RNA–Protein interactions for RNA: ENST00000637033.1

CHRNA7-223, Transcript of cholinergic receptor nicotinic alpha 7 subunit, human

TSL 5 BASIC

Gene CHRNA7, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHRNA7-223	ENST00000637033	RAN	P62826	216 aa	Known RBP	10.67	□□□□□ -0.7
CHRNA7-223	ENST00000637033	STPG4	Q8N801	248 aa		10.67	□□□□□ -0.7
CHRNA7-223	ENST00000637033	ABCA4	P78363	2273 aa		10.67	□□□□□ -0.7
CHRNA7-223	ENST00000637033	AKAP13	Q12802	2813 aa		10.66	□□□□□ -0.7
CHRNA7-223	ENST00000637033	C15orf61	A6NNL5	157 aa		10.66	□□□□□ -0.7
CHRNA7-223	ENST00000637033	LINC00869	P0C866	280 aa		10.66	□□□□□ -0.7
CHRNA7-223	ENST00000637033	FOXA3	P55318	350 aa	Predicted RBP	10.66	□□□□□ -0.7
CHRNA7-223	ENST00000637033	RPL8	P62917	257 aa	Known RBP	10.66	□□□□□ -0.7
CHRNA7-223	ENST00000637033	OR4S2	Q8NH73	311 aa		10.66	□□□□□ -0.7
CHRNA7-223	ENST00000637033	USF1	P22415	310 aa	Predicted RBP	10.66	□□□□□ -0.7
CHRNA7-223	ENST00000637033	MFAP2	P55001	183 aa		10.66	□□□□□ -0.7
CHRNA7-223	ENST00000637033	BMPR1B	O00238	502 aa		10.65	□□□□□ -0.7
CHRNA7-223	ENST00000637033	MPDU1	O75352	247 aa		10.65	□□□□□ -0.7
CHRNA7-223	ENST00000637033	IGKV3-15	P01624	115 aa		10.65	□□□□□ -0.7
CHRNA7-223	ENST00000637033	C3orf79	P0CE67	100 aa		10.65	□□□□□ -0.7
CHRNA7-223	ENST00000637033	RAB7A	P51149	207 aa		10.65	□□□□□ -0.7
CHRNA7-223	ENST00000637033	PAFAH1B2	P68402	229 aa		10.65	□□□□□ -0.7
CHRNA7-223	ENST00000637033	CCL8	P80075	99 aa		10.65	□□□□□ -0.7
CHRNA7-223	ENST00000637033	DIAPH2-AS1	Q14236	149 aa		10.65	□□□□□ -0.7
CHRNA7-223	ENST00000637033	TEX43	Q6ZNM6	134 aa		10.65	□□□□□ -0.7
CHRNA7-223	ENST00000637033	IGHV3-72	A0A0B4J1Y9	119 aa		10.65	□□□□□ -0.7
CHRNA7-223	ENST00000637033	MT-CO2	P00403	227 aa		10.65	□□□□□ -0.7
CHRNA7-223	ENST00000637033	OR5G3	P0C626	314 aa		10.65	□□□□□ -0.7
CHRNA7-223	ENST00000637033	UBE2L3	P68036	154 aa	Known RBP	10.65	□□□□□ -0.7
CHRNA7-223	ENST00000637033	RNASEK	Q6P5S7	137 aa	Known RBP	10.65	□□□□□ -0.7
CHRNA7-223	ENST00000637033	FAM90A1	Q86YD7	464 aa		10.65	□□□□□ -0.7
CHRNA7-223	ENST00000637033	TMEM178A	Q8NBL3	297 aa		10.65	□□□□□ -0.7
CHRNA7-223	ENST00000637033	IL19	Q9UHD0	177 aa		10.65	□□□□□ -0.7
CHRNA7-223	ENST00000637033	CDC42EP3	Q9UKI2	254 aa		10.65	□□□□□ -0.7
CHRNA7-223	ENST00000637033	MGST3	O14880	152 aa		10.65	□□□□□ -0.71
CHRNA7-223	ENST00000637033	TCTA	P57738	103 aa		10.65	□□□□□ -0.71
CHRNA7-223	ENST00000637033	C17orf58	Q2M2W7	97 aa		10.65	□□□□□ -0.71
CHRNA7-223	ENST00000637033	LEMD1	Q68G75	181 aa		10.65	□□□□□ -0.71
CHRNA7-223	ENST00000637033	TMEM136	Q6ZRR5	245 aa		10.65	□□□□□ -0.71
CHRNA7-223	ENST00000637033	C22orf34	Q6ZV56	151 aa		10.65	□□□□□ -0.71
CHRNA7-223	ENST00000637033	ZPBP	Q9BS86	351 aa		10.65	□□□□□ -0.71
CHRNA7-223	ENST00000637033	DNAJC4	Q9NNZ3	241 aa		10.65	□□□□□ -0.71
CHRNA7-223	ENST00000637033	WNK2	Q9Y3S1	2297 aa		10.65	□□□□□ -0.71
CHRNA7-223	ENST00000637033	ZNF137P	P52743	207 aa		10.64	□□□□□ -0.71
CHRNA7-223	ENST00000637033	PEAR1	Q5VY43	1037 aa	Predicted RBP	10.64	□□□□□ -0.71
CHRNA7-223	ENST00000637033	UNQ5815/PRO19632	Q6UWF5	114 aa		10.64	□□□□□ -0.71
CHRNA7-223	ENST00000637033	UBALD2	Q8IYN6	164 aa		10.64	□□□□□ -0.71
CHRNA7-223	ENST00000637033	KIR3DL3	Q8N743	410 aa		10.64	□□□□□ -0.71
CHRNA7-223	ENST00000637033	OR2D3	Q8NGH3	330 aa		10.64	□□□□□ -0.71
CHRNA7-223	ENST00000637033	OR52E5	Q8NH55	327 aa		10.64	□□□□□ -0.71
CHRNA7-223	ENST00000637033	CLEC5A	Q9NY25	188 aa		10.64	□□□□□ -0.71
CHRNA7-223	ENST00000637033	SH3BGRL2	Q9UJC5	107 aa		10.64	□□□□□ -0.71
CHRNA7-223	ENST00000637033	COLQ	Q9Y215	455 aa	Predicted RBP	10.64	□□□□□ -0.71
CHRNA7-223	ENST00000637033	ANKRD11	Q6UB99	2663 aa	Predicted RBP	10.64	□□□□□ -0.71
CHRNA7-223	ENST00000637033	C21orf140	B9A014	251 aa		10.64	□□□□□ -0.71
CHRNA7-223	ENST00000637033	CCL3L1	P16619	93 aa		10.64	□□□□□ -0.71
CHRNA7-223	ENST00000637033	SELENOT	P62341	195 aa		10.64	□□□□□ -0.71
CHRNA7-223	ENST00000637033	SLC35D1	Q9NTN3	355 aa		10.64	□□□□□ -0.71
CHRNA7-223	ENST00000637033	JPT1	Q9UK76	154 aa		10.64	□□□□□ -0.71
CHRNA7-223	ENST00000637033	APC2	O95996	2303 aa		10.64	□□□□□ -0.71
CHRNA7-223	ENST00000637033	TRGV10	A0A0A0MS01	117 aa		10.63	□□□□□ -0.71
CHRNA7-223	ENST00000637033	ORM2	P19652	201 aa		10.63	□□□□□ -0.71
CHRNA7-223	ENST00000637033	TNXA	Q16473	311 aa		10.63	□□□□□ -0.71
CHRNA7-223	ENST00000637033	DPRX	A6NFQ7	191 aa		10.63	□□□□□ -0.71
CHRNA7-223	ENST00000637033	SRRM5	B3KS81	715 aa		10.63	□□□□□ -0.71
CHRNA7-223	ENST00000637033	APCS	P02743	223 aa		10.63	□□□□□ -0.71
CHRNA7-223	ENST00000637033	HNRNPA3	P51991	378 aa	Known RBP	10.63	□□□□□ -0.71
CHRNA7-223	ENST00000637033	BORCS7	Q96B45	105 aa		10.63	□□□□□ -0.71
CHRNA7-223	ENST00000637033	ZNF331	Q9NQX6	463 aa	Predicted RBP	10.63	□□□□□ -0.71
CHRNA7-223	ENST00000637033	PTPRB	P23467	1997 aa		10.63	□□□□□ -0.71
CHRNA7-223	ENST00000637033	MOS	P00540	346 aa		10.63	□□□□□ -0.71
CHRNA7-223	ENST00000637033	CD59	P13987	128 aa		10.63	□□□□□ -0.71
CHRNA7-223	ENST00000637033	PRR20E	P86478	221 aa		10.63	□□□□□ -0.71
CHRNA7-223	ENST00000637033	PRR20C	P86479	221 aa		10.63	□□□□□ -0.71
CHRNA7-223	ENST00000637033	PRR20D	P86480	221 aa		10.63	□□□□□ -0.71
CHRNA7-223	ENST00000637033	PRR20B	P86481	221 aa		10.63	□□□□□ -0.71
CHRNA7-223	ENST00000637033	PRR20A	P86496	221 aa		10.63	□□□□□ -0.71
CHRNA7-223	ENST00000637033	RUSC1-AS1	Q66K80	236 aa		10.63	□□□□□ -0.71
CHRNA7-223	ENST00000637033		Q8N976	141 aa		10.63	□□□□□ -0.71
CHRNA7-223	ENST00000637033	PRR7	Q8TB68	274 aa		10.63	□□□□□ -0.71
CHRNA7-223	ENST00000637033	TSKU	Q8WUA8	353 aa		10.63	□□□□□ -0.71
CHRNA7-223	ENST00000637033	GSX1	Q9H4S2	264 aa	Predicted RBP	10.63	□□□□□ -0.71
CHRNA7-223	ENST00000637033	SAA1	P0DJI8	122 aa	Predicted RBP	10.62	□□□□□ -0.71
CHRNA7-223	ENST00000637033	ZNF138	P52744	262 aa		10.62	□□□□□ -0.71
CHRNA7-223	ENST00000637033	CX3CL1	P78423	397 aa		10.62	□□□□□ -0.71
CHRNA7-223	ENST00000637033	HCP5	Q6MZN7	132 aa		10.62	□□□□□ -0.71
CHRNA7-223	ENST00000637033	TCF24	Q7RTU0	167 aa		10.62	□□□□□ -0.71
CHRNA7-223	ENST00000637033	PMCHL2	Q9BQD1	86 aa		10.62	□□□□□ -0.71
CHRNA7-223	ENST00000637033	CLEC7A	Q9BXN2	247 aa		10.62	□□□□□ -0.71
CHRNA7-223	ENST00000637033	TECR	Q9NZ01	308 aa	Known RBP	10.62	□□□□□ -0.71
CHRNA7-223	ENST00000637033	SLC45A2	Q9UMX9	530 aa		10.62	□□□□□ -0.71
CHRNA7-223	ENST00000637033	TEX50	A0A1B0GTY4	177 aa		10.62	□□□□□ -0.71
CHRNA7-223	ENST00000637033	ISLR	O14498	428 aa		10.62	□□□□□ -0.71
CHRNA7-223	ENST00000637033	HYPM	O75409	117 aa		10.62	□□□□□ -0.71
CHRNA7-223	ENST00000637033	HSBP1	O75506	76 aa		10.62	□□□□□ -0.71
CHRNA7-223	ENST00000637033	GDF5OS	Q5U4N7	250 aa		10.62	□□□□□ -0.71
CHRNA7-223	ENST00000637033	NPIPB3	Q92617	1050 aa		10.62	□□□□□ -0.71
CHRNA7-223	ENST00000637033		A0A1W2PRD5	423 aa		10.62	□□□□□ -0.71
CHRNA7-223	ENST00000637033		A0A1W2PRF3	423 aa		10.62	□□□□□ -0.71
CHRNA7-223	ENST00000637033		A0A1W2PRM7	423 aa		10.62	□□□□□ -0.71
CHRNA7-223	ENST00000637033	CDX4	O14627	284 aa	Predicted RBP	10.62	□□□□□ -0.71
CHRNA7-223	ENST00000637033	ZNF324	O75467	553 aa	Predicted RBP	10.62	□□□□□ -0.71
CHRNA7-223	ENST00000637033		Q71RC1	249 aa	Predicted RBP	10.62	□□□□□ -0.71
CHRNA7-223	ENST00000637033	PPP1R35	Q8TAP8	253 aa		10.62	□□□□□ -0.71
CHRNA7-223	ENST00000637033	C20orf144	Q9BQM9	153 aa		10.62	□□□□□ -0.71

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