RNA–Protein interactions for RNA: ENST00000641811.1

PHGDH-227, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,031 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-227ENST00000641811 PINX1Q96BK5 328 aaKnown RBP13.13□□□□□ -0.31
PHGDH-227ENST00000641811 SLC25A21Q9BQT8 299 aaPredicted RBP13.13□□□□□ -0.31
PHGDH-227ENST00000641811 COL7A1Q02388 2944 aa13.12□□□□□ -0.31
PHGDH-227ENST00000641811 INS-IGF2F8WCM5 200 aa13.12□□□□□ -0.31
PHGDH-227ENST00000641811 MT-CO2P00403 227 aa13.12□□□□□ -0.31
PHGDH-227ENST00000641811 IL7P13232 177 aa13.12□□□□□ -0.31
PHGDH-227ENST00000641811 SPCS3P61009 180 aa13.12□□□□□ -0.31
PHGDH-227ENST00000641811 TM4SF20Q53R12 229 aa13.12□□□□□ -0.31
PHGDH-227ENST00000641811 Q56UQ5 140 aa13.12□□□□□ -0.31
PHGDH-227ENST00000641811 TMEM128Q5BJH2 165 aa13.12□□□□□ -0.31
PHGDH-227ENST00000641811 C11orf87Q6NUJ2 197 aa13.12□□□□□ -0.31
PHGDH-227ENST00000641811 B9D2Q9BPU9 175 aa13.12□□□□□ -0.31
PHGDH-227ENST00000641811 ENY2Q9NPA8 101 aa13.12□□□□□ -0.31
PHGDH-227ENST00000641811 A0A0B4J2A0 478 aa13.11□□□□□ -0.31
PHGDH-227ENST00000641811 TMEM213A2RRL7 107 aa13.11□□□□□ -0.31
PHGDH-227ENST00000641811 A6NHS1 94 aa13.11□□□□□ -0.31
PHGDH-227ENST00000641811 RNASE2P10153 161 aaKnown RBP13.11□□□□□ -0.31
PHGDH-227ENST00000641811 ANXA3P12429 323 aa13.11□□□□□ -0.31
PHGDH-227ENST00000641811 VAMP1P23763 118 aa13.11□□□□□ -0.31
PHGDH-227ENST00000641811 ADMP35318 185 aa13.11□□□□□ -0.31
PHGDH-227ENST00000641811 CD69Q07108 199 aa13.11□□□□□ -0.31
PHGDH-227ENST00000641811 DCTN2Q13561 401 aaKnown RBP13.11□□□□□ -0.31
PHGDH-227ENST00000641811 ANKRD55Q3KP44 614 aa13.11□□□□□ -0.31
PHGDH-227ENST00000641811 CD300EQ496F6 205 aaPredicted RBP13.11□□□□□ -0.31
PHGDH-227ENST00000641811 NMSQ5H8A3 153 aa13.11□□□□□ -0.31
PHGDH-227ENST00000641811 LGI3Q8N145 548 aa13.11□□□□□ -0.31
PHGDH-227ENST00000641811 BSCL2Q96G97 398 aaPredicted RBP13.11□□□□□ -0.31
PHGDH-227ENST00000641811 SHPKQ9UHJ6 478 aa13.11□□□□□ -0.31
PHGDH-227ENST00000641811 IGHV3OR16-8A0A075B7F1 116 aa13.1□□□□□ -0.31
PHGDH-227ENST00000641811 NAP1L6A6NFF2 107 aa13.1□□□□□ -0.31
PHGDH-227ENST00000641811 CTSGP08311 255 aa13.1□□□□□ -0.31
PHGDH-227ENST00000641811 SULT1A3P0DMM9 295 aa13.1□□□□□ -0.31
PHGDH-227ENST00000641811 SULT1A4P0DMN0 295 aa13.1□□□□□ -0.31
PHGDH-227ENST00000641811 CBLN1P23435 193 aa13.1□□□□□ -0.31
PHGDH-227ENST00000641811 MFAP4P55083 255 aa13.1□□□□□ -0.31
PHGDH-227ENST00000641811 PPP1R1AQ13522 171 aa13.1□□□□□ -0.31
PHGDH-227ENST00000641811 RBMS2Q15434 407 aaKnown RBP13.1□□□□□ -0.31
PHGDH-227ENST00000641811 DEFB114Q30KQ6 69 aa13.1□□□□□ -0.31
PHGDH-227ENST00000641811 CNPY1Q3B7I2 92 aa13.1□□□□□ -0.31
PHGDH-227ENST00000641811 CENPSQ8N2Z9 138 aa13.1□□□□□ -0.31
PHGDH-227ENST00000641811 OR52E5Q8NH55 327 aa13.1□□□□□ -0.31
PHGDH-227ENST00000641811 DYNLRB2Q8TF09 96 aa13.1□□□□□ -0.31
PHGDH-227ENST00000641811 ZNF436Q9C0F3 470 aaPredicted RBP13.1□□□□□ -0.31
PHGDH-227ENST00000641811 FLVCR2Q9UPI3 526 aa13.1□□□□□ -0.31
PHGDH-227ENST00000641811 SMAD5-AS1Q9Y6J3 95 aa13.1□□□□□ -0.31
PHGDH-227ENST00000641811 CEBPZOSA8MTT3 80 aa13.09□□□□□ -0.31
PHGDH-227ENST00000641811 A8MWP6 167 aa13.09□□□□□ -0.31
PHGDH-227ENST00000641811 BTCP35070 178 aa13.09□□□□□ -0.31
PHGDH-227ENST00000641811 SRPXP78539 464 aa13.09□□□□□ -0.31
PHGDH-227ENST00000641811 PVRIGQ6DKI7 326 aa13.09□□□□□ -0.31
PHGDH-227ENST00000641811 LCN12Q6JVE5 192 aa13.09□□□□□ -0.31
PHGDH-227ENST00000641811 SPSB3Q6PJ21 355 aa13.09□□□□□ -0.31
PHGDH-227ENST00000641811 Q8N1Y9 231 aa13.09□□□□□ -0.31
PHGDH-227ENST00000641811 UXS1Q8NBZ7 420 aa13.09□□□□□ -0.31
PHGDH-227ENST00000641811 ZNF414Q96IQ9 312 aa13.09□□□□□ -0.31
PHGDH-227ENST00000641811 ATP6V0BQ99437 205 aa13.09□□□□□ -0.31
PHGDH-227ENST00000641811 HEYLQ9NQ87 328 aaPredicted RBP13.09□□□□□ -0.31
PHGDH-227ENST00000641811 NDUFB6O95139 128 aa13.08□□□□□ -0.32
PHGDH-227ENST00000641811 SFT2D2O95562 160 aa13.08□□□□□ -0.32
PHGDH-227ENST00000641811 SUB1P53999 127 aaKnown RBP eCLIP13.08□□□□□ -0.32
PHGDH-227ENST00000641811 SMCO1Q147U7 214 aa13.08□□□□□ -0.32
PHGDH-227ENST00000641811 MLANAQ16655 118 aa13.08□□□□□ -0.32
PHGDH-227ENST00000641811 BSXQ3C1V8 233 aa13.08□□□□□ -0.32
PHGDH-227ENST00000641811 TMEM190Q8WZ59 177 aa13.08□□□□□ -0.32
PHGDH-227ENST00000641811 ASCL2Q99929 193 aa13.08□□□□□ -0.32
PHGDH-227ENST00000641811 MLXQ9UH92 298 aa13.08□□□□□ -0.32
PHGDH-227ENST00000641811 ZNF785A8K8V0 405 aa13.07□□□□□ -0.32
PHGDH-227ENST00000641811 CENPXA8MT69 81 aa13.07□□□□□ -0.32
PHGDH-227ENST00000641811 PLA2G10O15496 165 aa13.07□□□□□ -0.32
PHGDH-227ENST00000641811 OR2K2Q8NGT1 345 aa13.07□□□□□ -0.32
PHGDH-227ENST00000641811 TXN2Q99757 166 aa13.07□□□□□ -0.32
PHGDH-227ENST00000641811 C20orf24Q9BUV8 137 aa13.07□□□□□ -0.32
PHGDH-227ENST00000641811 FNDC4Q9H6D8 234 aaPredicted RBP13.07□□□□□ -0.32
PHGDH-227ENST00000641811 PALMDQ9NP74 551 aa13.07□□□□□ -0.32
PHGDH-227ENST00000641811 MRPL36Q9P0J6 103 aaKnown RBP13.07□□□□□ -0.32
PHGDH-227ENST00000641811 UFC1Q9Y3C8 167 aa13.07□□□□□ -0.32
PHGDH-227ENST00000641811 NDUFA4O00483 81 aa13.06□□□□□ -0.32
PHGDH-227ENST00000641811 NUPL2O15504 423 aaKnown RBP13.06□□□□□ -0.32
PHGDH-227ENST00000641811 ZNF207O43670 478 aaKnown RBP13.06□□□□□ -0.32
PHGDH-227ENST00000641811 GNG7O60262 68 aa13.06□□□□□ -0.32
PHGDH-227ENST00000641811 FCGR2BP31994 310 aaPredicted RBP13.06□□□□□ -0.32
PHGDH-227ENST00000641811 TNFRSF9Q07011 255 aa13.06□□□□□ -0.32
PHGDH-227ENST00000641811 BTNL8Q6UX41 500 aa13.06□□□□□ -0.32
PHGDH-227ENST00000641811 LRTM2Q8N967 370 aa13.06□□□□□ -0.32
PHGDH-227ENST00000641811 WDR89Q96FK6 387 aaPredicted RBP13.06□□□□□ -0.32
PHGDH-227ENST00000641811 C7orf50Q9BRJ6 194 aaKnown RBP13.06□□□□□ -0.32
PHGDH-227ENST00000641811 RBKSQ9H477 322 aa13.06□□□□□ -0.32
PHGDH-227ENST00000641811 GAR1Q9NY12 217 aaKnown RBP13.06□□□□□ -0.32
PHGDH-227ENST00000641811 TECRQ9NZ01 308 aaKnown RBP13.06□□□□□ -0.32
PHGDH-227ENST00000641811 HSPB7Q9UBY9 170 aa13.06□□□□□ -0.32
PHGDH-227ENST00000641811 A0A1B0GU03 582 aa13.05□□□□□ -0.32
PHGDH-227ENST00000641811 FRMD6-AS1P0C7T7 363 aa13.05□□□□□ -0.32
PHGDH-227ENST00000641811 C8orf88P0DMB2 117 aa13.05□□□□□ -0.32
PHGDH-227ENST00000641811 HTR2BP41595 481 aa13.05□□□□□ -0.32
PHGDH-227ENST00000641811 ELLP55199 621 aaPredicted RBP13.05□□□□□ -0.32
PHGDH-227ENST00000641811 GUCA2BQ16661 112 aa13.05□□□□□ -0.32
PHGDH-227ENST00000641811 TMEM61Q8N0U2 210 aa13.05□□□□□ -0.32
PHGDH-227ENST00000641811 DUSP18Q8NEJ0 188 aa13.05□□□□□ -0.32
PHGDH-227ENST00000641811 OR1S1Q8NH92 325 aa13.05□□□□□ -0.32
PHGDH-227ENST00000641811 TMEM170AQ8WVE7 144 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms