641899 ZNF414Q96IQ9 312 aa10.88□□□□□ -0.67
SRRM4-204ENST00000641899 ELOA3CA0A087WX78 387 aaPredicted RBP10.87□□□□□ -0.67
SRRM4-204ENST00000641899 KRASP01116 189 aa10.87□□□□□ -0.67
SRRM4-204ENST00000641899 F2RP25116 425 aa10.87□□□□□ -0.67
SRRM4-204ENST00000641899 C12orf74Q32Q52 190 aa10.87□□□□□ -0.67
SRRM4-204ENST00000641899 ZNF575Q86XF7 245 aa10.87□□□□□ -0.67
SRRM4-204ENST00000641899 CMTM1Q8IZ96 169 aa10.87□□□□□ -0.67
SRRM4-204ENST00000641899 MOB3AQ96BX8 217 aa10.87□□□□□ -0.67
SRRM4-204ENST00000641899 TXNL4BQ9NX01 149 aaKnown RBP10.87□□□□□ -0.67
SRRM4-204ENST00000641899 DAPK2Q9UIK4 370 aa10.87□□□□□ -0.67
SRRM4-204ENST00000641899 TEX48A0A1B0GUV7 120 aa10.86□□□□□ -0.67
SRRM4-204ENST00000641899 NOTOA8MTQ0 251 aa10.86□□□□□ -0.67
SRRM4-204ENST00000641899 CDK2AP2O75956 126 aa10.86□□□□□ -0.67
SRRM4-204ENST00000641899 MT-CO2P00403 227 aa10.86□□□□□ -0.67
SRRM4-204ENST00000641899 NPPCP23582 126 aa10.86□□□□□ -0.67
SRRM4-204ENST00000641899 S100GP29377 79 aa10.86□□□□□ -0.67
SRRM4-204ENST00000641899 RORCP51449 518 aa10.86□□□□□ -0.67
SRRM4-204ENST00000641899 RGS21Q2M5E4 152 aa10.86□□□□□ -0.67
SRRM4-204ENST00000641899 TOMM20LQ6UXN7 152 aa10.86□□□□□ -0.67
SRRM4-204ENST00000641899 ZNF600Q6ZNG1 722 aa10.86□□□□□ -0.67
SRRM4-204ENST00000641899 ZNF818PQ6ZRF7 136 aa10.86□□□□□ -0.67
SRRM4-204ENST00000641899 TMEM17Q86X19 198 aa10.86□□□□□ -0.67
SRRM4-204ENST00000641899 STXBP6Q8NFX7 210 aa10.86□□□□□ -0.67
SRRM4-204ENST00000641899 PINX1Q96BK5 328 aaKnown RBP10.86□□□□□ -0.67
SRRM4-204ENST00000641899 X6R8D5 127 aa10.86□□□□□ -0.67
SRRM4-204ENST00000641899 hCG_2014768A0A024R1R8 64 aa10.85□□□□□ -0.67
SRRM4-204ENST00000641899 IGLV2-18A0A075B6J9 118 aa10.85□□□□□ -0.67
SRRM4-204ENST00000641899 TRDV1A0A1B0GX56 115 aa10.85□□□□□ -0.67
SRRM4-204ENST00000641899 TMEM189A5PLL7 270 aa10.85□□□□□ -0.67
SRRM4-204ENST00000641899 C16orf90A8MZG2 172 aa10.85□□□□□ -0.67
SRRM4-204ENST00000641899 I3L2K1 104 aa10.85□□□□□ -0.67
SRRM4-204ENST00000641899 SSX5O60225 188 aa10.85□□□□□ -0.67
SRRM4-204ENST00000641899 SPART-AS1P0CW21 52 aa10.85□□□□□ -0.67
SRRM4-204ENST00000641899 RPS19P39019 145 aaKnown RBP10.85□□□□□ -0.67
SRRM4-204ENST00000641899 CBX5P45973 191 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms