RNA–Protein interactions for RNA: ENST00000639953.1

ATM-229, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-229ENST00000639953 GCSAMLQ5JQS6 135 aa4.79□□□□□ -1.64
ATM-229ENST00000639953 KRTAP5-11Q6L8G4 156 aa4.79□□□□□ -1.64
ATM-229ENST00000639953 TMEM88Q6PEY1 159 aa4.79□□□□□ -1.64
ATM-229ENST00000639953 FIP1L1Q6UN15 594 aaKnown RBP4.79□□□□□ -1.64
ATM-229ENST00000639953 MOB3BQ86TA1 216 aa4.79□□□□□ -1.64
ATM-229ENST00000639953 ZNF561Q8N587 486 aa4.79□□□□□ -1.64
ATM-229ENST00000639953 ZBTB34Q8NCN2 500 aa4.79□□□□□ -1.64
ATM-229ENST00000639953 LY6G5BQ8NDX9 201 aa4.79□□□□□ -1.64
ATM-229ENST00000639953 ATP5SQ99766 215 aa4.79□□□□□ -1.64
ATM-229ENST00000639953 SPIN2AQ99865 258 aa4.79□□□□□ -1.64
ATM-229ENST00000639953 SPIN2BQ9BPZ2 258 aa4.79□□□□□ -1.64
ATM-229ENST00000639953 MRPL20Q9BYC9 149 aaKnown RBP4.79□□□□□ -1.64
ATM-229ENST00000639953 NCOR1P1Q9H4R4 102 aa4.79□□□□□ -1.64
ATM-229ENST00000639953 OR6C3Q9NZP0 311 aa4.79□□□□□ -1.64
ATM-229ENST00000639953 ONECUT1Q9UBC0 465 aa4.79□□□□□ -1.64
ATM-229ENST00000639953 GNG12Q9UBI6 72 aa4.79□□□□□ -1.64
ATM-229ENST00000639953 JPT1Q9UK76 154 aa4.79□□□□□ -1.64
ATM-229ENST00000639953 GAB2Q9UQC2 676 aa4.79□□□□□ -1.64
ATM-229ENST00000639953 CARHSP1Q9Y2V2 147 aaKnown RBP4.79□□□□□ -1.64
ATM-229ENST00000639953 SONP18583 2426 aaKnown RBP4.78□□□□□ -1.64
ATM-229ENST00000639953 MDFIC2A0A1B0GVS7 189 aa4.78□□□□□ -1.64
ATM-229ENST00000639953 A0A1W2PRD5 423 aa4.78□□□□□ -1.64
ATM-229ENST00000639953 A0A1W2PRF3 423 aa4.78□□□□□ -1.64
ATM-229ENST00000639953 A0A1W2PRM7 423 aa4.78□□□□□ -1.64
ATM-229ENST00000639953 HMGB3O15347 200 aaKnown RBP4.78□□□□□ -1.64
ATM-229ENST00000639953 YIF1AO95070 293 aa4.78□□□□□ -1.64
ATM-229ENST00000639953 OPN1MWP04001 364 aa4.78□□□□□ -1.64
ATM-229ENST00000639953 IGKV1-16P04430 117 aa4.78□□□□□ -1.64
ATM-229ENST00000639953 SFTA3P0C7M3 94 aa4.78□□□□□ -1.64
ATM-229ENST00000639953 PET100P0DJ07 73 aa4.78□□□□□ -1.64
ATM-229ENST00000639953 OPN1MW2P0DN77 364 aa4.78□□□□□ -1.64
ATM-229ENST00000639953 OPN1MW3P0DN78 364 aa4.78□□□□□ -1.64
ATM-229ENST00000639953 CNTFRP26992 372 aa4.78□□□□□ -1.64
ATM-229ENST00000639953 CAMLGP49069 296 aa4.78□□□□□ -1.64
ATM-229ENST00000639953 THBS3P49746 956 aa4.78□□□□□ -1.64
ATM-229ENST00000639953 FGF8P55075 233 aaPredicted RBP4.78□□□□□ -1.64
ATM-229ENST00000639953 SLC38A11Q08AI6 406 aa4.78□□□□□ -1.64
ATM-229ENST00000639953 KLRD1Q13241 179 aa4.78□□□□□ -1.64
ATM-229ENST00000639953 DHRS7BQ6IAN0 325 aaPredicted RBP4.78□□□□□ -1.64
ATM-229ENST00000639953 OR8G2PQ6IF36 304 aa4.78□□□□□ -1.64
ATM-229ENST00000639953 BRD3OSQ6XYD6 125 aa4.78□□□□□ -1.64
ATM-229ENST00000639953 IL34Q6ZMJ4 242 aa4.78□□□□□ -1.64
ATM-229ENST00000639953 C19orf35Q6ZS72 473 aa4.78□□□□□ -1.64
ATM-229ENST00000639953 SLC25A48Q6ZT89 311 aaKnown RBP4.78□□□□□ -1.64
ATM-229ENST00000639953 LYG1Q8N1E2 194 aa4.78□□□□□ -1.64
ATM-229ENST00000639953 NANPQ8TBE9 248 aa4.78□□□□□ -1.64
ATM-229ENST00000639953 SUN5Q8TC36 379 aa4.78□□□□□ -1.64
ATM-229ENST00000639953 LHX4Q969G2 390 aa4.78□□□□□ -1.64
ATM-229ENST00000639953 ST6GALNAC6Q969X2 333 aa4.78□□□□□ -1.64
ATM-229ENST00000639953 RAB40CQ96S21 281 aa4.78□□□□□ -1.64
ATM-229ENST00000639953 TBX15Q96SF7 602 aa4.78□□□□□ -1.64
ATM-229ENST00000639953 WDR61Q9GZS3 305 aaKnown RBP4.78□□□□□ -1.64
ATM-229ENST00000639953 SLC25A31Q9H0C2 315 aa4.78□□□□□ -1.64
ATM-229ENST00000639953 SIRPDQ9H106 197 aa4.78□□□□□ -1.64
ATM-229ENST00000639953 SIRT7Q9NRC8 400 aa4.78□□□□□ -1.64
ATM-229ENST00000639953 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.78□□□□□ -1.64
ATM-229ENST00000639953 LIN7CQ9NUP9 197 aaKnown RBP4.78□□□□□ -1.64
ATM-229ENST00000639953 NUP50Q9UKX7 468 aa4.78□□□□□ -1.64
ATM-229ENST00000639953 MTORP42345 2549 aa4.78□□□□□ -1.64
ATM-229ENST00000639953 WNK2Q9Y3S1 2297 aa4.77□□□□□ -1.65
ATM-229ENST00000639953 BORCS7-ASMTA0A0B4J1R7 106 aa4.77□□□□□ -1.65
ATM-229ENST00000639953 CENPVL3A0A0U1RRI6 287 aa4.77□□□□□ -1.65
ATM-229ENST00000639953 TEX50A0A1B0GTY4 177 aa4.77□□□□□ -1.65
ATM-229ENST00000639953 ZNF729A6NN14 1252 aaPredicted RBP4.77□□□□□ -1.65
ATM-229ENST00000639953 ZNF727A8MUV8 499 aa4.77□□□□□ -1.65
ATM-229ENST00000639953 F8W036 122 aa4.77□□□□□ -1.65
ATM-229ENST00000639953 UPK2O00526 184 aa4.77□□□□□ -1.65
ATM-229ENST00000639953 ITGB1BP1O14713 200 aa4.77□□□□□ -1.65
ATM-229ENST00000639953 IGLV2-23P01705 113 aa4.77□□□□□ -1.65
ATM-229ENST00000639953 ARG1P05089 322 aa4.77□□□□□ -1.65
ATM-229ENST00000639953 LIPFP07098 398 aa4.77□□□□□ -1.65
ATM-229ENST00000639953 OR13C7P0DN81 318 aa4.77□□□□□ -1.65
ATM-229ENST00000639953 NPPCP23582 126 aa4.77□□□□□ -1.65
ATM-229ENST00000639953 F2RL1P55085 397 aa4.77□□□□□ -1.65
ATM-229ENST00000639953 RPL23AP62750 156 aaKnown RBP4.77□□□□□ -1.65
ATM-229ENST00000639953 RPL31P62899 125 aaKnown RBP4.77□□□□□ -1.65
ATM-229ENST00000639953 ZNF616Q08AN1 781 aa4.77□□□□□ -1.65
ATM-229ENST00000639953 C10orf55Q5SWW7 151 aa4.77□□□□□ -1.65
ATM-229ENST00000639953 SPATA31B1PQ5VZV4 182 aa4.77□□□□□ -1.65
ATM-229ENST00000639953 OR4A47Q6IF82 309 aa4.77□□□□□ -1.65
ATM-229ENST00000639953 HCP5Q6MZN7 132 aa4.77□□□□□ -1.65
ATM-229ENST00000639953 UQCC3Q6UW78 93 aa4.77□□□□□ -1.65
ATM-229ENST00000639953 LCN15Q6UWW0 184 aa4.77□□□□□ -1.65
ATM-229ENST00000639953 ZNF833PQ6ZTB9 187 aa4.77□□□□□ -1.65
ATM-229ENST00000639953 H2BFWTQ7Z2G1 175 aa4.77□□□□□ -1.65
ATM-229ENST00000639953 VMO1Q7Z5L0 202 aa4.77□□□□□ -1.65
ATM-229ENST00000639953 CENPVQ7Z7K6 275 aaPredicted RBP4.77□□□□□ -1.65
ATM-229ENST00000639953 PNKDQ8N490 385 aa4.77□□□□□ -1.65
ATM-229ENST00000639953 RPP25LQ8N5L8 163 aaKnown RBP4.77□□□□□ -1.65
ATM-229ENST00000639953 OR10W1Q8NGF6 305 aa4.77□□□□□ -1.65
ATM-229ENST00000639953 RNASE11Q8TAA1 199 aaKnown RBP4.77□□□□□ -1.65
ATM-229ENST00000639953 C8orf46Q8TAG6 207 aa4.77□□□□□ -1.65
ATM-229ENST00000639953 RXFP4Q8TDU9 374 aa4.77□□□□□ -1.65
ATM-229ENST00000639953 DTD1Q8TEA8 209 aa4.77□□□□□ -1.65
ATM-229ENST00000639953 MBD3L1Q8WWY6 194 aa4.77□□□□□ -1.65
ATM-229ENST00000639953 TAF15Q92804 592 aaKnown RBP eCLIP4.77□□□□□ -1.65
ATM-229ENST00000639953 NARS2Q96I59 477 aaKnown RBP4.77□□□□□ -1.65
ATM-229ENST00000639953 YPEL4Q96NS1 127 aa4.77□□□□□ -1.65
ATM-229ENST00000639953 HSD17B10Q99714 261 aaKnown RBP4.77□□□□□ -1.65
ATM-229ENST00000639953 NABP2Q9BQ15 211 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms