RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 MUC15Q8N387 334 aa12.12□□□□□ -0.47
CACNA1A-220ENST00000635988 GCSAMQ8N6F7 178 aa12.12□□□□□ -0.47
CACNA1A-220ENST00000635988 RNASE8Q8TDE3 154 aaKnown RBP12.12□□□□□ -0.47
CACNA1A-220ENST00000635988 IGLC7A0M8Q6 106 aa12.11□□□□□ -0.47
CACNA1A-220ENST00000635988 CDKN1BP46527 198 aa12.11□□□□□ -0.47
CACNA1A-220ENST00000635988 LCN12Q6JVE5 192 aa12.11□□□□□ -0.47
CACNA1A-220ENST00000635988 CFHR2P36980 270 aa12.11□□□□□ -0.47
CACNA1A-220ENST00000635988 Q56UQ5 140 aa12.11□□□□□ -0.47
CACNA1A-220ENST00000635988 MBNL2Q5VZF2 373 aaKnown RBP12.11□□□□□ -0.47
CACNA1A-220ENST00000635988 ATP5L2Q7Z4Y8 100 aa12.11□□□□□ -0.47
CACNA1A-220ENST00000635988 IGKV1OR2-108A0A075B7D4 117 aa12.1□□□□□ -0.47
CACNA1A-220ENST00000635988 IGHV2-70DA0A0C4DH43 119 aa12.1□□□□□ -0.47
CACNA1A-220ENST00000635988 COL8A2P25067 703 aa12.1□□□□□ -0.47
CACNA1A-220ENST00000635988 UBE2L3P68036 154 aaKnown RBP12.1□□□□□ -0.47
CACNA1A-220ENST00000635988 EBLN2Q6P2I7 272 aa12.1□□□□□ -0.47
CACNA1A-220ENST00000635988 C16orf54Q6UWD8 224 aa12.1□□□□□ -0.47
CACNA1A-220ENST00000635988 C1orf162Q8NEQ5 155 aaPredicted RBP12.1□□□□□ -0.47
CACNA1A-220ENST00000635988 MAFAQ8NHW3 353 aaPredicted RBP12.1□□□□□ -0.47
CACNA1A-220ENST00000635988 ALKBH7Q9BT30 221 aaPredicted RBP12.1□□□□□ -0.47
CACNA1A-220ENST00000635988 TNFRSF19Q9NS68 423 aa12.1□□□□□ -0.47
CACNA1A-220ENST00000635988 CA1P00915 261 aaPredicted RBP12.1□□□□□ -0.47
CACNA1A-220ENST00000635988 IGHV3-13P01766 116 aa12.1□□□□□ -0.47
CACNA1A-220ENST00000635988 IGHV3-7P01780 117 aa12.1□□□□□ -0.47
CACNA1A-220ENST00000635988 SAA2P0DJI9 122 aaPredicted RBP12.1□□□□□ -0.47
CACNA1A-220ENST00000635988 MAJINQ3KP22 176 aa12.1□□□□□ -0.47
CACNA1A-220ENST00000635988 FBLN7Q53RD9 439 aa12.1□□□□□ -0.47
CACNA1A-220ENST00000635988 CT45A1Q5HYN5 189 aa12.1□□□□□ -0.47
CACNA1A-220ENST00000635988 NUP35Q8NFH5 326 aa12.1□□□□□ -0.47
CACNA1A-220ENST00000635988 OR4F17Q8NGA8 305 aa12.1□□□□□ -0.47
CACNA1A-220ENST00000635988 OR1L8Q8NGR8 309 aa12.1□□□□□ -0.47
CACNA1A-220ENST00000635988 CT45A3Q8NHU0 189 aa12.1□□□□□ -0.47
CACNA1A-220ENST00000635988 AMMECR1Q9Y4X0 333 aaPredicted RBP12.1□□□□□ -0.47
CACNA1A-220ENST00000635988 CFAP54Q96N23 3096 aa12.1□□□□□ -0.47
CACNA1A-220ENST00000635988 C9orf172C9J069 976 aa12.09□□□□□ -0.47
CACNA1A-220ENST00000635988 UPK2O00526 184 aa12.09□□□□□ -0.47
CACNA1A-220ENST00000635988 CGB3P0DN86 165 aa12.09□□□□□ -0.47
CACNA1A-220ENST00000635988 CGB7P0DN87 165 aa12.09□□□□□ -0.47
CACNA1A-220ENST00000635988 HIST1H1EP10412 219 aaKnown RBP12.09□□□□□ -0.47
CACNA1A-220ENST00000635988 IGLL1P15814 213 aa12.09□□□□□ -0.47
CACNA1A-220ENST00000635988 C1orf229Q6ZS94 237 aaPredicted RBP12.09□□□□□ -0.47
CACNA1A-220ENST00000635988 CACNG8Q8WXS5 425 aa12.09□□□□□ -0.47
CACNA1A-220ENST00000635988 FAM168AQ92567 244 aa12.09□□□□□ -0.47
CACNA1A-220ENST00000635988 ZNF355PQ9NSJ1 428 aa12.09□□□□□ -0.47
CACNA1A-220ENST00000635988 C2orf70A6NJV1 201 aa12.09□□□□□ -0.47
CACNA1A-220ENST00000635988 RNASEKQ6P5S7 137 aaKnown RBP12.09□□□□□ -0.47
CACNA1A-220ENST00000635988 OR4C5Q8NGB2 326 aa12.09□□□□□ -0.47
CACNA1A-220ENST00000635988 ZNF596Q8TC21 504 aa12.09□□□□□ -0.47
CACNA1A-220ENST00000635988 TMEM70Q9BUB7 260 aa12.09□□□□□ -0.47
CACNA1A-220ENST00000635988 SSBP3Q9BWW4 388 aaPredicted RBP12.09□□□□□ -0.47
CACNA1A-220ENST00000635988 C1RLQ9NZP8 487 aa12.09□□□□□ -0.47
CACNA1A-220ENST00000635988 FZR1Q9UM11 496 aa12.09□□□□□ -0.47
CACNA1A-220ENST00000635988 AGFG2O95081 481 aa12.08□□□□□ -0.48
CACNA1A-220ENST00000635988 GATA2P23769 480 aaPredicted RBP12.08□□□□□ -0.48
CACNA1A-220ENST00000635988 CD69Q07108 199 aa12.08□□□□□ -0.48
CACNA1A-220ENST00000635988 TMEM164Q5U3C3 297 aa12.08□□□□□ -0.48
CACNA1A-220ENST00000635988 NUDT10Q8NFP7 164 aa12.08□□□□□ -0.48
CACNA1A-220ENST00000635988 NUDT11Q96G61 164 aa12.08□□□□□ -0.48
CACNA1A-220ENST00000635988 FAM167A-AS1Q96KT0 104 aa12.08□□□□□ -0.48
CACNA1A-220ENST00000635988 FER1L6-AS2Q96M78 137 aa12.08□□□□□ -0.48
CACNA1A-220ENST00000635988 ZNF714Q96N38 554 aa12.08□□□□□ -0.48
CACNA1A-220ENST00000635988 ST20Q9HBF5 79 aa12.08□□□□□ -0.48
CACNA1A-220ENST00000635988 TRAV30A0A087WSZ9 112 aa12.08□□□□□ -0.48
CACNA1A-220ENST00000635988 CECR9P0C854 216 aa12.08□□□□□ -0.48
CACNA1A-220ENST00000635988 RPS20P60866 119 aaKnown RBP12.08□□□□□ -0.48
CACNA1A-220ENST00000635988 LRRC10Q5BKY1 277 aa12.08□□□□□ -0.48
CACNA1A-220ENST00000635988 LYG1Q8N1E2 194 aa12.08□□□□□ -0.48
CACNA1A-220ENST00000635988 OR2Z1Q8NG97 314 aa12.08□□□□□ -0.48
CACNA1A-220ENST00000635988 SNRNP40Q96DI7 357 aaKnown RBP12.08□□□□□ -0.48
CACNA1A-220ENST00000635988 FAM122AQ96E09 287 aa12.08□□□□□ -0.48
CACNA1A-220ENST00000635988 SLC25A2Q9BXI2 301 aa12.08□□□□□ -0.48
CACNA1A-220ENST00000635988 CLCF1Q9UBD9 225 aa12.08□□□□□ -0.48
CACNA1A-220ENST00000635988 KBTBD11-OT1A0A1B0GTJ5 212 aa12.07□□□□□ -0.48
CACNA1A-220ENST00000635988 C17orf58Q2M2W7 97 aa12.07□□□□□ -0.48
CACNA1A-220ENST00000635988 MOB3BQ86TA1 216 aa12.07□□□□□ -0.48
CACNA1A-220ENST00000635988 NHLRC2Q8NBF2 726 aa12.07□□□□□ -0.48
CACNA1A-220ENST00000635988 OR9G1Q8NH87 305 aa12.07□□□□□ -0.48
CACNA1A-220ENST00000635988 SMIM12Q96EX1 92 aa12.07□□□□□ -0.48
CACNA1A-220ENST00000635988 LOC105371242A0A075B767 164 aa12.07□□□□□ -0.48
CACNA1A-220ENST00000635988 PEX7O00628 323 aa12.07□□□□□ -0.48
CACNA1A-220ENST00000635988 CRXO43186 299 aaPredicted RBP12.07□□□□□ -0.48
CACNA1A-220ENST00000635988 RNASE2P10153 161 aaKnown RBP12.07□□□□□ -0.48
CACNA1A-220ENST00000635988 MYOD1P15172 320 aa12.07□□□□□ -0.48
CACNA1A-220ENST00000635988 RPL8P62917 257 aaKnown RBP12.07□□□□□ -0.48
CACNA1A-220ENST00000635988 GDF5OSQ5U4N7 250 aa12.07□□□□□ -0.48
CACNA1A-220ENST00000635988 TMEM105Q8N8V8 129 aa12.07□□□□□ -0.48
CACNA1A-220ENST00000635988 ZNRF1Q8ND25 227 aa12.07□□□□□ -0.48
CACNA1A-220ENST00000635988 OR1L4Q8NGR5 311 aa12.07□□□□□ -0.48
CACNA1A-220ENST00000635988 TEX50A0A1B0GTY4 177 aa12.06□□□□□ -0.48
CACNA1A-220ENST00000635988 PSMB11A5LHX3 300 aa12.06□□□□□ -0.48
CACNA1A-220ENST00000635988 REG1BP48304 166 aa12.06□□□□□ -0.48
CACNA1A-220ENST00000635988 TMEM30BQ3MIR4 351 aa12.06□□□□□ -0.48
CACNA1A-220ENST00000635988 RNFT1Q5M7Z0 435 aa12.06□□□□□ -0.48
CACNA1A-220ENST00000635988 ZNF329Q86UD4 541 aa12.06□□□□□ -0.48
CACNA1A-220ENST00000635988 TMEM178AQ8NBL3 297 aa12.06□□□□□ -0.48
CACNA1A-220ENST00000635988 LEAP2Q969E1 77 aa12.06□□□□□ -0.48
CACNA1A-220ENST00000635988 PAXXQ9BUH6 204 aa12.06□□□□□ -0.48
CACNA1A-220ENST00000635988 HIGD1CA8MV81 97 aa12.05□□□□□ -0.48
CACNA1A-220ENST00000635988 DLL1O00548 723 aa12.05□□□□□ -0.48
CACNA1A-220ENST00000635988 COX7A2P2O60397 106 aa12.05□□□□□ -0.48
CACNA1A-220ENST00000635988 IGLV1-44P01699 117 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms