RNA–Protein interactions for RNA: ENST00000637519.1

CHRNA7-228, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 2,084 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-228ENST00000637519 FAM103A1Q9BTL3 118 aaKnown RBP17.27■□□□□ 0.36
CHRNA7-228ENST00000637519 MRPL36Q9P0J6 103 aaKnown RBP17.27■□□□□ 0.36
CHRNA7-228ENST00000637519 MINOS1-NBL1R4GNA1 71 aa17.27■□□□□ 0.36
CHRNA7-228ENST00000637519 CTXND1A0A1B0GTU2 59 aa17.27■□□□□ 0.35
CHRNA7-228ENST00000637519 NPBWR1P48145 328 aa17.27■□□□□ 0.35
CHRNA7-228ENST00000637519 B2MP61769 119 aa17.27■□□□□ 0.35
CHRNA7-228ENST00000637519 FAM120AOSQ5T036 256 aa17.27■□□□□ 0.35
CHRNA7-228ENST00000637519 IQCF2Q8IXL9 164 aa17.27■□□□□ 0.35
CHRNA7-228ENST00000637519 SVBPQ8N300 66 aa17.27■□□□□ 0.35
CHRNA7-228ENST00000637519 RNF5Q99942 180 aa17.27■□□□□ 0.35
CHRNA7-228ENST00000637519 NKX6-2Q9C056 277 aaPredicted RBP17.27■□□□□ 0.35
CHRNA7-228ENST00000637519 IGHV3-21A0A0B4J1V1 117 aa17.26■□□□□ 0.35
CHRNA7-228ENST00000637519 CDC34P49427 236 aaPredicted RBP17.26■□□□□ 0.35
CHRNA7-228ENST00000637519 CCDC144NLQ6NUI1 221 aa17.26■□□□□ 0.35
CHRNA7-228ENST00000637519 ACTR3CQ9C0K3 210 aaPredicted RBP17.26■□□□□ 0.35
CHRNA7-228ENST00000637519 LOC102723971A0A1B0GUV8 181 aa17.25■□□□□ 0.35
CHRNA7-228ENST00000637519 ZNF506Q5JVG8 444 aa17.25■□□□□ 0.35
CHRNA7-228ENST00000637519 TMEM144Q7Z5S9 345 aa17.25■□□□□ 0.35
CHRNA7-228ENST00000637519 GATAD1Q8WUU5 269 aa17.25■□□□□ 0.35
CHRNA7-228ENST00000637519 MISP3Q96FF7 219 aa17.25■□□□□ 0.35
CHRNA7-228ENST00000637519 SLC35B3Q9H1N7 401 aa17.25■□□□□ 0.35
CHRNA7-228ENST00000637519 KMT2BQ9UMN6 2715 aaPredicted RBP17.25■□□□□ 0.35
CHRNA7-228ENST00000637519 CENPVL3A0A0U1RRI6 287 aa17.25■□□□□ 0.35
CHRNA7-228ENST00000637519 OR10J1P30954 320 aa17.25■□□□□ 0.35
CHRNA7-228ENST00000637519 POLR3KQ9Y2Y1 108 aaPredicted RBP17.25■□□□□ 0.35
CHRNA7-228ENST00000637519 FAM74A7A6NL05 159 aa17.24■□□□□ 0.35
CHRNA7-228ENST00000637519 NDUFA3O95167 84 aa17.24■□□□□ 0.35
CHRNA7-228ENST00000637519 CNIH1O95406 144 aa17.24■□□□□ 0.35
CHRNA7-228ENST00000637519 BCL2P10415 239 aa17.24■□□□□ 0.35
CHRNA7-228ENST00000637519 MAS1LP35410 378 aa17.24■□□□□ 0.35
CHRNA7-228ENST00000637519 ATP5IP56385 69 aaPredicted RBP17.24■□□□□ 0.35
CHRNA7-228ENST00000637519 FAM74A3Q4VXF1 159 aa17.24■□□□□ 0.35
CHRNA7-228ENST00000637519 OR2T10Q8NGZ9 312 aa17.24■□□□□ 0.35
CHRNA7-228ENST00000637519 DMRT1Q9Y5R6 373 aa17.24■□□□□ 0.35
CHRNA7-228ENST00000637519 USP9YO00507 2555 aaPredicted RBP17.24■□□□□ 0.35
CHRNA7-228ENST00000637519 NCBP2LA6PVI3 153 aaKnown RBP17.24■□□□□ 0.35
CHRNA7-228ENST00000637519 CYB5BO43169 146 aa17.24■□□□□ 0.35
CHRNA7-228ENST00000637519 SRP19P09132 144 aaKnown RBP17.24■□□□□ 0.35
CHRNA7-228ENST00000637519 PAX8Q06710 450 aa17.24■□□□□ 0.35
CHRNA7-228ENST00000637519 AKIRIN2Q53H80 203 aa17.24■□□□□ 0.35
CHRNA7-228ENST00000637519 SPATA31B1PQ5VZV4 182 aa17.24■□□□□ 0.35
CHRNA7-228ENST00000637519 CYB561D1Q8N8Q1 229 aa17.24■□□□□ 0.35
CHRNA7-228ENST00000637519 NPBQ8NG41 125 aa17.24■□□□□ 0.35
CHRNA7-228ENST00000637519 TBL2Q9Y4P3 447 aaKnown RBP17.24■□□□□ 0.35
CHRNA7-228ENST00000637519 FNDC10F2Z333 226 aa17.23■□□□□ 0.35
CHRNA7-228ENST00000637519 NPFFO15130 113 aa17.23■□□□□ 0.35
CHRNA7-228ENST00000637519 SUB1P53999 127 aaKnown RBP eCLIP17.23■□□□□ 0.35
CHRNA7-228ENST00000637519 SLC35E1Q96K37 410 aa17.23■□□□□ 0.35
CHRNA7-228ENST00000637519 OOSP1A8MZH6 123 aa17.22■□□□□ 0.35
CHRNA7-228ENST00000637519 LINC00869P0C866 280 aa17.22■□□□□ 0.35
CHRNA7-228ENST00000637519 TMEM11P17152 192 aa17.22■□□□□ 0.35
CHRNA7-228ENST00000637519 PRR20EP86478 221 aa17.22■□□□□ 0.35
CHRNA7-228ENST00000637519 PRR20CP86479 221 aa17.22■□□□□ 0.35
CHRNA7-228ENST00000637519 PRR20DP86480 221 aa17.22■□□□□ 0.35
CHRNA7-228ENST00000637519 PRR20BP86481 221 aa17.22■□□□□ 0.35
CHRNA7-228ENST00000637519 PRR20AP86496 221 aa17.22■□□□□ 0.35
CHRNA7-228ENST00000637519 CLEC12BQ2HXU8 276 aa17.22■□□□□ 0.35
CHRNA7-228ENST00000637519 C5orf64Q2M2E5 130 aa17.22■□□□□ 0.35
CHRNA7-228ENST00000637519 Q8N6K4 173 aa17.22■□□□□ 0.35
CHRNA7-228ENST00000637519 RNASEH2CQ8TDP1 164 aaKnown RBP17.22■□□□□ 0.35
CHRNA7-228ENST00000637519 ABHD5Q8WTS1 349 aa17.22■□□□□ 0.35
CHRNA7-228ENST00000637519 NPIPB3Q92617 1050 aa17.22■□□□□ 0.35
CHRNA7-228ENST00000637519 SEPSECSQ9HD40 501 aaKnown RBP17.22■□□□□ 0.35
CHRNA7-228ENST00000637519 SLC45A2Q9UMX9 530 aa17.22■□□□□ 0.35
CHRNA7-228ENST00000637519 PTPN13Q12923 2485 aa17.22■□□□□ 0.35
CHRNA7-228ENST00000637519 TENM4Q6N022 2769 aa17.22■□□□□ 0.35
CHRNA7-228ENST00000637519 TRAV40A0A0B4J280 105 aa17.22■□□□□ 0.35
CHRNA7-228ENST00000637519 SEC14L6B5MCN3 397 aa17.22■□□□□ 0.35
CHRNA7-228ENST00000637519 TMEM88Q6PEY1 159 aa17.22■□□□□ 0.35
CHRNA7-228ENST00000637519 BRD3OSQ6XYD6 125 aa17.22■□□□□ 0.35
CHRNA7-228ENST00000637519 C20orf24Q9BUV8 137 aa17.22■□□□□ 0.35
CHRNA7-228ENST00000637519 RPL29P47914 159 aaKnown RBP17.21■□□□□ 0.35
CHRNA7-228ENST00000637519 NDPQ00604 133 aa17.21■□□□□ 0.35
CHRNA7-228ENST00000637519 RAB31Q13636 194 aa17.21■□□□□ 0.35
CHRNA7-228ENST00000637519 MALSU1Q96EH3 234 aa17.21■□□□□ 0.35
CHRNA7-228ENST00000637519 A0A1W2PPV4 95 aa17.2■□□□□ 0.34
CHRNA7-228ENST00000637519 AKR1C3P42330 323 aa17.2■□□□□ 0.34
CHRNA7-228ENST00000637519 FXYD3Q14802 87 aa17.2■□□□□ 0.34
CHRNA7-228ENST00000637519 KHDC3LQ587J8 217 aa17.2■□□□□ 0.34
CHRNA7-228ENST00000637519 CACNG8Q8WXS5 425 aa17.2■□□□□ 0.34
CHRNA7-228ENST00000637519 SLC25A33Q9BSK2 321 aa17.2■□□□□ 0.34
CHRNA7-228ENST00000637519 ANKRD17O75179 2603 aaKnown RBP17.2■□□□□ 0.34
CHRNA7-228ENST00000637519 GPX4P36969 197 aaPredicted RBP17.2■□□□□ 0.34
CHRNA7-228ENST00000637519 RND2P52198 227 aa17.2■□□□□ 0.34
CHRNA7-228ENST00000637519 ZNF114Q8NC26 417 aa17.2■□□□□ 0.34
CHRNA7-228ENST00000637519 MAPK1IP1LQ8NDC0 245 aa17.2■□□□□ 0.34
CHRNA7-228ENST00000637519 F11RQ9Y624 299 aaKnown RBP17.2■□□□□ 0.34
CHRNA7-228ENST00000637519 SOX21Q9Y651 276 aaPredicted RBP17.2■□□□□ 0.34
CHRNA7-228ENST00000637519 DNASE2O00115 360 aaPredicted RBP17.19■□□□□ 0.34
CHRNA7-228ENST00000637519 SNAPINO95295 136 aa17.19■□□□□ 0.34
CHRNA7-228ENST00000637519 HSPB1P04792 205 aaKnown RBP17.19■□□□□ 0.34
CHRNA7-228ENST00000637519 ZNF90Q03938 601 aa17.19■□□□□ 0.34
CHRNA7-228ENST00000637519 SOHLH1Q5JUK2 328 aa17.19■□□□□ 0.34
CHRNA7-228ENST00000637519 CBLN2Q8IUK8 224 aa17.19■□□□□ 0.34
CHRNA7-228ENST00000637519 CLRN3Q8NCR9 226 aa17.19■□□□□ 0.34
CHRNA7-228ENST00000637519 KCNIP2Q9NS61 270 aa17.19■□□□□ 0.34
CHRNA7-228ENST00000637519 ABCA12Q86UK0 2595 aa17.19■□□□□ 0.34
CHRNA7-228ENST00000637519 IGHV4-38-2P0DP08 117 aa17.19■□□□□ 0.34
CHRNA7-228ENST00000637519 HIST2H2BCQ6DN03 193 aa17.19■□□□□ 0.34
CHRNA7-228ENST00000637519 MRPL41Q8IXM3 137 aaKnown RBP17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms