RNA–Protein interactions for RNA: ENST00000640652.1

SCN3A-210, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5

Gene SCN3A, Length 8,825 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-210ENST00000640652 NCOR1P1Q9H4R4 102 aa4.62□□□□□ -1.67
SCN3A-210ENST00000640652 PLA2G2EQ9NZK7 142 aa4.62□□□□□ -1.67
SCN3A-210ENST00000640652 LINC00473A8K010 186 aa4.62□□□□□ -1.67
SCN3A-210ENST00000640652 SERF1AO75920 110 aa4.62□□□□□ -1.67
SCN3A-210ENST00000640652 OR9G9P0C7N8 305 aa4.62□□□□□ -1.67
SCN3A-210ENST00000640652 GATA4P43694 442 aa4.62□□□□□ -1.67
SCN3A-210ENST00000640652 CAMPP49913 170 aa4.62□□□□□ -1.67
SCN3A-210ENST00000640652 TMPRSS3P57727 454 aa4.62□□□□□ -1.67
SCN3A-210ENST00000640652 ATP5L2Q7Z4Y8 100 aa4.62□□□□□ -1.67
SCN3A-210ENST00000640652 ZNF738Q8NE65 137 aa4.62□□□□□ -1.67
SCN3A-210ENST00000640652 EAF1Q96JC9 268 aaPredicted RBP4.62□□□□□ -1.67
SCN3A-210ENST00000640652 ZNF835Q9Y2P0 537 aa4.62□□□□□ -1.67
SCN3A-210ENST00000640652 RFNGQ9Y644 331 aa4.62□□□□□ -1.67
SCN3A-210ENST00000640652 F2RL2O00254 374 aa4.62□□□□□ -1.67
SCN3A-210ENST00000640652 ORM2P19652 201 aa4.62□□□□□ -1.67
SCN3A-210ENST00000640652 HTR1DP28221 377 aa4.62□□□□□ -1.67
SCN3A-210ENST00000640652 TMEM186Q96B77 213 aa4.62□□□□□ -1.67
SCN3A-210ENST00000640652 THYN1Q9P016 225 aa4.62□□□□□ -1.67
SCN3A-210ENST00000640652 CGAP01215 116 aa4.62□□□□□ -1.67
SCN3A-210ENST00000640652 COL8A1P27658 744 aa4.62□□□□□ -1.67
SCN3A-210ENST00000640652 ATP5G3P48201 142 aa4.62□□□□□ -1.67
SCN3A-210ENST00000640652 RIGQ13278 110 aa4.62□□□□□ -1.67
SCN3A-210ENST00000640652 C3orf36Q3SXR2 165 aa4.62□□□□□ -1.67
SCN3A-210ENST00000640652 C1orf194Q5T5A4 169 aa4.62□□□□□ -1.67
SCN3A-210ENST00000640652 ZFYVE26Q68DK2 2539 aa4.62□□□□□ -1.67
SCN3A-210ENST00000640652 A0A1B0GW15 77 aa4.61□□□□□ -1.67
SCN3A-210ENST00000640652 IZUMO1RA6ND01 250 aa4.61□□□□□ -1.67
SCN3A-210ENST00000640652 LGALS7P47929 136 aa4.61□□□□□ -1.67
SCN3A-210ENST00000640652 HIGD1AQ9Y241 93 aa4.61□□□□□ -1.67
SCN3A-210ENST00000640652 HYPMO75409 117 aa4.61□□□□□ -1.67
SCN3A-210ENST00000640652 ZNF324O75467 553 aaPredicted RBP4.61□□□□□ -1.67
SCN3A-210ENST00000640652 CRYBB3P26998 211 aa4.61□□□□□ -1.67
SCN3A-210ENST00000640652 C1orf185Q5T7R7 199 aa4.61□□□□□ -1.67
SCN3A-210ENST00000640652 ABHD12Q8N2K0 398 aa4.61□□□□□ -1.67
SCN3A-210ENST00000640652 TMEM191AQ9H0A3 160 aa4.61□□□□□ -1.67
SCN3A-210ENST00000640652 GSX1Q9H4S2 264 aaPredicted RBP4.61□□□□□ -1.67
SCN3A-210ENST00000640652 DPRXA6NFQ7 191 aa4.61□□□□□ -1.67
SCN3A-210ENST00000640652 MLNRO43193 412 aa4.61□□□□□ -1.67
SCN3A-210ENST00000640652 ARL16Q0P5N6 197 aa4.61□□□□□ -1.67
SCN3A-210ENST00000640652 NHLRC2Q8NBF2 726 aa4.61□□□□□ -1.67
SCN3A-210ENST00000640652 ITLN1Q8WWA0 313 aa4.61□□□□□ -1.67
SCN3A-210ENST00000640652 PPP1R14DQ9NXH3 145 aa4.61□□□□□ -1.67
SCN3A-210ENST00000640652 SLC35B1P78383 322 aa4.61□□□□□ -1.67
SCN3A-210ENST00000640652 ZNF726P1Q15940 193 aa4.61□□□□□ -1.67
SCN3A-210ENST00000640652 FA2HQ7L5A8 372 aa4.61□□□□□ -1.67
SCN3A-210ENST00000640652 SMIM12Q96EX1 92 aa4.61□□□□□ -1.67
SCN3A-210ENST00000640652 JMJD1CQ15652 2540 aa4.61□□□□□ -1.67
SCN3A-210ENST00000640652 C16orf97H3BN30 126 aa4.61□□□□□ -1.67
SCN3A-210ENST00000640652 CEACAM3P40198 252 aa4.61□□□□□ -1.67
SCN3A-210ENST00000640652 OR2T6Q8NHC8 308 aa4.61□□□□□ -1.67
SCN3A-210ENST00000640652 CCL17Q92583 94 aa4.61□□□□□ -1.67
SCN3A-210ENST00000640652 RPEQ96AT9 228 aa4.61□□□□□ -1.67
SCN3A-210ENST00000640652 YPEL4Q96NS1 127 aa4.61□□□□□ -1.67
SCN3A-210ENST00000640652 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.61□□□□□ -1.67
SCN3A-210ENST00000640652 GFRA3O60609 400 aa4.61□□□□□ -1.67
SCN3A-210ENST00000640652 IGFBP2P18065 325 aa4.61□□□□□ -1.67
SCN3A-210ENST00000640652 ADMP35318 185 aa4.61□□□□□ -1.67
SCN3A-210ENST00000640652 TMEM177Q53S58 311 aa4.61□□□□□ -1.67
SCN3A-210ENST00000640652 FAM71F2Q6NXP2 309 aa4.61□□□□□ -1.67
SCN3A-210ENST00000640652 DOLPP1Q86YN1 238 aa4.61□□□□□ -1.67
SCN3A-210ENST00000640652 GRAMD2BQ96HH9 432 aa4.61□□□□□ -1.67
SCN3A-210ENST00000640652 DERL1Q9BUN8 251 aa4.61□□□□□ -1.67
SCN3A-210ENST00000640652 IGKV1-39P01597 117 aa4.61□□□□□ -1.67
SCN3A-210ENST00000640652 IGKV1D-39P04432 117 aa4.61□□□□□ -1.67
SCN3A-210ENST00000640652 ASCL3Q9NQ33 180 aa4.61□□□□□ -1.67
SCN3A-210ENST00000640652 TACC2O95359 2948 aa4.61□□□□□ -1.67
SCN3A-210ENST00000640652 HIGD1CA8MV81 97 aa4.6□□□□□ -1.67
SCN3A-210ENST00000640652 PEX7O00628 323 aa4.6□□□□□ -1.67
SCN3A-210ENST00000640652 C1QTNF9P0C862 333 aa4.6□□□□□ -1.67
SCN3A-210ENST00000640652 NUTF2P61970 127 aaKnown RBP4.6□□□□□ -1.67
SCN3A-210ENST00000640652 RELBQ01201 579 aa4.6□□□□□ -1.67
SCN3A-210ENST00000640652 C5orf17Q8NAS9 161 aa4.6□□□□□ -1.67
SCN3A-210ENST00000640652 RND1Q92730 232 aa4.6□□□□□ -1.67
SCN3A-210ENST00000640652 COQ2Q96H96 371 aa4.6□□□□□ -1.67
SCN3A-210ENST00000640652 YTHDF2Q9Y5A9 579 aaKnown RBP4.6□□□□□ -1.67
SCN3A-210ENST00000640652 IGLV2-14P01704 120 aa4.6□□□□□ -1.67
SCN3A-210ENST00000640652 TBR1Q16650 682 aa4.6□□□□□ -1.67
SCN3A-210ENST00000640652 C2orf83Q53S99 150 aa4.6□□□□□ -1.67
SCN3A-210ENST00000640652 WDR86Q86TI4 376 aa4.6□□□□□ -1.67
SCN3A-210ENST00000640652 HS3ST6Q96QI5 342 aa4.6□□□□□ -1.67
SCN3A-210ENST00000640652 CCL13Q99616 98 aa4.6□□□□□ -1.67
SCN3A-210ENST00000640652 SH3BGRL2Q9UJC5 107 aa4.6□□□□□ -1.67
SCN3A-210ENST00000640652 CX3CL1P78423 397 aa4.6□□□□□ -1.67
SCN3A-210ENST00000640652 MEF2CQ06413 473 aaPredicted RBP4.6□□□□□ -1.67
SCN3A-210ENST00000640652 Q56UQ5 140 aa4.6□□□□□ -1.67
SCN3A-210ENST00000640652 PFN1P07737 140 aaKnown RBP4.6□□□□□ -1.67
SCN3A-210ENST00000640652 OR5AL1P0C617 328 aa4.6□□□□□ -1.67
SCN3A-210ENST00000640652 LYZP61626 148 aa4.6□□□□□ -1.67
SCN3A-210ENST00000640652 HES1Q14469 280 aa4.6□□□□□ -1.67
SCN3A-210ENST00000640652 VAMP3Q15836 100 aa4.6□□□□□ -1.67
SCN3A-210ENST00000640652 SCRT1Q9BWW7 348 aa4.6□□□□□ -1.67
SCN3A-210ENST00000640652 IFI27L2Q9H2X8 130 aa4.6□□□□□ -1.67
SCN3A-210ENST00000640652 SEPSECSQ9HD40 501 aaKnown RBP4.6□□□□□ -1.67
SCN3A-210ENST00000640652 TNFRSF19Q9NS68 423 aa4.6□□□□□ -1.67
SCN3A-210ENST00000640652 A6NDN8 102 aa4.6□□□□□ -1.67
SCN3A-210ENST00000640652 FOXF2Q12947 444 aa4.6□□□□□ -1.67
SCN3A-210ENST00000640652 TNXAQ16473 311 aa4.6□□□□□ -1.67
SCN3A-210ENST00000640652 GCSAMLQ5JQS6 135 aa4.6□□□□□ -1.67
SCN3A-210ENST00000640652 Q6AWC8 147 aa4.6□□□□□ -1.67
SCN3A-210ENST00000640652 VWA1Q6PCB0 445 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms