RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 HOXA1P49639 335 aaPredicted RBP13.37□□□□□ -0.27
PNKP-225ENST00000636214 SUB1P53999 127 aaKnown RBP eCLIP13.37□□□□□ -0.27
PNKP-225ENST00000636214 SPINK9Q5DT21 86 aa13.37□□□□□ -0.27
PNKP-225ENST00000636214 TMEM116Q8NCL8 245 aa13.37□□□□□ -0.27
PNKP-225ENST00000636214 RRNAD1Q96FB5 475 aaKnown RBP13.37□□□□□ -0.27
PNKP-225ENST00000636214 GINS3Q9BRX5 216 aa13.37□□□□□ -0.27
PNKP-225ENST00000636214 SACSQ9NZJ4 4579 aa13.36□□□□□ -0.27
PNKP-225ENST00000636214 F8W735 103 aaPredicted RBP13.36□□□□□ -0.27
PNKP-225ENST00000636214 I3L2K1 104 aa13.36□□□□□ -0.27
PNKP-225ENST00000636214 SCGB2A1O75556 95 aa13.36□□□□□ -0.27
PNKP-225ENST00000636214 FCGR2BP31994 310 aaPredicted RBP13.36□□□□□ -0.27
PNKP-225ENST00000636214 MRPS10P82664 201 aaKnown RBP13.36□□□□□ -0.27
PNKP-225ENST00000636214 LHFPL1Q86WI0 220 aa13.36□□□□□ -0.27
PNKP-225ENST00000636214 TMEM229BQ8NBD8 167 aa13.36□□□□□ -0.27
PNKP-225ENST00000636214 DUSP18Q8NEJ0 188 aa13.36□□□□□ -0.27
PNKP-225ENST00000636214 TERB2Q8NHR7 220 aa13.36□□□□□ -0.27
PNKP-225ENST00000636214 TP53RKQ96S44 253 aa13.36□□□□□ -0.27
PNKP-225ENST00000636214 SMPXQ9UHP9 88 aa13.36□□□□□ -0.27
PNKP-225ENST00000636214 C14orf166Q9Y224 244 aaKnown RBP13.36□□□□□ -0.27
PNKP-225ENST00000636214 IGHV7-4-1A0A0J9YVY3 117 aa13.35□□□□□ -0.27
PNKP-225ENST00000636214 UBE2CO00762 179 aa13.35□□□□□ -0.27
PNKP-225ENST00000636214 B3GALNT1O75752 331 aa13.35□□□□□ -0.27
PNKP-225ENST00000636214 CMC4P56277 68 aaPredicted RBP13.35□□□□□ -0.27
PNKP-225ENST00000636214 SSBP1Q04837 148 aaKnown RBP13.35□□□□□ -0.27
PNKP-225ENST00000636214 MEF2DQ14814 521 aa13.35□□□□□ -0.27
PNKP-225ENST00000636214 STEAP1BQ6NZ63 245 aa13.35□□□□□ -0.27
PNKP-225ENST00000636214 STPG3Q8N7X2 389 aa13.35□□□□□ -0.27
PNKP-225ENST00000636214 OVOL2Q9BRP0 275 aa13.35□□□□□ -0.27
PNKP-225ENST00000636214 RHPN1-AS1Q9BWJ2 59 aa13.35□□□□□ -0.27
PNKP-225ENST00000636214 NXF2Q9GZY0 626 aaKnown RBP13.35□□□□□ -0.27
PNKP-225ENST00000636214 LYSTQ99698 3801 aa13.34□□□□□ -0.27
PNKP-225ENST00000636214 TRAV14DV4A0A0A6YYC5 116 aa13.34□□□□□ -0.27
PNKP-225ENST00000636214 DISC1C4P0D8 188 aa13.34□□□□□ -0.27
PNKP-225ENST00000636214 GABARAPH6UMI1 98 aa13.34□□□□□ -0.27
PNKP-225ENST00000636214 CORTO00230 105 aa13.34□□□□□ -0.27
PNKP-225ENST00000636214 IGHV3-48P01763 117 aa13.34□□□□□ -0.27
PNKP-225ENST00000636214 PAFAH1B2P68402 229 aa13.34□□□□□ -0.27
PNKP-225ENST00000636214 IZUMO4Q1ZYL8 232 aa13.34□□□□□ -0.27
PNKP-225ENST00000636214 OR13C8Q8NGS7 320 aa13.34□□□□□ -0.27
PNKP-225ENST00000636214 ABHD1Q96SE0 405 aa13.34□□□□□ -0.27
PNKP-225ENST00000636214 IGHV3-49A0A0A0MS15 119 aa13.33□□□□□ -0.28
PNKP-225ENST00000636214 TEX13DA0A0J9YY54 714 aaPredicted RBP13.33□□□□□ -0.28
PNKP-225ENST00000636214 CHEK1O14757 476 aa13.33□□□□□ -0.28
PNKP-225ENST00000636214 ST8SIA3O43173 380 aa13.33□□□□□ -0.28
PNKP-225ENST00000636214 IGKV1-5P01602 117 aa13.33□□□□□ -0.28
PNKP-225ENST00000636214 CD74P04233 296 aa13.33□□□□□ -0.28
PNKP-225ENST00000636214 CD5P06127 495 aa13.33□□□□□ -0.28
PNKP-225ENST00000636214 DEFB135Q30KP9 77 aa13.33□□□□□ -0.28
PNKP-225ENST00000636214 ODF3L2Q3SX64 289 aa13.33□□□□□ -0.28
PNKP-225ENST00000636214 Q6ZWC4 215 aa13.33□□□□□ -0.28
PNKP-225ENST00000636214 OR4D10Q8NGI6 311 aa13.33□□□□□ -0.28
PNKP-225ENST00000636214 MARCH1Q8TCQ1 289 aa13.33□□□□□ -0.28
PNKP-225ENST00000636214 GALNT14Q96FL9 552 aa13.33□□□□□ -0.28
PNKP-225ENST00000636214 OR10C1Q96KK4 312 aa13.33□□□□□ -0.28
PNKP-225ENST00000636214 RNF2Q99496 336 aa13.33□□□□□ -0.28
PNKP-225ENST00000636214 RABL2AQ9UBK7 228 aaPredicted RBP13.33□□□□□ -0.28
PNKP-225ENST00000636214 RABL2BQ9UNT1 228 aa13.33□□□□□ -0.28
PNKP-225ENST00000636214 TP53TG1Q9Y2A0 90 aa13.33□□□□□ -0.28
PNKP-225ENST00000636214 IGKV3-7A0A075B6H7 116 aa13.32□□□□□ -0.28
PNKP-225ENST00000636214 KIR2DL5BA0A0G2JN68 375 aa13.32□□□□□ -0.28
PNKP-225ENST00000636214 KIR2DL5BA0A0G2JPC4 375 aa13.32□□□□□ -0.28
PNKP-225ENST00000636214 SPRY2O43597 315 aa13.32□□□□□ -0.28
PNKP-225ENST00000636214 NOL3O60936 208 aaKnown RBP13.32□□□□□ -0.28
PNKP-225ENST00000636214 RPL35AP18077 110 aaKnown RBP13.32□□□□□ -0.28
PNKP-225ENST00000636214 TFPI2P48307 235 aa13.32□□□□□ -0.28
PNKP-225ENST00000636214 IL18Q14116 193 aa13.32□□□□□ -0.28
PNKP-225ENST00000636214 SP6Q3SY56 376 aa13.32□□□□□ -0.28
PNKP-225ENST00000636214 ZNF600Q6ZNG1 722 aa13.32□□□□□ -0.28
PNKP-225ENST00000636214 FAM219AQ8IW50 185 aa13.32□□□□□ -0.28
PNKP-225ENST00000636214 KIR2DL5AQ8N109 375 aa13.32□□□□□ -0.28
PNKP-225ENST00000636214 KIR2DL5BQ8NHK3 375 aa13.32□□□□□ -0.28
PNKP-225ENST00000636214 IGHV3OR16-13A0A075B7E8 117 aa13.31□□□□□ -0.28
PNKP-225ENST00000636214 IGHV3-74A0A0B4J1X5 117 aa13.31□□□□□ -0.28
PNKP-225ENST00000636214 A0A0B4J293 547 aa13.31□□□□□ -0.28
PNKP-225ENST00000636214 CXorf65A6NEN9 183 aa13.31□□□□□ -0.28
PNKP-225ENST00000636214 UCP1P25874 307 aa13.31□□□□□ -0.28
PNKP-225ENST00000636214 OPRK1P41145 380 aa13.31□□□□□ -0.28
PNKP-225ENST00000636214 CLVS1Q8IUQ0 354 aaPredicted RBP13.31□□□□□ -0.28
PNKP-225ENST00000636214 DIRAS2Q96HU8 199 aa13.31□□□□□ -0.28
PNKP-225ENST00000636214 TMEM231Q9H6L2 316 aa13.31□□□□□ -0.28
PNKP-225ENST00000636214 INS-IGF2F8WCM5 200 aa13.3□□□□□ -0.28
PNKP-225ENST00000636214 DNASE2O00115 360 aaPredicted RBP13.3□□□□□ -0.28
PNKP-225ENST00000636214 P0C879 139 aa13.3□□□□□ -0.28
PNKP-225ENST00000636214 ETV6P41212 452 aa13.3□□□□□ -0.28
PNKP-225ENST00000636214 RPL11P62913 178 aaKnown RBP13.3□□□□□ -0.28
PNKP-225ENST00000636214 SURF2Q15527 256 aaPredicted RBP13.3□□□□□ -0.28
PNKP-225ENST00000636214 WFDC3Q8IUB2 231 aa13.3□□□□□ -0.28
PNKP-225ENST00000636214 TMEM217Q8N7C4 229 aa13.3□□□□□ -0.28
PNKP-225ENST00000636214 RAB2BQ8WUD1 216 aa13.3□□□□□ -0.28
PNKP-225ENST00000636214 SMIM4Q8WVI0 70 aa13.3□□□□□ -0.28
PNKP-225ENST00000636214 NARS2Q96I59 477 aaKnown RBP13.3□□□□□ -0.28
PNKP-225ENST00000636214 PUS1Q9Y606 427 aaKnown RBP eCLIP13.3□□□□□ -0.28
PNKP-225ENST00000636214 A0A0J9YWU9 116 aa13.29□□□□□ -0.28
PNKP-225ENST00000636214 RPS10-NUDT3A0A1W2PQS6 291 aa13.29□□□□□ -0.28
PNKP-225ENST00000636214 CTDSP2O14595 271 aa13.29□□□□□ -0.28
PNKP-225ENST00000636214 OR5AC1P0C628 307 aa13.29□□□□□ -0.28
PNKP-225ENST00000636214 AKAIN1P0CW23 69 aa13.29□□□□□ -0.28
PNKP-225ENST00000636214 DHODHQ02127 395 aa13.29□□□□□ -0.28
PNKP-225ENST00000636214 PMS2P11Q13670 270 aa13.29□□□□□ -0.28
PNKP-225ENST00000636214 SPCS2Q15005 226 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms