RNA–Protein interactions for RNA: ENST00000635970.1

CLN8-209, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-209ENST00000635970 C11orf53Q8IXP5 236 aa12.62□□□□□ -0.39
CLN8-209ENST00000635970 OR10G8Q8NGN5 311 aa12.62□□□□□ -0.39
CLN8-209ENST00000635970 ZDHHC16Q969W1 377 aa12.62□□□□□ -0.39
CLN8-209ENST00000635970 CDIPTO14735 213 aa12.61□□□□□ -0.39
CLN8-209ENST00000635970 MT-CO2P00403 227 aa12.61□□□□□ -0.39
CLN8-209ENST00000635970 HPRT1P00492 218 aa12.61□□□□□ -0.39
CLN8-209ENST00000635970 BRWD1-AS2P59051 145 aa12.61□□□□□ -0.39
CLN8-209ENST00000635970 MZT1Q08AG7 82 aa12.61□□□□□ -0.39
CLN8-209ENST00000635970 TEX43Q6ZNM6 134 aa12.61□□□□□ -0.39
CLN8-209ENST00000635970 OR5T1Q8NG75 326 aa12.61□□□□□ -0.39
CLN8-209ENST00000635970 Q8TCH9 128 aa12.61□□□□□ -0.39
CLN8-209ENST00000635970 TBX15Q96SF7 602 aa12.61□□□□□ -0.39
CLN8-209ENST00000635970 SMR3AQ99954 134 aa12.61□□□□□ -0.39
CLN8-209ENST00000635970 MARCH11A6NNE9 402 aa12.61□□□□□ -0.39
CLN8-209ENST00000635970 ZNF705FA8MVS1 300 aaPredicted RBP12.61□□□□□ -0.39
CLN8-209ENST00000635970 YPEL1O60688 119 aa12.61□□□□□ -0.39
CLN8-209ENST00000635970 HBZP02008 142 aa12.61□□□□□ -0.39
CLN8-209ENST00000635970 ZNF705DP0CH99 300 aaPredicted RBP12.61□□□□□ -0.39
CLN8-209ENST00000635970 ZNF705BP0CI00 300 aaPredicted RBP12.61□□□□□ -0.39
CLN8-209ENST00000635970 USF1P22415 310 aaPredicted RBP12.61□□□□□ -0.39
CLN8-209ENST00000635970 ATP5G3P48201 142 aa12.61□□□□□ -0.39
CLN8-209ENST00000635970 TMEM183BQ1AE95 376 aa12.61□□□□□ -0.39
CLN8-209ENST00000635970 COX19Q49B96 90 aa12.61□□□□□ -0.39
CLN8-209ENST00000635970 TMEM256Q8N2U0 113 aa12.61□□□□□ -0.39
CLN8-209ENST00000635970 YPEL2Q96QA6 119 aa12.61□□□□□ -0.39
CLN8-209ENST00000635970 MIEN1Q9BRT3 115 aa12.61□□□□□ -0.39
CLN8-209ENST00000635970 QTRT1Q9BXR0 403 aaKnown RBP12.61□□□□□ -0.39
CLN8-209ENST00000635970 IL36BQ9NZH7 164 aa12.61□□□□□ -0.39
CLN8-209ENST00000635970 ARL2-SNX15V9GYD0 113 aa12.61□□□□□ -0.39
CLN8-209ENST00000635970 C9JCJ5 164 aa12.6□□□□□ -0.39
CLN8-209ENST00000635970 RPLP1P05386 114 aaKnown RBP12.6□□□□□ -0.39
CLN8-209ENST00000635970 EGR1P18146 543 aa12.6□□□□□ -0.39
CLN8-209ENST00000635970 ADMP35318 185 aa12.6□□□□□ -0.39
CLN8-209ENST00000635970 Q0VG73 95 aa12.6□□□□□ -0.39
CLN8-209ENST00000635970 WDR82Q6UXN9 313 aa12.6□□□□□ -0.39
CLN8-209ENST00000635970 C5orf30Q96GV9 206 aa12.6□□□□□ -0.39
CLN8-209ENST00000635970 TIMD4Q96H15 378 aa12.6□□□□□ -0.39
CLN8-209ENST00000635970 IFNL4K9M1U5 179 aa12.6□□□□□ -0.39
CLN8-209ENST00000635970 IRF2P14316 349 aa12.6□□□□□ -0.39
CLN8-209ENST00000635970 HTD2P86397 168 aa12.6□□□□□ -0.39
CLN8-209ENST00000635970 LOXL1Q08397 574 aaPredicted RBP12.6□□□□□ -0.39
CLN8-209ENST00000635970 PRSS8Q16651 343 aa12.6□□□□□ -0.39
CLN8-209ENST00000635970 GCSAMQ8N6F7 178 aa12.6□□□□□ -0.39
CLN8-209ENST00000635970 OR52L2PQ8NGH6 319 aa12.6□□□□□ -0.39
CLN8-209ENST00000635970 UBALD1Q8TB05 177 aa12.6□□□□□ -0.39
CLN8-209ENST00000635970 RBFOX2O43251 390 aaKnown RBP eCLIP12.59□□□□□ -0.391e-7■■■□□ 14.8
CLN8-209ENST00000635970 CRISP2P16562 243 aa12.59□□□□□ -0.39
CLN8-209ENST00000635970 LRRC29Q8WV35 223 aa12.59□□□□□ -0.39
CLN8-209ENST00000635970 C11orf52Q96A22 123 aa12.59□□□□□ -0.39
CLN8-209ENST00000635970 RNF7Q9UBF6 113 aa12.59□□□□□ -0.39
CLN8-209ENST00000635970 TRAV38-1A0A0B4J264 116 aa12.58□□□□□ -0.4
CLN8-209ENST00000635970 PSPNO60542 156 aa12.58□□□□□ -0.4
CLN8-209ENST00000635970 UBE2G2P60604 165 aa12.58□□□□□ -0.4
CLN8-209ENST00000635970 ZNF90Q03938 601 aa12.58□□□□□ -0.4
CLN8-209ENST00000635970 TREML4Q6UXN2 200 aa12.58□□□□□ -0.4
CLN8-209ENST00000635970 OR5AU1Q8NGC0 362 aa12.58□□□□□ -0.4
CLN8-209ENST00000635970 ATG101Q9BSB4 218 aa12.58□□□□□ -0.4
CLN8-209ENST00000635970 ARL14EPLP0DKL9 152 aa12.58□□□□□ -0.4
CLN8-209ENST00000635970 AREGP15514 252 aa12.58□□□□□ -0.4
CLN8-209ENST00000635970 EDDM3BP56851 147 aa12.58□□□□□ -0.4
CLN8-209ENST00000635970 TPTE2P1Q5T6R2 138 aa12.58□□□□□ -0.4
CLN8-209ENST00000635970 ZNF705AQ6ZN79 300 aaPredicted RBP12.58□□□□□ -0.4
CLN8-209ENST00000635970 DEFB108BQ8NET1 73 aa12.58□□□□□ -0.4
CLN8-209ENST00000635970 UHRF2Q96PU4 802 aa12.58□□□□□ -0.4
CLN8-209ENST00000635970 GNB1LQ9BYB4 327 aa12.58□□□□□ -0.4
CLN8-209ENST00000635970 NPVFQ9HCQ7 196 aa12.58□□□□□ -0.4
CLN8-209ENST00000635970 PPIAL4EA0A075B759 164 aa12.57□□□□□ -0.4
CLN8-209ENST00000635970 TRGV10A0A0A0MS01 117 aa12.57□□□□□ -0.4
CLN8-209ENST00000635970 PPIAL4DF5H284 164 aa12.57□□□□□ -0.4
CLN8-209ENST00000635970 DLEU1O43261 78 aa12.57□□□□□ -0.4
CLN8-209ENST00000635970 SPINT2O43291 252 aa12.57□□□□□ -0.4
CLN8-209ENST00000635970 LHBP01229 141 aa12.57□□□□□ -0.4
CLN8-209ENST00000635970 MT-ND6P03923 174 aa12.57□□□□□ -0.4
CLN8-209ENST00000635970 LINC00614P0C842 121 aa12.57□□□□□ -0.4
CLN8-209ENST00000635970 PPIAL4FP0DN26 164 aa12.57□□□□□ -0.4
CLN8-209ENST00000635970 ZNF25P17030 456 aaPredicted RBP12.57□□□□□ -0.4
CLN8-209ENST00000635970 RPL29P47914 159 aaKnown RBP12.57□□□□□ -0.4
CLN8-209ENST00000635970 KRTAP1-1Q07627 177 aa12.57□□□□□ -0.4
CLN8-209ENST00000635970 ZNF114Q8NC26 417 aa12.57□□□□□ -0.4
CLN8-209ENST00000635970 OCC1Q8TAD7 63 aa12.57□□□□□ -0.4
CLN8-209ENST00000635970 DERL1Q9BUN8 251 aa12.57□□□□□ -0.4
CLN8-209ENST00000635970 PPIAL4AQ9Y536 164 aa12.57□□□□□ -0.4
CLN8-209ENST00000635970 TEP1Q99973 2627 aaKnown RBP12.57□□□□□ -0.4
CLN8-209ENST00000635970 TRBV20OR9-2A0A075B6H5 130 aa12.56□□□□□ -0.4
CLN8-209ENST00000635970 IGHV3OR15-7A0A075B7D8 119 aa12.56□□□□□ -0.4
CLN8-209ENST00000635970 NUPR1O60356 82 aa12.56□□□□□ -0.4
CLN8-209ENST00000635970 LMO4P61968 165 aa12.56□□□□□ -0.4
CLN8-209ENST00000635970 RAB31Q13636 194 aa12.56□□□□□ -0.4
CLN8-209ENST00000635970 WDR73Q6P4I2 378 aa12.56□□□□□ -0.4
CLN8-209ENST00000635970 TOMM20LQ6UXN7 152 aa12.56□□□□□ -0.4
CLN8-209ENST00000635970 OR4A16Q8NH70 328 aa12.56□□□□□ -0.4
CLN8-209ENST00000635970 GGTLC1Q9BX51 225 aa12.56□□□□□ -0.4
CLN8-209ENST00000635970 MRPL18Q9H0U6 180 aaKnown RBP12.56□□□□□ -0.4
CLN8-209ENST00000635970 GSX1Q9H4S2 264 aaPredicted RBP12.56□□□□□ -0.4
CLN8-209ENST00000635970 LINC00473A8K010 186 aa12.56□□□□□ -0.4
CLN8-209ENST00000635970 SRRM5B3KS81 715 aa12.56□□□□□ -0.4
CLN8-209ENST00000635970 PRSS46E5RG02 174 aa12.56□□□□□ -0.4
CLN8-209ENST00000635970 FNDC10F2Z333 226 aa12.56□□□□□ -0.4
CLN8-209ENST00000635970 IGHV4-31P0DP07 118 aa12.56□□□□□ -0.4
CLN8-209ENST00000635970 KIR2DS2P43631 304 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms