RNA–Protein interactions for RNA: ENST00000636571.1

CTSD-207, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,790 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-207ENST00000636571 TMEM252Q8N6L7 170 aa12.1□□□□□ -0.47
CTSD-207ENST00000636571 CITED2Q99967 270 aaPredicted RBP12.1□□□□□ -0.47
CTSD-207ENST00000636571 SMIM3Q9BZL3 60 aa12.1□□□□□ -0.47
CTSD-207ENST00000636571 CACFD1Q9UGQ2 172 aa12.1□□□□□ -0.47
CTSD-207ENST00000636571 HMSDA8MTL9 139 aa12.1□□□□□ -0.47
CTSD-207ENST00000636571 IGLV1-40P01703 118 aa12.1□□□□□ -0.47
CTSD-207ENST00000636571 IGHG4P01861 327 aa12.1□□□□□ -0.47
CTSD-207ENST00000636571 RPLP1P05386 114 aaKnown RBP12.1□□□□□ -0.47
CTSD-207ENST00000636571 SNCAP37840 140 aa12.1□□□□□ -0.47
CTSD-207ENST00000636571 SLC35B1P78383 322 aa12.1□□□□□ -0.47
CTSD-207ENST00000636571 EWSR1Q01844 656 aaKnown RBP eCLIP12.1□□□□□ -0.47
CTSD-207ENST00000636571 LAMTOR1Q6IAA8 161 aa12.1□□□□□ -0.47
CTSD-207ENST00000636571 OR8G2PQ6IF36 304 aa12.1□□□□□ -0.47
CTSD-207ENST00000636571 C9orf62Q8N4C0 152 aa12.1□□□□□ -0.47
CTSD-207ENST00000636571 TMEM217Q8N7C4 229 aa12.1□□□□□ -0.47
CTSD-207ENST00000636571 C3orf56Q8N813 242 aa12.1□□□□□ -0.47
CTSD-207ENST00000636571 SLC24A4Q8NFF2 622 aa12.1□□□□□ -0.47
CTSD-207ENST00000636571 TMEM170AQ8WVE7 144 aa12.1□□□□□ -0.47
CTSD-207ENST00000636571 STRAPQ9Y3F4 350 aaKnown RBP12.1□□□□□ -0.47
CTSD-207ENST00000636571 HSPB11Q9Y547 144 aa12.1□□□□□ -0.47
CTSD-207ENST00000636571 C15orf62A8K5M9 175 aa12.09□□□□□ -0.47
CTSD-207ENST00000636571 TSC22D2O75157 780 aa12.09□□□□□ -0.47
CTSD-207ENST00000636571 FBXO24O75426 580 aa12.09□□□□□ -0.47
CTSD-207ENST00000636571 PF4V1P10720 104 aa12.09□□□□□ -0.47
CTSD-207ENST00000636571 PSMB8P28062 276 aa12.09□□□□□ -0.47
CTSD-207ENST00000636571 TAS2R30P59541 319 aa12.09□□□□□ -0.47
CTSD-207ENST00000636571 ACOT7LQ6ZUV0 252 aa12.09□□□□□ -0.47
CTSD-207ENST00000636571 CITED1Q99966 193 aa12.09□□□□□ -0.47
CTSD-207ENST00000636571 ZNF355PQ9NSJ1 428 aa12.09□□□□□ -0.47
CTSD-207ENST00000636571 A0A1W2PRX2 142 aa12.08□□□□□ -0.48
CTSD-207ENST00000636571 NPY1RP25929 384 aa12.08□□□□□ -0.48
CTSD-207ENST00000636571 ARL16Q0P5N6 197 aa12.08□□□□□ -0.48
CTSD-207ENST00000636571 KHDC1LQ5JSQ8 128 aa12.08□□□□□ -0.48
CTSD-207ENST00000636571 TEX38Q6PEX7 206 aa12.08□□□□□ -0.48
CTSD-207ENST00000636571 TTC9CQ8N5M4 171 aa12.08□□□□□ -0.48
CTSD-207ENST00000636571 FAM110DQ8TAY7 271 aaPredicted RBP12.08□□□□□ -0.48
CTSD-207ENST00000636571 P2RX4Q99571 388 aa12.08□□□□□ -0.48
CTSD-207ENST00000636571 ZNF747Q9BV97 191 aa12.08□□□□□ -0.48
CTSD-207ENST00000636571 GON7Q9BXV9 100 aa12.08□□□□□ -0.48
CTSD-207ENST00000636571 DMRT1Q9Y5R6 373 aa12.08□□□□□ -0.48
CTSD-207ENST00000636571 OR8U8P0C7N1 319 aa12.07□□□□□ -0.48
CTSD-207ENST00000636571 RNASE2P10153 161 aaKnown RBP12.07□□□□□ -0.48
CTSD-207ENST00000636571 CTRB1P17538 263 aa12.07□□□□□ -0.48
CTSD-207ENST00000636571 CTRB2Q6GPI1 263 aa12.07□□□□□ -0.48
CTSD-207ENST00000636571 TMEM14EPQ6UXP3 125 aa12.07□□□□□ -0.48
CTSD-207ENST00000636571 HAPLN4Q86UW8 402 aa12.07□□□□□ -0.48
CTSD-207ENST00000636571 OR4X2Q8NGF9 303 aa12.07□□□□□ -0.48
CTSD-207ENST00000636571 AQP10Q96PS8 301 aa12.07□□□□□ -0.48
CTSD-207ENST00000636571 SLC25A31Q9H0C2 315 aa12.07□□□□□ -0.48
CTSD-207ENST00000636571 U3KQ87 197 aa12.07□□□□□ -0.48
CTSD-207ENST00000636571 IFNA4P05014 189 aa12.07□□□□□ -0.48
CTSD-207ENST00000636571 HTR2BP41595 481 aa12.07□□□□□ -0.48
CTSD-207ENST00000636571 RAB9AP51151 201 aa12.07□□□□□ -0.48
CTSD-207ENST00000636571 MFAP2P55001 183 aa12.07□□□□□ -0.48
CTSD-207ENST00000636571 RPP30P78346 268 aaKnown RBP12.07□□□□□ -0.48
CTSD-207ENST00000636571 KIAA0141Q14154 515 aaPredicted RBP12.07□□□□□ -0.48
CTSD-207ENST00000636571 ETV3LQ6ZN32 361 aa12.07□□□□□ -0.48
CTSD-207ENST00000636571 TMUB2Q71RG4 321 aa12.07□□□□□ -0.48
CTSD-207ENST00000636571 STX12Q86Y82 276 aa12.07□□□□□ -0.48
CTSD-207ENST00000636571 ARL6Q9H0F7 186 aa12.07□□□□□ -0.48
CTSD-207ENST00000636571 CMYA5Q8N3K9 4069 aa12.07□□□□□ -0.48
CTSD-207ENST00000636571 TCRBV4S1A1TA0A5B7 111 aa12.06□□□□□ -0.48
CTSD-207ENST00000636571 NPIPB5A8MRT5 1133 aa12.06□□□□□ -0.48
CTSD-207ENST00000636571 ADARB2-AS1A8MUL3 147 aa12.06□□□□□ -0.48
CTSD-207ENST00000636571 DEFA4P12838 97 aa12.06□□□□□ -0.48
CTSD-207ENST00000636571 SULT1A1P50225 295 aa12.06□□□□□ -0.48
CTSD-207ENST00000636571 FOXE3Q13461 319 aa12.06□□□□□ -0.48
CTSD-207ENST00000636571 CLINT1Q14677 625 aa12.06□□□□□ -0.48
CTSD-207ENST00000636571 MRPL41Q8IXM3 137 aaKnown RBP12.06□□□□□ -0.48
CTSD-207ENST00000636571 TMEM68Q96MH6 324 aa12.06□□□□□ -0.48
CTSD-207ENST00000636571 OR5B12Q96R08 314 aa12.06□□□□□ -0.48
CTSD-207ENST00000636571 VWFP04275 2813 aa12.06□□□□□ -0.48
CTSD-207ENST00000636571 IGHV3-21A0A0B4J1V1 117 aa12.05□□□□□ -0.48
CTSD-207ENST00000636571 INS-IGF2F8WCM5 200 aa12.05□□□□□ -0.48
CTSD-207ENST00000636571 TRGV3P03979 118 aa12.05□□□□□ -0.48
CTSD-207ENST00000636571 CRYGCP07315 174 aa12.05□□□□□ -0.48
CTSD-207ENST00000636571 ELANEP08246 267 aa12.05□□□□□ -0.48
CTSD-207ENST00000636571 TPPP2P59282 170 aa12.05□□□□□ -0.48
CTSD-207ENST00000636571 RAB11AP62491 216 aa12.05□□□□□ -0.48
CTSD-207ENST00000636571 OR2F1Q13607 317 aa12.05□□□□□ -0.48
CTSD-207ENST00000636571 MLANAQ16655 118 aa12.05□□□□□ -0.48
CTSD-207ENST00000636571 BSXQ3C1V8 233 aa12.05□□□□□ -0.48
CTSD-207ENST00000636571 NSUN5P1Q3KNT7 163 aa12.05□□□□□ -0.48
CTSD-207ENST00000636571 SLC25A24Q6NUK1 477 aa12.05□□□□□ -0.48
CTSD-207ENST00000636571 KCNRGQ8N5I3 272 aa12.05□□□□□ -0.48
CTSD-207ENST00000636571 OR5C1Q8NGR4 320 aa12.05□□□□□ -0.48
CTSD-207ENST00000636571 PINX1Q96BK5 328 aaKnown RBP12.05□□□□□ -0.48
CTSD-207ENST00000636571 MISP3Q96FF7 219 aa12.05□□□□□ -0.48
CTSD-207ENST00000636571 FANCD2OSQ96PS1 177 aa12.05□□□□□ -0.48
CTSD-207ENST00000636571 FBXL17Q9UF56 701 aa12.05□□□□□ -0.48
CTSD-207ENST00000636571 S4R3C0 116 aa12.05□□□□□ -0.48
CTSD-207ENST00000636571 PMS2P5A8MQ11 134 aa12.05□□□□□ -0.48
CTSD-207ENST00000636571 OR2J3O76001 311 aa12.05□□□□□ -0.48
CTSD-207ENST00000636571 IGHV3-11P01762 117 aa12.05□□□□□ -0.48
CTSD-207ENST00000636571 IGHV3-48P01763 117 aa12.05□□□□□ -0.48
CTSD-207ENST00000636571 IFITM2Q01629 132 aa12.05□□□□□ -0.48
CTSD-207ENST00000636571 C2orf83Q53S99 150 aa12.05□□□□□ -0.48
CTSD-207ENST00000636571 RNF152Q8N8N0 203 aa12.05□□□□□ -0.48
CTSD-207ENST00000636571 GNB4Q9HAV0 340 aa12.05□□□□□ -0.48
CTSD-207ENST00000636571 WFDC1Q9HC57 220 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms