RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 RPL39P5Q59GN2 51 aa9.45□□□□□ -0.9
CLN6-217ENST00000636964 DCHS2Q6V1P9 2916 aa9.45□□□□□ -0.9
CLN6-217ENST00000636964 CENPVQ7Z7K6 275 aaPredicted RBP9.45□□□□□ -0.9
CLN6-217ENST00000636964 RPRMQ9NS64 109 aa9.45□□□□□ -0.9
CLN6-217ENST00000636964 OR6C3Q9NZP0 311 aa9.45□□□□□ -0.9
CLN6-217ENST00000636964 WNK2Q9Y3S1 2297 aa9.45□□□□□ -0.9
CLN6-217ENST00000636964 TRAV1-1A0A0B4J248 108 aa9.45□□□□□ -0.9
CLN6-217ENST00000636964 SNAI2O43623 268 aa9.45□□□□□ -0.9
CLN6-217ENST00000636964 MMP23AO75900 390 aa9.45□□□□□ -0.9
CLN6-217ENST00000636964 S1PR2O95136 353 aa9.45□□□□□ -0.9
CLN6-217ENST00000636964 SCGB1A1P11684 91 aa9.45□□□□□ -0.9
CLN6-217ENST00000636964 GPR12P47775 334 aa9.45□□□□□ -0.9
CLN6-217ENST00000636964 LYPD2Q6UXB3 125 aa9.45□□□□□ -0.9
CLN6-217ENST00000636964 TCF23Q7RTU1 214 aa9.45□□□□□ -0.9
CLN6-217ENST00000636964 ACY3Q96HD9 319 aa9.45□□□□□ -0.9
CLN6-217ENST00000636964 MIEN1Q9BRT3 115 aa9.45□□□□□ -0.9
CLN6-217ENST00000636964 TMEM106BQ9NUM4 274 aa9.45□□□□□ -0.9
CLN6-217ENST00000636964 PPIAL4EA0A075B759 164 aa9.44□□□□□ -0.9
CLN6-217ENST00000636964 TRAV30A0A087WSZ9 112 aa9.44□□□□□ -0.9
CLN6-217ENST00000636964 ZNF705FA8MVS1 300 aaPredicted RBP9.44□□□□□ -0.9
CLN6-217ENST00000636964 PPIAL4DF5H284 164 aa9.44□□□□□ -0.9
CLN6-217ENST00000636964 TMEM178BH3BS89 294 aa9.44□□□□□ -0.9
CLN6-217ENST00000636964 SCGB2A1O75556 95 aa9.44□□□□□ -0.9
CLN6-217ENST00000636964 ZNF705DP0CH99 300 aaPredicted RBP9.44□□□□□ -0.9
CLN6-217ENST00000636964 ZNF705BP0CI00 300 aaPredicted RBP9.44□□□□□ -0.9
CLN6-217ENST00000636964 PPIAL4FP0DN26 164 aa9.44□□□□□ -0.9
CLN6-217ENST00000636964 IAPPP10997 89 aa9.44□□□□□ -0.9
CLN6-217ENST00000636964 TEX36Q5VZQ5 186 aa9.44□□□□□ -0.9
CLN6-217ENST00000636964 LCN15Q6UWW0 184 aa9.44□□□□□ -0.9
CLN6-217ENST00000636964 OR1N2Q8NGR9 330 aa9.44□□□□□ -0.9
CLN6-217ENST00000636964 TMEM18Q96B42 140 aa9.44□□□□□ -0.9
CLN6-217ENST00000636964 RSG1Q9BU20 258 aa9.44□□□□□ -0.9
CLN6-217ENST00000636964 AURKAIP1Q9NWT8 199 aaPredicted RBP9.44□□□□□ -0.9
CLN6-217ENST00000636964 CSMD1Q96PZ7 3565 aa9.44□□□□□ -0.9
CLN6-217ENST00000636964 DSCAML1Q8TD84 2053 aa9.44□□□□□ -0.9
CLN6-217ENST00000636964 TRGV10A0A0A0MS01 117 aa9.44□□□□□ -0.9
CLN6-217ENST00000636964 RNF212BA8MTL3 300 aa9.44□□□□□ -0.9
CLN6-217ENST00000636964 FCN3O75636 299 aa9.44□□□□□ -0.9
CLN6-217ENST00000636964 CGB3P0DN86 165 aa9.44□□□□□ -0.9
CLN6-217ENST00000636964 CGB7P0DN87 165 aa9.44□□□□□ -0.9
CLN6-217ENST00000636964 UQCRFS1P47985 274 aa9.44□□□□□ -0.9
CLN6-217ENST00000636964 EIF4EBP1Q13541 118 aaPredicted RBP9.44□□□□□ -0.9
CLN6-217ENST00000636964 FBXL19-AS1Q494R0 122 aa9.44□□□□□ -0.9
CLN6-217ENST00000636964 C1orf229Q6ZS94 237 aaPredicted RBP9.44□□□□□ -0.9
CLN6-217ENST00000636964 MS4A5Q9H3V2 200 aa9.44□□□□□ -0.9
CLN6-217ENST00000636964 GEMIN7Q9H840 131 aaKnown RBP9.44□□□□□ -0.9
CLN6-217ENST00000636964 DOCK11Q5JSL3 2073 aa9.44□□□□□ -0.9
CLN6-217ENST00000636964 PSG1P11464 419 aa9.44□□□□□ -0.9
CLN6-217ENST00000636964 ADIRFQ15847 76 aa9.44□□□□□ -0.9
CLN6-217ENST00000636964 TBX15Q96SF7 602 aa9.44□□□□□ -0.9
CLN6-217ENST00000636964 CTDSP1Q9GZU7 261 aa9.44□□□□□ -0.9
CLN6-217ENST00000636964 RBKSQ9H477 322 aa9.44□□□□□ -0.9
CLN6-217ENST00000636964 ZNRD1Q9P1U0 126 aa9.44□□□□□ -0.9
CLN6-217ENST00000636964 SLC25A10Q9UBX3 287 aaPredicted RBP9.44□□□□□ -0.9
CLN6-217ENST00000636964 JPT1Q9UK76 154 aa9.44□□□□□ -0.9
CLN6-217ENST00000636964 TRAV38-1A0A0B4J264 116 aa9.43□□□□□ -0.9
CLN6-217ENST00000636964 KBTBD11-OT1A0A1B0GTJ5 212 aa9.43□□□□□ -0.9
CLN6-217ENST00000636964 TAS2R30P59541 319 aa9.43□□□□□ -0.9
CLN6-217ENST00000636964 RPL23P62829 140 aaKnown RBP9.43□□□□□ -0.9
CLN6-217ENST00000636964 CATR1Q13166 79 aa9.43□□□□□ -0.9
CLN6-217ENST00000636964 MMDQ15546 238 aa9.43□□□□□ -0.9
CLN6-217ENST00000636964 CR1LQ2VPA4 569 aa9.43□□□□□ -0.9
CLN6-217ENST00000636964 MUC15Q8N387 334 aa9.43□□□□□ -0.9
CLN6-217ENST00000636964 STPG4Q8N801 248 aa9.43□□□□□ -0.9
CLN6-217ENST00000636964 ZBTB34Q8NCN2 500 aa9.43□□□□□ -0.9
CLN6-217ENST00000636964 CLN8Q9UBY8 286 aa9.43□□□□□ -0.9
CLN6-217ENST00000636964 COX11Q9Y6N1 276 aa9.43□□□□□ -0.9
CLN6-217ENST00000636964 KIAA1324LA8MWY0 1029 aaPredicted RBP9.43□□□□□ -0.9
CLN6-217ENST00000636964 M0R1X1 148 aa9.43□□□□□ -0.9
CLN6-217ENST00000636964 F2RL2O00254 374 aa9.43□□□□□ -0.9
CLN6-217ENST00000636964 GALR1P47211 349 aa9.43□□□□□ -0.9
CLN6-217ENST00000636964 H1FXQ92522 213 aaKnown RBP9.43□□□□□ -0.9
CLN6-217ENST00000636964 LSM10Q969L4 123 aaKnown RBP9.43□□□□□ -0.9
CLN6-217ENST00000636964 TANC2Q9HCD6 1990 aa9.43□□□□□ -0.9
CLN6-217ENST00000636964 PDE6DO43924 150 aa9.43□□□□□ -0.9
CLN6-217ENST00000636964 FCGR3BO75015 233 aa9.43□□□□□ -0.9
CLN6-217ENST00000636964 LINC00310P59036 64 aa9.43□□□□□ -0.9
CLN6-217ENST00000636964 M0QXV9 152 aa9.42□□□□□ -0.9
CLN6-217ENST00000636964 LY6HO94772 140 aa9.42□□□□□ -0.9
CLN6-217ENST00000636964 WNT2P09544 360 aa9.42□□□□□ -0.9
CLN6-217ENST00000636964 PPIAL4GP0DN37 164 aa9.42□□□□□ -0.9
CLN6-217ENST00000636964 CCL3L1P16619 93 aa9.42□□□□□ -0.9
CLN6-217ENST00000636964 TMEM267Q0VDI3 215 aaPredicted RBP9.42□□□□□ -0.9
CLN6-217ENST00000636964 PSG3Q16557 428 aa9.42□□□□□ -0.9
CLN6-217ENST00000636964 CT45A1Q5HYN5 189 aa9.42□□□□□ -0.9
CLN6-217ENST00000636964 ZNF787Q6DD87 383 aa9.42□□□□□ -0.9
CLN6-217ENST00000636964 OR8I2Q8N0Y5 310 aa9.42□□□□□ -0.9
CLN6-217ENST00000636964 SMIM20Q8N5G0 67 aa9.42□□□□□ -0.9
CLN6-217ENST00000636964 CT45A3Q8NHU0 189 aa9.42□□□□□ -0.9
CLN6-217ENST00000636964 GNPNAT1Q96EK6 184 aaPredicted RBP9.42□□□□□ -0.9
CLN6-217ENST00000636964 IFI27L2Q9H2X8 130 aa9.42□□□□□ -0.9
CLN6-217ENST00000636964 TP53TG3Q9ULZ0 132 aa9.42□□□□□ -0.9
CLN6-217ENST00000636964 PPIAL4CA0A0B4J2A2 164 aa9.42□□□□□ -0.9
CLN6-217ENST00000636964 IGHV1-69-2A0A0G2JMI3 117 aa9.42□□□□□ -0.9
CLN6-217ENST00000636964 PPP5D1E7EU14 171 aa9.42□□□□□ -0.9
CLN6-217ENST00000636964 ZG16O60844 167 aa9.42□□□□□ -0.9
CLN6-217ENST00000636964 HBE1P02100 147 aa9.42□□□□□ -0.9
CLN6-217ENST00000636964 AZU1P20160 251 aa9.42□□□□□ -0.9
CLN6-217ENST00000636964 DUTP33316 252 aaKnown RBP9.42□□□□□ -0.9
CLN6-217ENST00000636964 RPL31P62899 125 aaKnown RBP9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms