RNA–Protein interactions for RNA: ENST00000637786.1

CHRNA7-231, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 1 (best)

Gene CHRNA7, Length 383 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-231ENST00000637786 POLR2GP62487 172 aaKnown RBP eCLIP17.33■□□□□ 0.36
CHRNA7-231ENST00000637786 C18orf65Q6ZTR6 163 aa17.33■□□□□ 0.36
CHRNA7-231ENST00000637786 RAB40CQ96S21 281 aa17.33■□□□□ 0.36
CHRNA7-231ENST00000637786 MED28Q9H204 178 aa17.33■□□□□ 0.36
CHRNA7-231ENST00000637786 SIX6O95475 246 aa17.32■□□□□ 0.36
CHRNA7-231ENST00000637786 SCGB1D2O95969 90 aa17.32■□□□□ 0.36
CHRNA7-231ENST00000637786 IFNA10P01566 189 aa17.32■□□□□ 0.36
CHRNA7-231ENST00000637786 H2BFSP57053 126 aa17.32■□□□□ 0.36
CHRNA7-231ENST00000637786 RPP30P78346 268 aaKnown RBP17.32■□□□□ 0.36
CHRNA7-231ENST00000637786 DEFA5Q01523 94 aa17.32■□□□□ 0.36
CHRNA7-231ENST00000637786 EXOSC2Q13868 293 aaKnown RBP17.32■□□□□ 0.36
CHRNA7-231ENST00000637786 C8orf86Q6ZUL3 223 aa17.32■□□□□ 0.36
CHRNA7-231ENST00000637786 EEF1AKMT3Q96AZ1 226 aa17.32■□□□□ 0.36
CHRNA7-231ENST00000637786 RCL1Q9Y2P8 373 aaKnown RBP17.32■□□□□ 0.36
CHRNA7-231ENST00000637786 TRBV7-1A0A0A6YYK4 115 aa17.31■□□□□ 0.36
CHRNA7-231ENST00000637786 K7EIM0 57 aa17.31■□□□□ 0.36
CHRNA7-231ENST00000637786 SSSCA1O60232 199 aa17.31■□□□□ 0.36
CHRNA7-231ENST00000637786 IGHV3-11P01762 117 aa17.31■□□□□ 0.36
CHRNA7-231ENST00000637786 IAPPP10997 89 aa17.31■□□□□ 0.36
CHRNA7-231ENST00000637786 TAS2R30P59541 319 aa17.31■□□□□ 0.36
CHRNA7-231ENST00000637786 C11orf87Q6NUJ2 197 aa17.31■□□□□ 0.36
CHRNA7-231ENST00000637786 RNASEH2CQ8TDP1 164 aaKnown RBP17.31■□□□□ 0.36
CHRNA7-231ENST00000637786 MISP3Q96FF7 219 aa17.31■□□□□ 0.36
CHRNA7-231ENST00000637786 SMIM8Q96KF7 97 aa17.31■□□□□ 0.36
CHRNA7-231ENST00000637786 ATP6V0BQ99437 205 aa17.31■□□□□ 0.36
CHRNA7-231ENST00000637786 WNK1Q9H4A3 2382 aa17.3■□□□□ 0.36
CHRNA7-231ENST00000637786 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP17.3■□□□□ 0.36
CHRNA7-231ENST00000637786 I3L2K1 104 aa17.3■□□□□ 0.36
CHRNA7-231ENST00000637786 RRAS2P62070 204 aaPredicted RBP17.3■□□□□ 0.36
CHRNA7-231ENST00000637786 TMEM170AQ8WVE7 144 aa17.3■□□□□ 0.36
CHRNA7-231ENST00000637786 OR5B12Q96R08 314 aa17.3■□□□□ 0.36
CHRNA7-231ENST00000637786 MFSD2BA6NFX1 497 aa17.29■□□□□ 0.36
CHRNA7-231ENST00000637786 K7EPK0 472 aa17.29■□□□□ 0.36
CHRNA7-231ENST00000637786 MYCNOSP40205 109 aa17.29■□□□□ 0.36
CHRNA7-231ENST00000637786 SCARB1Q8WTV0 552 aa17.29■□□□□ 0.36
CHRNA7-231ENST00000637786 PEF1Q9UBV8 284 aaKnown RBP17.29■□□□□ 0.36
CHRNA7-231ENST00000637786 C15orf62A8K5M9 175 aa17.28■□□□□ 0.36
CHRNA7-231ENST00000637786 CCL24O00175 119 aa17.28■□□□□ 0.36
CHRNA7-231ENST00000637786 MT-CO2P00403 227 aa17.28■□□□□ 0.36
CHRNA7-231ENST00000637786 HSPB1P04792 205 aaKnown RBP17.28■□□□□ 0.36
CHRNA7-231ENST00000637786 RAB11AP62491 216 aa17.28■□□□□ 0.36
CHRNA7-231ENST00000637786 RAB32Q13637 225 aa17.28■□□□□ 0.36
CHRNA7-231ENST00000637786 FHL3Q13643 280 aa17.28■□□□□ 0.36
CHRNA7-231ENST00000637786 FCN2Q15485 313 aa17.28■□□□□ 0.36
CHRNA7-231ENST00000637786 ZNF502Q8TBZ5 544 aa17.28■□□□□ 0.36
CHRNA7-231ENST00000637786 RAX2Q96IS3 184 aa17.28■□□□□ 0.36
CHRNA7-231ENST00000637786 CCDC140Q96MF4 163 aa17.28■□□□□ 0.36
CHRNA7-231ENST00000637786 RANGRFQ9HD47 186 aaPredicted RBP17.28■□□□□ 0.36
CHRNA7-231ENST00000637786 C21orf62Q9NYP8 219 aa17.28■□□□□ 0.36
CHRNA7-231ENST00000637786 PSENENQ9NZ42 101 aa17.28■□□□□ 0.36
CHRNA7-231ENST00000637786 STRAPQ9Y3F4 350 aaKnown RBP17.28■□□□□ 0.36
CHRNA7-231ENST00000637786 RPS10-NUDT3A0A1W2PQS6 291 aa17.27■□□□□ 0.36
CHRNA7-231ENST00000637786 TSC22D2O75157 780 aa17.27■□□□□ 0.36
CHRNA7-231ENST00000637786 TMEM50AO95807 157 aa17.27■□□□□ 0.36
CHRNA7-231ENST00000637786 CXCL3P19876 107 aa17.27■□□□□ 0.36
CHRNA7-231ENST00000637786 PVALBP20472 110 aaPredicted RBP17.27■□□□□ 0.36
CHRNA7-231ENST00000637786 FCGR2BP31994 310 aaPredicted RBP17.27■□□□□ 0.36
CHRNA7-231ENST00000637786 PAX9P55771 341 aa17.27■□□□□ 0.36
CHRNA7-231ENST00000637786 ZNF616Q08AN1 781 aa17.27■□□□□ 0.36
CHRNA7-231ENST00000637786 DEFB136Q30KP8 78 aa17.27■□□□□ 0.36
CHRNA7-231ENST00000637786 ETV3LQ6ZN32 361 aa17.27■□□□□ 0.36
CHRNA7-231ENST00000637786 OR11H1Q8NG94 326 aa17.27■□□□□ 0.36
CHRNA7-231ENST00000637786 OR11H7Q8NGC8 314 aa17.27■□□□□ 0.36
CHRNA7-231ENST00000637786 OR1N2Q8NGR9 330 aa17.27■□□□□ 0.36
CHRNA7-231ENST00000637786 ASB13Q8WXK3 278 aa17.27■□□□□ 0.36
CHRNA7-231ENST00000637786 PINX1Q96BK5 328 aaKnown RBP17.27■□□□□ 0.36
CHRNA7-231ENST00000637786 GAR1Q9NY12 217 aaKnown RBP17.27■□□□□ 0.36
CHRNA7-231ENST00000637786 LSM5Q9Y4Y9 91 aaKnown RBP17.27■□□□□ 0.36
CHRNA7-231ENST00000637786 TSPAN15O95858 294 aa17.26■□□□□ 0.35
CHRNA7-231ENST00000637786 S100A10P60903 97 aa17.26■□□□□ 0.35
CHRNA7-231ENST00000637786 SPANXN5Q5MJ07 72 aa17.26■□□□□ 0.35
CHRNA7-231ENST00000637786 ETFRF1Q6IPR1 90 aa17.26■□□□□ 0.35
CHRNA7-231ENST00000637786 OR4C12Q96R67 309 aa17.26■□□□□ 0.35
CHRNA7-231ENST00000637786 TXN2Q99757 166 aa17.26■□□□□ 0.35
CHRNA7-231ENST00000637786 C11orf1Q9H5F2 150 aa17.26■□□□□ 0.35
CHRNA7-231ENST00000637786 VWFP04275 2813 aa17.26■□□□□ 0.35
CHRNA7-231ENST00000637786 ANKRD34BA5PLL1 514 aa17.25■□□□□ 0.35
CHRNA7-231ENST00000637786 LINC01619G3V211 115 aa17.25■□□□□ 0.35
CHRNA7-231ENST00000637786 L7N2F9 121 aa17.25■□□□□ 0.35
CHRNA7-231ENST00000637786 IFNA4P05014 189 aa17.25■□□□□ 0.35
CHRNA7-231ENST00000637786 OR8U8P0C7N1 319 aa17.25■□□□□ 0.35
CHRNA7-231ENST00000637786 OPRK1P41145 380 aa17.25■□□□□ 0.35
CHRNA7-231ENST00000637786 MFAP4P55083 255 aa17.25■□□□□ 0.35
CHRNA7-231ENST00000637786 VAMP2P63027 116 aa17.25■□□□□ 0.35
CHRNA7-231ENST00000637786 Q6ZNX1 250 aa17.25■□□□□ 0.35
CHRNA7-231ENST00000637786 PPP1R1CQ8WVI7 109 aa17.25■□□□□ 0.35
CHRNA7-231ENST00000637786 DPF1Q92782 380 aa17.25■□□□□ 0.35
CHRNA7-231ENST00000637786 FNDC4Q9H6D8 234 aaPredicted RBP17.25■□□□□ 0.35
CHRNA7-231ENST00000637786 S4R3C0 116 aa17.25■□□□□ 0.35
CHRNA7-231ENST00000637786 IGHV4OR15-8A0A075B7B6 117 aa17.24■□□□□ 0.35
CHRNA7-231ENST00000637786 A0A087WW49 117 aa17.24■□□□□ 0.35
CHRNA7-231ENST00000637786 DEDDO75618 318 aa17.24■□□□□ 0.35
CHRNA7-231ENST00000637786 PF4P02776 101 aa17.24■□□□□ 0.35
CHRNA7-231ENST00000637786 RLN2P04090 185 aa17.24■□□□□ 0.35
CHRNA7-231ENST00000637786 SLC25A4P12235 298 aa17.24■□□□□ 0.35
CHRNA7-231ENST00000637786 ZP3P21754 424 aa17.24■□□□□ 0.35
CHRNA7-231ENST00000637786 TMEM14EPQ6UXP3 125 aa17.24■□□□□ 0.35
CHRNA7-231ENST00000637786 CLEC19AQ6UXS0 136 aa17.24■□□□□ 0.35
CHRNA7-231ENST00000637786 CACNG8Q8WXS5 425 aa17.24■□□□□ 0.35
CHRNA7-231ENST00000637786 IGHV3-21A0A0B4J1V1 117 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms