RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 Q96MF0 132 aa3.6□□□□□ -1.83
SCN3A-209ENST00000639244 APOOQ9BUR5 198 aa3.6□□□□□ -1.83
SCN3A-209ENST00000639244 ZNF665Q9H7R5 613 aa3.6□□□□□ -1.83
SCN3A-209ENST00000639244 ZFHX2Q9C0A1 2572 aaPredicted RBP3.6□□□□□ -1.83
SCN3A-209ENST00000639244 TECTAO75443 2155 aa3.6□□□□□ -1.83
SCN3A-209ENST00000639244 NRAPQ86VF7 1730 aa3.6□□□□□ -1.83
SCN3A-209ENST00000639244 SRP19P09132 144 aaKnown RBP3.6□□□□□ -1.83
SCN3A-209ENST00000639244 LGALS1P09382 135 aaKnown RBP3.6□□□□□ -1.83
SCN3A-209ENST00000639244 SLC25A30Q5SVS4 291 aa3.6□□□□□ -1.83
SCN3A-209ENST00000639244 PROCRQ9UNN8 238 aa3.6□□□□□ -1.83
SCN3A-209ENST00000639244 TRAV13-1A0A0B4J241 112 aa3.6□□□□□ -1.83
SCN3A-209ENST00000639244 H3BS24 57 aa3.6□□□□□ -1.83
SCN3A-209ENST00000639244 PYYP10082 97 aa3.6□□□□□ -1.83
SCN3A-209ENST00000639244 GATA1P15976 413 aaPredicted RBP3.6□□□□□ -1.83
SCN3A-209ENST00000639244 KLF17Q5JT82 389 aaPredicted RBP3.6□□□□□ -1.83
SCN3A-209ENST00000639244 OR1I1O60431 355 aa3.59□□□□□ -1.83
SCN3A-209ENST00000639244 CSN1S1P47710 185 aa3.59□□□□□ -1.83
SCN3A-209ENST00000639244 HERV-K104P61576 105 aa3.59□□□□□ -1.83
SCN3A-209ENST00000639244 FAM19A1Q7Z5A9 133 aa3.59□□□□□ -1.83
SCN3A-209ENST00000639244 CLDN23Q96B33 292 aa3.59□□□□□ -1.83
SCN3A-209ENST00000639244 MPC1Q9Y5U8 109 aa3.59□□□□□ -1.83
SCN3A-209ENST00000639244 GRIFINA4D1Z8 144 aa3.59□□□□□ -1.83
SCN3A-209ENST00000639244 ZNF737O75373 536 aa3.59□□□□□ -1.83
SCN3A-209ENST00000639244 LYZL6O75951 148 aa3.59□□□□□ -1.83
SCN3A-209ENST00000639244 PRIMA1Q86XR5 153 aa3.59□□□□□ -1.83
SCN3A-209ENST00000639244 MAST2Q6P0Q8 1798 aa3.59□□□□□ -1.83
SCN3A-209ENST00000639244 A1L4Q6 167 aa3.59□□□□□ -1.83
SCN3A-209ENST00000639244 EDNRAP25101 427 aa3.59□□□□□ -1.83
SCN3A-209ENST00000639244 CA7P43166 264 aa3.59□□□□□ -1.83
SCN3A-209ENST00000639244 RND3P61587 244 aa3.59□□□□□ -1.83
SCN3A-209ENST00000639244 WDR5P61964 334 aaKnown RBP3.59□□□□□ -1.83
SCN3A-209ENST00000639244 PIGBOS1A0A0B4J2F0 54 aa3.59□□□□□ -1.83
SCN3A-209ENST00000639244 SMIM28A0A1B0GU29 152 aa3.59□□□□□ -1.83
SCN3A-209ENST00000639244 FAM181BA6NEQ2 426 aa3.59□□□□□ -1.83
SCN3A-209ENST00000639244 ZNF114Q8NC26 417 aa3.59□□□□□ -1.83
SCN3A-209ENST00000639244 LINC00526Q96FQ7 95 aa3.59□□□□□ -1.83
SCN3A-209ENST00000639244 C18orf15Q96N68 181 aa3.59□□□□□ -1.83
SCN3A-209ENST00000639244 NEUROG3Q9Y4Z2 214 aa3.59□□□□□ -1.83
SCN3A-209ENST00000639244 GLI3P10071 1580 aa3.59□□□□□ -1.83
SCN3A-209ENST00000639244 TRAV2A0A0B4J234 112 aa3.59□□□□□ -1.83
SCN3A-209ENST00000639244 FCGR2CP31995 323 aa3.59□□□□□ -1.83
SCN3A-209ENST00000639244 SLC25A11Q02978 314 aaKnown RBP3.59□□□□□ -1.83
SCN3A-209ENST00000639244 ARFRP1Q13795 201 aa3.59□□□□□ -1.83
SCN3A-209ENST00000639244 NNATQ16517 81 aa3.59□□□□□ -1.83
SCN3A-209ENST00000639244 C2orf68Q2NKX9 166 aa3.59□□□□□ -1.83
SCN3A-209ENST00000639244 C18orf32Q8TCD1 76 aa3.59□□□□□ -1.83
SCN3A-209ENST00000639244 MRPL24Q96A35 216 aaKnown RBP3.59□□□□□ -1.83
SCN3A-209ENST00000639244 CISD1Q9NZ45 108 aaKnown RBP3.59□□□□□ -1.83
SCN3A-209ENST00000639244 ROBO1Q9Y6N7 1651 aa3.59□□□□□ -1.84
SCN3A-209ENST00000639244 TRAV1-1A0A0B4J248 108 aa3.59□□□□□ -1.84
SCN3A-209ENST00000639244 ZFP92A6NM28 416 aa3.59□□□□□ -1.84
SCN3A-209ENST00000639244 LILRA1O75019 489 aa3.59□□□□□ -1.84
SCN3A-209ENST00000639244 CELA3BP08861 270 aa3.59□□□□□ -1.84
SCN3A-209ENST00000639244 MDKP21741 143 aaPredicted RBP3.59□□□□□ -1.84
SCN3A-209ENST00000639244 TRPT1Q86TN4 253 aaKnown RBP3.59□□□□□ -1.84
SCN3A-209ENST00000639244 OR2A5Q96R48 311 aa3.59□□□□□ -1.84
SCN3A-209ENST00000639244 PXMP4Q9Y6I8 212 aa3.59□□□□□ -1.84
SCN3A-209ENST00000639244 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.59□□□□□ -1.84
SCN3A-209ENST00000639244 CRLF1O75462 422 aa3.59□□□□□ -1.84
SCN3A-209ENST00000639244 NHLRC4P0CG21 123 aaPredicted RBP3.59□□□□□ -1.84
SCN3A-209ENST00000639244 HLA-DOBP13765 273 aa3.59□□□□□ -1.84
SCN3A-209ENST00000639244 IL3RAP26951 378 aa3.59□□□□□ -1.84
SCN3A-209ENST00000639244 ABCA11PQ4W5N1 156 aa3.59□□□□□ -1.84
SCN3A-209ENST00000639244 ADAMTSL4Q6UY14 1074 aa3.59□□□□□ -1.84
SCN3A-209ENST00000639244 Q6ZVL8 140 aa3.59□□□□□ -1.84
SCN3A-209ENST00000639244 RPS19BP1Q86WX3 136 aaKnown RBP3.59□□□□□ -1.84
SCN3A-209ENST00000639244 TMEM204Q9BSN7 226 aa3.59□□□□□ -1.84
SCN3A-209ENST00000639244 VSIG4Q9Y279 399 aa3.59□□□□□ -1.84
SCN3A-209ENST00000639244 KNCNA6PVL3 124 aa3.58□□□□□ -1.84
SCN3A-209ENST00000639244 OR5AL1P0C617 328 aa3.58□□□□□ -1.84
SCN3A-209ENST00000639244 FXYD6P3P58550 94 aa3.58□□□□□ -1.84
SCN3A-209ENST00000639244 FAM166AQ6J272 317 aa3.58□□□□□ -1.84
SCN3A-209ENST00000639244 MRGPREQ86SM8 312 aa3.58□□□□□ -1.84
SCN3A-209ENST00000639244 COL3A1P02461 1466 aaPredicted RBP3.58□□□□□ -1.84
SCN3A-209ENST00000639244 BRWD3Q6RI45 1802 aa3.58□□□□□ -1.84
SCN3A-209ENST00000639244 SDCBPO00560 298 aaPredicted RBP3.58□□□□□ -1.84
SCN3A-209ENST00000639244 OVOL1O14753 267 aa3.58□□□□□ -1.84
SCN3A-209ENST00000639244 SFTPDP35247 375 aa3.58□□□□□ -1.84
SCN3A-209ENST00000639244 PLGLB1Q02325 96 aa3.58□□□□□ -1.84
SCN3A-209ENST00000639244 SYT14P1Q58G82 188 aa3.58□□□□□ -1.84
SCN3A-209ENST00000639244 TCF23Q7RTU1 214 aa3.58□□□□□ -1.84
SCN3A-209ENST00000639244 TDHQ8IZJ6 230 aa3.58□□□□□ -1.84
SCN3A-209ENST00000639244 SSMEM1Q8WWF3 244 aa3.58□□□□□ -1.84
SCN3A-209ENST00000639244 RND1Q92730 232 aa3.58□□□□□ -1.84
SCN3A-209ENST00000639244 C20orf78Q9BR46 151 aa3.58□□□□□ -1.84
SCN3A-209ENST00000639244 C5orf66Q9H5L9 145 aa3.58□□□□□ -1.84
SCN3A-209ENST00000639244 SAP30LQ9HAJ7 183 aa3.58□□□□□ -1.84
SCN3A-209ENST00000639244 CMC2Q9NRP2 79 aa3.58□□□□□ -1.84
SCN3A-209ENST00000639244 ZAR1LA6NP61 321 aa3.58□□□□□ -1.84
SCN3A-209ENST00000639244 MYOD1P15172 320 aa3.58□□□□□ -1.84
SCN3A-209ENST00000639244 DIAPH2-AS1Q14236 149 aa3.58□□□□□ -1.84
SCN3A-209ENST00000639244 THAP8Q8NA92 274 aa3.58□□□□□ -1.84
SCN3A-209ENST00000639244 OR10G8Q8NGN5 311 aa3.58□□□□□ -1.84
SCN3A-209ENST00000639244 FTSJ1Q9UET6 329 aa3.58□□□□□ -1.84
SCN3A-209ENST00000639244 C19orf25Q9UFG5 118 aaPredicted RBP3.58□□□□□ -1.84
SCN3A-209ENST00000639244 FBXL7Q9UJT9 491 aa3.58□□□□□ -1.84
SCN3A-209ENST00000639244 DNAJC15Q9Y5T4 150 aa3.58□□□□□ -1.84
SCN3A-209ENST00000639244 PTPRZ1P23471 2315 aaPredicted RBP3.58□□□□□ -1.84
SCN3A-209ENST00000639244 TRAV8-2A0A0B4J237 113 aa3.58□□□□□ -1.84
SCN3A-209ENST00000639244 CEBPZOSA8MTT3 80 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms